Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5598g00016 ATGGCCGTCACCTTCTCAGATCTCCGCACGGAATCAGGACTCAAGTCCCTCAATGAATTCCTCTCTGGCAAGACCTACATATCTGGGGATCAGTTGACCAAGGATGACATTAAAGTCTATGCCTTTGTAAAGAACCCGAGCGACGCTTTTCCGAATGCCAGCAAGTGGTACGATGCCGTCTCTTCACGTCTTGTTGAAAGCTTCCCTGGAAAAGCTCAAGGGGTGAGTTTCAGTGGCCAGGCTGCTTCAGCTGAAGCTGCACCTGCCAAGCCGGCTGGTGCTGATGACGATGATGACCTTGACCTCTTTGGTGATGAGACAGAGGAAGAAAAGGCCGCAGCAGAGGCAAGGGAGGCTACTAAAAAGGAATCCTCCAAGAAGAAAGAGAGTGGGAAGTCCTCTGTTCTGCTTGATGTGAAGCCTTGGGATGATGAGACAGACATGAAGAAGCTTGAAGAGGCTGTTCGTTCGATTCAGATGCCTGGGCTTCTGTGGGGAGCATCCAAACTAGCTCCTGTTGGTTACGGTATTAAGAAGATGCAGATAATGATGACCATTGTTGACGACCTTGTCTCTGTGGATTCCCTTATTGAGGAACAGCTTACAGTGGAGCCATGCAGTGAGTATATTCAGAGTTGTGACATTGTTGCGTTCAACAAAATCTAA 666 0.4865 MAVTFSDLRTESGLKSLNEFLSGKTYISGDQLTKDDIKVYAFVKNPSDAFPNASKWYDAVSSRLVESFPGKAQGVSFSGQAASAEAAPAKPAGADDDDDLDLFGDETEEEKAAAEAREATKKESSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIQMPGLLWGASKLAPVGYGIKKMQIMMTIVDDLVSVDSLIEEQLTVEPCSEYIQSCDIVAFNKI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5598g00016 221 FunFam Elongation factor 1-beta 1 like 126 221 - -
Pral5598g00016 221 Gene3D - 125 221 IPR014717 -
Pral5598g00016 221 Gene3D - 3 73 - -
Pral5598g00016 221 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 221 - -
Pral5598g00016 221 MobiDBLite consensus disorder prediction 79 133 - -
Pral5598g00016 221 MobiDBLite consensus disorder prediction 107 133 - -
Pral5598g00016 221 SUPERFAMILY eEF-1beta-like 129 221 IPR036219 -
Pral5598g00016 221 SUPERFAMILY GST C-terminal domain-like 9 64 IPR036282 -
Pral5598g00016 221 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 210 221 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pral5598g00016 221 SMART EF1_GNE_2 132 221 IPR014038 GO:0003746|GO:0006414
Pral5598g00016 221 Pfam EF-1 guanine nucleotide exchange domain 134 221 IPR014038 GO:0003746|GO:0006414
Pral5598g00016 221 CDD EF1B 135 221 IPR014038 GO:0003746|GO:0006414
Pral5598g00016 221 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 96 104 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5598g00016 Pral-Chr5598 249166 251349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5598g00016 1 221 Eukaryotic Initiation Factors Gene Family AT5G12110 72.368 3.44e-104 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5598g00016 K03232 - gmx:100500082 296.204