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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pral5598g00020
ATGATTAGTGGAGGTGATGCTCCAAAAATGCCCAAAGGTCGGCGGTCCATGTTTGCAGTTGAAGAAGCAAGTTGCAAAGGTGAGGTTGGAGGAGACATACCTCTGAAGAAAGGCCCTTGGACAGCAGCAGAGGATGCAATTTTAATAGATTATGTCAAAAAACATGGAGAAGGAAATTGGAATGCAGTCCAAAAGCACTCAGGCCTTGCCCGCTGTGGAAAAAGCTGCCGTTTACGATGGGCAAATCACTTGAGGCCAGAATTAAAAAAGGGTGCATTTACTGAAGAGGAGGAGCGTCGAATCATTGAGCTCCATGCTAGGATGGGAAACAAATGGGCTCGAATGGCAACAGAGTTGCCTGGACGTACAGATAATGAGATAAAGAATTACTGGAACACTAGAATTAAGAGACTGCAACGAGCTGGATTACCAATTTATCCTCCTGACATATGCCAGCGGGTACGCAGTCAAGAAAATCCAAATATGAGTACTTTGATGAGTGGAGCCAGCCAACACTCTGATATCCCGCAAGGAGGCAACTTCAAAGTCCCAGAACTGGATTTCAAAGAATATGATTTCAGTCGGAGTTATCTCCCATATGGTCCATCTATTTTAGATATTCCTGACAGCAGTCTGTTTGAACAAACTGTAGGCCCACCACATAGTGATGTTATGTTGTTCGGAAACCCTCCGAAACGCCTTAGGGAGTCAGATATGCTTTATAATAGATTGGACAATAGTAGCAGCTGTATGATCCCAGTGTTTGATAAGTTTGTGGATTATACTGCTGAGCCACCTCCTGTTTTGCCGTCTCCAGGCAATCTGTCCCTTGACACCAATGATCCGTTTCATGGTGATAATCTTCATGGCAGCCATGCCGCTTTAAATGGCACTATCTCTTCTTCAGCGCCCATATCTGAGGCAATGAAGTTGGAGCTCCCTTCACTCCAATATTTAGAAACTCAACAAGGTAGCTGGGATGCAAATGCATCCCCACTTCCTTCACTTGAGTCCGTTGATACATTGTTTCAGTCTTCTCCTGTTGAACAATACCAGTCATGTACTGTTACTCCAGATAGTAGTGGTTTGTTAGAATCAATAATCTACGACACCAAGCTTCCCAAGGGCCCATACAATGATTCGTTGTGGAAGACTCCTGATGACTGCATACTGAATATGGCTAAAACTGAGACAGAATGGGACCACCATGGGGATACAAATTCACCCTTAGGTCACTCTTCTGCCTCAGTTCTTACAGATTATACTCCTCCTGTTAGCTTCTGCTCAGTTGATGAACCCAACTTCATTGAACATGCAAAAGCAGGTCTTGAAATGAAGCAGGAAGTAATTTCACAGGGTCCACCTAACGTTTCTCAAAGGAAAGAAACTTCTAGTCAGATAGACATAACAAGGCCAGATGCTTTGCTTGACATGTGTTGGTTCGGCAATGACACCAGTTACCGCTAA
1467
0.441
MISGGDAPKMPKGRRSMFAVEEASCKGEVGGDIPLKKGPWTAAEDAILIDYVKKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPELKKGAFTEEEERRIIELHARMGNKWARMATELPGRTDNEIKNYWNTRIKRLQRAGLPIYPPDICQRVRSQENPNMSTLMSGASQHSDIPQGGNFKVPELDFKEYDFSRSYLPYGPSILDIPDSSLFEQTVGPPHSDVMLFGNPPKRLRESDMLYNRLDNSSSCMIPVFDKFVDYTAEPPPVLPSPGNLSLDTNDPFHGDNLHGSHAALNGTISSSAPISEAMKLELPSLQYLETQQGSWDANASPLPSLESVDTLFQSSPVEQYQSCTVTPDSSGLLESIIYDTKLPKGPYNDSLWKTPDDCILNMAKTETEWDHHGDTNSPLGHSSASVLTDYTPPVSFCSVDEPNFIEHAKAGLEMKQEVISQGPPNVSQRKETSSQIDITRPDALLDMCWFGNDTSYR
488
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pral5598g00020
488
FunFam
Transcription factor GAMYB
92
138
-
-
Pral5598g00020
488
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
32
84
IPR017930
-
Pral5598g00020
488
ProSiteProfiles
Myb-like domain profile.
32
84
IPR001005
-
Pral5598g00020
488
SUPERFAMILY
Homeodomain-like
34
131
IPR009057
-
Pral5598g00020
488
CDD
SANT
39
84
IPR001005
-
Pral5598g00020
488
Gene3D
-
92
161
-
-
Pral5598g00020
488
PANTHER
TRANSCRIPTION FACTOR MYB33-RELATED
24
485
-
-
Pral5598g00020
488
Gene3D
-
36
89
-
-
Pral5598g00020
488
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
85
139
IPR017930
-
Pral5598g00020
488
SMART
sant
36
86
IPR001005
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pral5598g00020
Pral-Chr5598
293386
300446
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pral5598g00020
23
481
MYB Transcription Factor Family
AT5G06100
37.657
2.96e-84
267
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB
Pral5598g00020
Myb_DNA-binding
7.9e-15
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pral5598g00020
K09422
-
qsa:O6P43_014646
568.54
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