Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5598g00013 ATGGAAAAAGATGAATCTCTTGAGCTTTTTTCCAAGAAAGCATTTAAGAAAGATCATCCTGAAGATGATTATTTTGTTTTGTCAGAAATTGTGGTTAAATATGCAGGAGGTGTTCCTTTGGCACTCTATGTTTTAGGCTCCTTACTATGTGGCAGAAGTCTCCTTGAGTGGGAAGAAACTTTAGAAAGGATGAAGCACATTCCAGATAAAGATATTTTTCAAATTCTTAAAGTAAGTTATCTCGGATTGAATGATGAAGAAAAGGCAATTTTTTTAGATATTGCTTGCTTCTTCAATGGATGGAAAAGAGATGAAGTAGCTCAAATTTTGAAAAATTGTGATCTTCATCCAACTATTGGAATAAATATTTTGATTGAAAGAGCTCTCTTGATTGAGAAGAAGACATTTGATGGAGAAACCGTATTAGGGGTCCATGATCTACTTCAAGAATTAGCCAGGAGTATTGTTTTTCAAGAATCTCCTGGTCATGTTCATGGACGAAGTAGGTTGTGGAATCTAGAAGACATCCATGAAGTATTGGAAAATGATAAAGGATCTGAAGCAATACAAGCTATGGCTTTGCCTTTTAACCTAGATAGAAAAATACAAGTACATCGTGACGCCTTCTCAAAGATGTATAATCTAAGGTTGCTCATCATATCAAGTGAAGTGAAACTTCATAGTGGTCTCAAATGCTTTTCTAGCACATTAAAGGTTATTCGATGGAGGTTGTATCCTCTAGAAACTCTTCCGATTGGAACTCAGTTGGATAAACTTGTCGACATTCAAATGCCTTTTAGCAAAATAAAACTCTGTGATGGCATGCAGCTTATGAAGAAGTTGAAGTTTATTGATCTAAGCAATTCCAAACATTTGGTTGAAACCCCAGACTTCTCAGAAATTCCAAACCTGGAAAAATTGAATCTTGAAGGGTGCTCATCTCTCATTACGGTTCATCATTCACTTGGAGAGTTGAAAAAGCTTGTTGAAGTGAACTTGTCGTGTTGTACCAGTCTTGAGATCCTTCCGAAAATATTGGAAATGAACTCTTTGATAAAGTTAGATATTAGTTGGTGCGATAAACTTTCAACTCTTCCAGAATTCGGGGAATGCATGAAAAAATTAACAGTGCTTGATGCAAGGAAAACTGCTATAACCAAACTTCCAGAATCGCTTGGATTCTTGTCTGGTCTTAGAGATTTGAATCTAAGGGGCCCCCGAAAACTTGTTCTTCAAATGCAGTTTGTCATCATTAATTACTTTACGCCTGGAAGGAAATGA 1281 0.3614 MEKDESLELFSKKAFKKDHPEDDYFVLSEIVVKYAGGVPLALYVLGSLLCGRSLLEWEETLERMKHIPDKDIFQILKVSYLGLNDEEKAIFLDIACFFNGWKRDEVAQILKNCDLHPTIGINILIERALLIEKKTFDGETVLGVHDLLQELARSIVFQESPGHVHGRSRLWNLEDIHEVLENDKGSEAIQAMALPFNLDRKIQVHRDAFSKMYNLRLLIISSEVKLHSGLKCFSSTLKVIRWRLYPLETLPIGTQLDKLVDIQMPFSKIKLCDGMQLMKKLKFIDLSNSKHLVETPDFSEIPNLEKLNLEGCSSLITVHHSLGELKKLVEVNLSCCTSLEILPKILEMNSLIKLDISWCDKLSTLPEFGECMKKLTVLDARKTAITKLPESLGFLSGLRDLNLRGPRKLVLQMQFVIINYFTPGRK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5598g00013 426 Pfam NB-ARC domain 1 65 IPR002182 GO:0043531
Pral5598g00013 426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 94 IPR027417 -
Pral5598g00013 426 Gene3D Ribonuclease Inhibitor 172 416 IPR032675 -
Pral5598g00013 426 SUPERFAMILY "Winged helix" DNA-binding domain 71 181 IPR036390 -
Pral5598g00013 426 SUPERFAMILY L domain-like 199 406 - -
Pral5598g00013 426 PRINTS Disease resistance protein signature 35 49 - -
Pral5598g00013 426 PRINTS Disease resistance protein signature 276 292 - -
Pral5598g00013 426 Gene3D - 1 84 IPR042197 -
Pral5598g00013 426 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 375 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5598g00013 Pral-Chr5598 239155 240741 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5598g00013 24 409 WRKY Transcription Factor Family AT4G12020 34.577 5.67e-54 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5598g00013 - - pcin:129301634 498.434