Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5598g00017 ATGGTTCAAGAACTTCGATGCTTTATTTTGTCACCGAATTTGTTACATATTTCTGTGATCCCCTTTTTCCAGGCAAAGCCTCTTCTTGGAGGGAAGAAGTACGCCCAACTGGTGGATACTAAAATCAGCAGCTCCTACAAAGAAGACCAACTTAAATGGTTGGTCCAAGTAACAGAACAATGTCTCAGAAAGAATCCCAAGGAAAGATCAAGCATGAATGTGGTTGTCTCCGCATTACAAGGCATTGAAGATACTGATGATTTATGTGCAGTTGAAGACTCTTCTGCAGAAAAATCATCTATACAGCTGTCTGTTCCTGATATGACCTGCTCACAAGGTCTCAGAAATGCGTATAAGCAGAATCCGGATGAAGAACAGATCAGCAATATTCACATGATGTATCACATGAAAGATGATCAGATAAGCCAGGACCAGAACTGTACAGAAGGAAGCCTCCAAATAGAAAAGAGGGGCACAAGACTCACAACTTTGAGTAACCAAATTGCAAGAGAAAATAACGATGAAGAACAAACTCAGTGTAGCTTTTGCGGAGATTCATTGGATAATTGCAAAGTCAAAGTCACGTTAAAGGATTCCAAATCTTCTGTATGCTCTGTCTGCAAAAGTAAACGTCCTCATTTTGGGTGGCAAAAGGATTTCTCTTATGATGAACTCCATATGGCTACTGATGGGTTTTCAATTAAGAACTCTCTAACTGAAGGTGTATATGGACCTTCGTTCAGAGGCCAGCTGAAGTGCAATCTGAAAATAGTTATCAAGCAACTTCAAATGACAAGCTCTCAGGAAGAGAAGATATTTAAGTCAGAAGTTCAGTTCCTCTTTAACGCTAGACATGAAAATGTGGTCATGTTGTTGGGTTCATGCATAGATAAAACTAGATTGCTGATTGTATACGACTATGCATGCAATGGTTCGCTTGACCAGCATTTATCAGGACAAAGTTGCAGATCACTGACATGGAGAGAGAGGGTGAAAATAGCAATAGGTTTATCCAGAGGTCTAAAGTATTTGCATGAGAAGAATACAATTCATGGAAGTATAAAACCAAGTAACATTCTTCTAACTCATGATTTTGAAGCGCTGGTAGGAGATTTTGGATTTGGAAAATCCAAAAATGAATTGAAGAATTGGAGCAAGAAGAAAATGGTTGAGAATACTGGATACGAGGCTCCAGAACTTTTGGAGAGTGGAAAATTCTCAACTAAGGCAGATGTGTACTCTCTTGGTGTGGTTCTTTTAGAGCTGATCACCGGGCACAGGGTTATGGATAAAGTTTCAGGGAAGAAAAGTCTTATTGACTGGGCAAAGCCACTTCTCAGAGGAAGGACTTACCCACAATTGGTGGATCCAAAAATCGGCAGCTCCTACGATGATCAAGAGCTTTTTTCATTGGTCCAAGTTATCTCTGCATTGCCATGCATAGTTGAGAACAAACCTCCTTTAACTGAGGACCCCTTGATAGAAAAGCCACACTTCAAACGCCCTTTGAAAGATGAATCTGGCTCACAAGATCTCAGAGTATCACCACATGCAGCTAATTCAGAGGTATTTAATCAGTGA 1581 0.4016 MVQELRCFILSPNLLHISVIPFFQAKPLLGGKKYAQLVDTKISSSYKEDQLKWLVQVTEQCLRKNPKERSSMNVVVSALQGIEDTDDLCAVEDSSAEKSSIQLSVPDMTCSQGLRNAYKQNPDEEQISNIHMMYHMKDDQISQDQNCTEGSLQIEKRGTRLTTLSNQIARENNDEEQTQCSFCGDSLDNCKVKVTLKDSKSSVCSVCKSKRPHFGWQKDFSYDELHMATDGFSIKNSLTEGVYGPSFRGQLKCNLKIVIKQLQMTSSQEEKIFKSEVQFLFNARHENVVMLLGSCIDKTRLLIVYDYACNGSLDQHLSGQSCRSLTWRERVKIAIGLSRGLKYLHEKNTIHGSIKPSNILLTHDFEALVGDFGFGKSKNELKNWSKKKMVENTGYEAPELLESGKFSTKADVYSLGVVLLELITGHRVMDKVSGKKSLIDWAKPLLRGRTYPQLVDPKIGSSYDDQELFSLVQVISALPCIVENKPPLTEDPLIEKPHFKRPLKDESGSQDLRVSPHAANSEVFNQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5598g00017 526 MobiDBLite consensus disorder prediction 489 511 - -
Pral5598g00017 526 ProSiteProfiles Protein kinase domain profile. 232 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5598g00017 526 MobiDBLite consensus disorder prediction 489 526 - -
Pral5598g00017 526 PANTHER OS01G0253100 PROTEIN 25 86 - -
Pral5598g00017 526 Gene3D Phosphorylase Kinase; domain 1 204 307 - -
Pral5598g00017 526 Gene3D Transferase(Phosphotransferase) domain 1 15 103 - -
Pral5598g00017 526 Gene3D Transferase(Phosphotransferase) domain 1 309 486 - -
Pral5598g00017 526 Pfam Protein tyrosine and serine/threonine kinase 234 433 IPR001245 GO:0004672|GO:0006468
Pral5598g00017 526 FunFam Proline-rich receptor-like protein kinase PERK8 194 307 - -
Pral5598g00017 526 SUPERFAMILY Protein kinase-like (PK-like) 214 436 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5598g00017 Pral-Chr5598 268899 272922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5598g00017 220 477 Trihelix Transcription Factor Family AT5G38560 43.494 7.01e-64 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pral5598g00017 PK_Tyr_Ser-Thr 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5598g00017 - - pcin:129302218 747.658