Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5598g00004 ATGGCACATGGTGCTAGAGGAGAATCTTCTTCCAGCTCTGATCCTTGTAATTCAACTCATAACTGGAAATATGATGTGTTCTTGAGTTTTAGAGGGAAAGACATTCGCTTGAAGTTTCTGGATCACTTAGATAAAGCTTTGGAAAGAAGTGGCATCAAAACGTTTAAGGATGATAAAGATCTTGAGAGAGGGGGAGTTATAAAACAAGATTTGTTTCAAGCAATCGAGGATTCTCTCTGTGCAGTTGTTGTTGTCTCTGAAAATTATGCAAAATCTACGTGGTGTTTAGAGGAGCTTCAAAAGATCCTTGAAGCTTCAAAAATATTGGATCGACGGGTTTTTCCCATATTCTATGATGTTGATCCAGCCGATGTAAGACACCAACGAAAACGCTTTCGGGAAGCCATGGATGAACATGAAGACAGATTCAGAGAGGACAATGTGAAAGTGCAGACTTGGAGAAGTGCATTGTGTGAAATTGCCAACTTGTCTGGTTGGGACACTAGGGGCAGGCCTGAAGCAGATCTTATAGAAAAAATAGTCACAGATGTACGGGCTTACATAATTCCTAAATTACCATCTCATGTTGACAATCTAGTTGGGATTGAGTCAAGAGCACGTGATATAATGTCTCTCTTGGAGATTGGGTTGGATGACAGACGTTTTGTAGGGATATGGGGTATGGGCGGGGTGGGTAAAACAACTCTTGCTAGAGCAACGTCGTCTCTTTGCAAAAAAGCTTCTTTCTCATCTCCAAATAAAAGACAAGATGATGATGAATACGAAGGAATGAAGATGATAAGAAAGCTTCTCTGCAGTAAAAAGGTTCTTCTAGTCATTGATGATGTAGATAATGAGGATCAATTAACTAATTTGGCCGAAAGTCCAGATTGGTTTGGTAAAGGAAGCAGAATAATTTTTACAACAAGAGATAAGCACTTGCTCACCTCATGTGGAGTAGATGAGCAAAGAATATATGAGATGAAAACCATGAAGAAAGATGAATCTCTTCAACTCTTTTCAAACAAAGCATTCAACAAAGATCATCCTCCTGATGAGGATTATTTGAAGTTGTCTGAGTCCGTAGTTGAATATACAGGAGGTCTTCCTTTGGCACTTGAAGTTTTGGGCTCTTTTCTTTGTGGGAGGAGTAAAGCTGAGTGCATGGATGCTTTAGATAGGTTGAAGCAAATTCCTGATAATGATATCCTTCAAGTACTTAAAATAAGTTACGATGGATTAAGGAATGAGGAAGAAAAGACAATATTTTTAGATATTGCTTGTTTCTTTAAGGGCTGGCAGAAAGAATATGTGACTCAAATTTTGGAAAGATGTGGTCTTCATGCAACAATAGGAATAAATGTCTTGATCCAGAAAACT 1380 0.3855 MAHGARGESSSSSDPCNSTHNWKYDVFLSFRGKDIRLKFLDHLDKALERSGIKTFKDDKDLERGGVIKQDLFQAIEDSLCAVVVVSENYAKSTWCLEELQKILEASKILDRRVFPIFYDVDPADVRHQRKRFREAMDEHEDRFREDNVKVQTWRSALCEIANLSGWDTRGRPEADLIEKIVTDVRAYIIPKLPSHVDNLVGIESRARDIMSLLEIGLDDRRFVGIWGMGGVGKTTLARATSSLCKKASFSSPNKRQDDDEYEGMKMIRKLLCSKKVLLVIDDVDNEDQLTNLAESPDWFGKGSRIIFTTRDKHLLTSCGVDEQRIYEMKTMKKDESLQLFSNKAFNKDHPPDEDYLKLSESVVEYTGGLPLALEVLGSFLCGRSKAECMDALDRLKQIPDNDILQVLKISYDGLRNEEEKTIFLDIACFFKGWQKEYVTQILERCGLHATIGINVLIQKT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5598g00004 460 Pfam TIR domain 23 184 IPR000157 GO:0007165
Pral5598g00004 460 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 166 IPR035897 -
Pral5598g00004 460 Gene3D - 16 185 IPR035897 -
Pral5598g00004 460 Pfam NB-ARC domain 256 388 IPR002182 GO:0043531
Pral5598g00004 460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 426 IPR027417 -
Pral5598g00004 460 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 189 - -
Pral5598g00004 460 PRINTS Disease resistance protein signature 222 237 - -
Pral5598g00004 460 PRINTS Disease resistance protein signature 366 380 - -
Pral5598g00004 460 Gene3D - 330 415 IPR042197 -
Pral5598g00004 460 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Pral5598g00004 460 FunFam Disease resistance protein (TIR-NBS-LRR class) 332 415 - -
Pral5598g00004 460 SMART till_3 23 163 IPR000157 GO:0007165
Pral5598g00004 460 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 459 IPR044974 GO:0006952
Pral5598g00004 460 Gene3D - 186 243 IPR027417 -
Pral5598g00004 460 Gene3D - 244 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5598g00004 Pral-Chr5598 96142 124313 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5598g00004 200 460 WRKY Transcription Factor Family AT5G45050 35.315 1.49e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5598g00004 - - pcin:129300043 564.303