Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5598g00006 ATGACAAAGTTGAAATCTATCGTATTGGAAAAGTCTCTCAATTTGACCGAAAGTCCAGACTTCTCAGGTGCTCCAAATTTAGAACATTTACATCTTGGTGGATGCACATCTCTTGTCAAGGTTCATCCCTCCCTTGGACAGTTGGGAAAGCTTGTTGAGGTGGACTTGAATCATTGTGCAAACCTTGAAATCCTACCAAAAAGATTGGAAACAAATTCTTTGGTGAAGTTAAACCTTAGGGGGTGTAAAAAAGTTGCAAAGCTCCCAGAGTTTGGGAAAGGTATGGAAAAACTATCATATCTTGATGTGGGTGCTACTTCTATAACTAGACTTCCTGAATCAGTTGGATCCTTGACGGGTCTTGAATATTTAAATTTGAGTGGCTGTAAAATTGAAAATCTTGACAAGTCGTTGAAGACTCACATAAGTCACCAAATTTCCGGCTTGAATGTAATGTCATTAACGGAGTTATACTTAAGCGGGTGTGGCTTAGATGATGGATCGATTCCTGATTTTGACAGTTTATCATCGCTCATTGTATTGGATCTAAGCGGTAATGATTTTGAGAATCTACCCATTGGTTGCTTCTCTGGTCTTTCTCGACTTGTCTTCCTTTCATTGAATCACTGCAAAAGGCTTAAGTCATTGCCAAGGCTCCCACCACGATTAATTCGATTACATGCCTCTGGCTGTGATTTAATGGAACCATTATCATCAGATGGACAGTTATGGAATTTGGTTGCTTCACTTGACCATGAGCGTCGTGGGCGAACTAGATGTCAAGTCGATGATGATTGGGATGAAGATGGGGAGGAATATGTTCCTTCTGTGCTATACAAGGGAGCTAAATGGCCTCCCCAGCTGAGAGATTTCTGCGCAAGTCTTCCAGGATGTGAAATGCCATCATGTTTTCCAAATAAAGAAGATTGCCATTTGGATATGTTGGGAAGGAAATATGAGATTGAGGTGGACATGCCTCCATATTTTCGTGACAGTGAATGGTGCGGAATTGTTGTGTGCTTCCGTATGTCAGGTTACGGTGATGGTTTTTGGGACGTTGGTTGGAGTGGTAAAGCTGCAGAAGGTGATGATGATTATATACTCGAAGAGTGGGAGTGTGATATTCCTTTCTCCTTTTCCGAAAAGCAGTGCATAATAATGGTGTTGGAATTAAATGAGGAAACATGTTGGTGGCACCTAAGAGCTCATCATAGCAATTCCCTTCGCATTCTATTTTCTGCTTACGCTGAAGGTTGGGATTGCGATTGGGAAGTAAAGGAATGTGGGTGGAGAGTGATTTGTAAAGAAGAGATACAAGATTGGTGCCATCCCAATGGTTTCTTCAACCAAGCCACCCAACCCCAGCTTGCTTCTTCTGATGAGGTCAAGCTTCCGCTGAGAGCACTTGTAGACTTCTTTTTGGGGGAGGAGCATTTGACTGGCTGA 1446 0.4219 MTKLKSIVLEKSLNLTESPDFSGAPNLEHLHLGGCTSLVKVHPSLGQLGKLVEVDLNHCANLEILPKRLETNSLVKLNLRGCKKVAKLPEFGKGMEKLSYLDVGATSITRLPESVGSLTGLEYLNLSGCKIENLDKSLKTHISHQISGLNVMSLTELYLSGCGLDDGSIPDFDSLSSLIVLDLSGNDFENLPIGCFSGLSRLVFLSLNHCKRLKSLPRLPPRLIRLHASGCDLMEPLSSDGQLWNLVASLDHERRGRTRCQVDDDWDEDGEEYVPSVLYKGAKWPPQLRDFCASLPGCEMPSCFPNKEDCHLDMLGRKYEIEVDMPPYFRDSEWCGIVVCFRMSGYGDGFWDVGWSGKAAEGDDDYILEEWECDIPFSFSEKQCIIMVLELNEETCWWHLRAHHSNSLRILFSAYAEGWDCDWEVKECGWRVICKEEIQDWCHPNGFFNQATQPQLASSDEVKLPLRALVDFFLGEEHLTG 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5598g00006 481 Pfam Leucine rich repeat 153 211 IPR001611 GO:0005515
Pral5598g00006 481 SUPERFAMILY RNI-like 2 235 - -
Pral5598g00006 481 Gene3D Ribonuclease Inhibitor 92 252 IPR032675 -
Pral5598g00006 481 Gene3D Ribonuclease Inhibitor 1 91 IPR032675 -
Pral5598g00006 481 PANTHER LEUCINE-RICH REPEAT-CONTAINING 108 316 - -
Pral5598g00006 481 SMART LRR_typ_2 118 141 IPR003591 -
Pral5598g00006 481 SMART LRR_typ_2 95 117 IPR003591 -
Pral5598g00006 481 SMART LRR_typ_2 175 198 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5598g00006 Pral-Chr5598 144281 145904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5598g00006 1 205 WRKY Transcription Factor Family AT4G12020 34.928 1.37e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5598g00006 - - pcin:129303275 436.802