Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5598g00009 ATGAGTAACCTTAGGCTCTTCTTATGTACGACACTTGACAATCCGTTCATCTTCCCAAGTGAATGGAAATTTTTGGCTGGTGCATTAAAAGTTGTTATGTGGCAATATTCTCCTTTGAAAGCTCTTCCACTTGAAACTCAATTGAATGGACTTGTTGAAATGGATATGTCAGATAGCAAAATAAAACAACTTTGGAGCAACAAACAGCGCATGACAAAGTTGAAATCTATCGTATTGGAAGACTCTATCAATTTGACTGAAACTCCAGACTTCTCAGGTGCTCCAAATTTAGAAGATTTACGTCTTGGTGGATGCATATCTCTTGTCAAGGTTCATTCCTCCCTTGGACAATTGGAAAAGCTTGTTAACGTGGACATGAATGAATGTTTAAGCCTTGAAATCCTACCAGAAAAACTGGAAACAAATTCTTTGGTGAAGTTAAACCTTAGGGAGTGTATAAAAGTTGCAAAGCTCCCGGAGTTTGGGGAAGGTATGAAAAAACTATCATATCTTAATGTGGATGATACTTCTATAACTAGACTTCCTGAATCAATTGGATCCTTGACGGGTCTTGAATATTTAAATTTGCGCGGCCGCAAAATTGAAAATCTTTCTGGCTGGAATGTAACGTCCTTAACAGAGTTATATTTAAGCAAGTGTGGCTTAGACGATGGATCAATTCCTGATTTTGACAGTTTATCATTGCTCACTGTATTGGATATAAGCTTTAATGATTTTGAGAATCTACCCGACTTGTGTGGTCTTTCTCGACTTGTCTTCCTTTCATTGGATTACTGCAGAAGGCTTAAGTTGTTGCCAAGGCTCCCACCACGATTAATTCGATTACATGCCTTCGGTTGTGATTTAATGGAACCATTATCATCAGATAGACAATTATGGGATTTGGTTGCTTCACTTGACCATGAGTGTCGTGGGCGAACTAAATATGAAATCTATAATGATGGGGAGGAAGATTGGGACGAAGTTGTTCCTTCTGTGCTATTAAAGGGAGCTAAATGGCCTTCTCCGCTGACAGATTTCTGTGCAAGTCTTCCAGGATGCGAAATACCATCATGGTTTCCAAATAAAGAACATTGCCATTTGGATATGTGGGGTAGGAAATATGAGATTGAAGTGGACATGCCTCCATATTTTCGTGACAGTGAATGGTGCGGAATTGTTGTGTGCTTCCGTATGTCAGGTTACGGTGAGGGTTCTTGTGACTTTAGTTGGAGTAGTAAAGCTGCACCAGATGATGATCATTATGCACCCAAAGAGTGGGAGTGTGATATTCCTTCCTCCCTTTACGAAAAGCATTGCATAATAATGGTGTTGGAATTAAATGAGGAAACATGTTGGCGGCACCTAAGAGCTCGTCATAACAATTCCCTTCACATTCTATTTTCTTTTGCATCACGTGATCAAGATTATTGGGAAGCAGAGGAATGTGGGTGGAGAGTGATACGTAAAGAAGAGATACAAGATTGGCGCCATCTAAATGGTTTCTTCAACCAAGCCAACCAACCCCAGCTTGCTTCTTCTGATGAGGTCAAGCTTCCGCTGAGAGCATTTGAAGAATTCTTTATGGGGGAGTATTTGACTTACTGA 1608 0.4005 MSNLRLFLCTTLDNPFIFPSEWKFLAGALKVVMWQYSPLKALPLETQLNGLVEMDMSDSKIKQLWSNKQRMTKLKSIVLEDSINLTETPDFSGAPNLEDLRLGGCISLVKVHSSLGQLEKLVNVDMNECLSLEILPEKLETNSLVKLNLRECIKVAKLPEFGEGMKKLSYLNVDDTSITRLPESIGSLTGLEYLNLRGRKIENLSGWNVTSLTELYLSKCGLDDGSIPDFDSLSLLTVLDISFNDFENLPDLCGLSRLVFLSLDYCRRLKLLPRLPPRLIRLHAFGCDLMEPLSSDRQLWDLVASLDHECRGRTKYEIYNDGEEDWDEVVPSVLLKGAKWPSPLTDFCASLPGCEIPSWFPNKEHCHLDMWGRKYEIEVDMPPYFRDSEWCGIVVCFRMSGYGEGSCDFSWSSKAAPDDDHYAPKEWECDIPSSLYEKHCIIMVLELNEETCWRHLRARHNNSLHILFSFASRDQDYWEAEECGWRVIRKEEIQDWRHLNGFFNQANQPQLASSDEVKLPLRAFEEFFMGEYLTY 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5598g00009 535 Gene3D Ribonuclease Inhibitor 9 162 IPR032675 -
Pral5598g00009 535 Gene3D Ribonuclease Inhibitor 163 304 IPR032675 -
Pral5598g00009 535 ProSiteProfiles Leucine-rich repeat profile. 235 256 IPR001611 GO:0005515
Pral5598g00009 535 PANTHER LEUCINE-RICH REPEAT-CONTAINING 157 332 - -
Pral5598g00009 535 SUPERFAMILY L domain-like 2 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5598g00009 Pral-Chr5598 230846 232746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5598g00009 1 261 WRKY Transcription Factor Family AT4G12020 33.808 3.04e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5598g00009 - - pcin:129303275 432.565