Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5597g00002 ATGGAATTCATCTTCCCAAGTGAATGGAAGTTTTTGGCTGGTGTATTAAAAGTTGTTGTATGGCAATCATATCCTTTGGAAGCTCTTCGACTTGAAACTCAACTGAACGGACTTGTTCAAATGGATGCGCCACATAGCGAAATAAAACAACTTTGGAACAACAAACAGCCTATGACAAAGTTGGAATCTGTCGTATTCGAAGGGTCTCACAATTTGACCGAAACTCCAGACTTCTCACGTTCTCCAAATTTAAAACATTTACATATTGGTGGATGCAAATCTCTTGTCAAGGTTCATGCCTCCCTTGGACAGTTGAGAAAGCTTGTTGAGGTGGACTTAAATAATTGTGCAAGCCTTGAAATCCTACCCAAAAAATGGGAAACCAATTGTTTGGAGAAGTTAAGCCTTAGCGGGTGTAAAAAAGTTGCAAAGCTCCCAGAGTTTGGGAAAGGTATGGAAAAACTATCATATCTTGATGTGTGTGCTACTTCTATAACTAGACTTCCTGAATCAGTTGGATCCTTGACGGGTCTTGAATATCTAAATTTGAGTGGCTGTAAAATTAAAAATCTTGACAAGTCGTTGAAGACTCACGTAAGTCACCAAATTTCCGGCTTGAATGTAATGTCATTAACGGAGTTATACTTAAGCGGGTGTGGCTTAGATGATGGATCGATTCCTGATTTTGACAGTTTATCATCGCTCATTGTATTGGATCTAAGCAGTAATGATTTTGAGAATCTACCCATTGGTTGCTTCTCTGGTCTTTCTCGACTTGTCTTCCTTTCATTGAATTGCTGCGAAAGGCTCAAGTCATTGCCAAGGCTCCCATCACGATTAATTCGATTACATGCCTCCGGTTGTGATTCAATGGAACCATTATCATCAGATGGACAGTTATGGAATTTGGTTGCTTCACTTGACCACGAGTGTCGTTGGCGAACTGAATGTGAAGTCGATGATGATTGGGATGAAGATGGGCTGCAAGAAGTTCCTTCTGGAGCTGAACGGCTTCTCCTGCTAAGAGATTTCTGTGCAAGTCTTCCAGGATGCGAAATACCATCATGGTTTCCACATATAGAAGATTGCCATTTGGATGAGTGGGGTAGCAAACATGAGATTAAAGTGGACATGCCTCCATATTTTCGTGACAGTGAATGGTGCGGAATTGTTGTGTGCTTCCGTATGTCAGGTTACAGTGGTGGTTGGAGTGGTAAAGCTGCAGAACGTGATGATGAAGAGTGGGAGTGTGATATTCGTTTCCTCATTTCTGAAAAGCAGTGCATAATAATGGTGTTGGAATTAAATGAGGAAACATGTTGGCGGCACCTAAGAGCTCATCATAGCAATTCCCTTCGCATTCTATTTTCTGCTGACCATTCGGGTCACGATTGGGAAGTAAAGGAATGTGGGTGGAGAGTGATATGTAAAGAAGAGATACAAGATTGGCGCAATCTCAATGGTTTCTTCAACCAAGCCACCCAACCCCAGCTTGCTTCTTCTGATGAGGTCAAGCTTCCGCTGAGAGCACTTGTGGAATTCTTTTTAGGGGAGCGGTGTTTGACTCGCTGA 1572 0.4211 MEFIFPSEWKFLAGVLKVVVWQSYPLEALRLETQLNGLVQMDAPHSEIKQLWNNKQPMTKLESVVFEGSHNLTETPDFSRSPNLKHLHIGGCKSLVKVHASLGQLRKLVEVDLNNCASLEILPKKWETNCLEKLSLSGCKKVAKLPEFGKGMEKLSYLDVCATSITRLPESVGSLTGLEYLNLSGCKIKNLDKSLKTHVSHQISGLNVMSLTELYLSGCGLDDGSIPDFDSLSSLIVLDLSSNDFENLPIGCFSGLSRLVFLSLNCCERLKSLPRLPSRLIRLHASGCDSMEPLSSDGQLWNLVASLDHECRWRTECEVDDDWDEDGLQEVPSGAERLLLLRDFCASLPGCEIPSWFPHIEDCHLDEWGSKHEIKVDMPPYFRDSEWCGIVVCFRMSGYSGGWSGKAAERDDEEWECDIRFLISEKQCIIMVLELNEETCWRHLRAHHSNSLRILFSADHSGHDWEVKECGWRVICKEEIQDWRNLNGFFNQATQPQLASSDEVKLPLRALVEFFLGERCLTR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5597g00002 523 Gene3D Ribonuclease Inhibitor 16 152 IPR032675 -
Pral5597g00002 523 PANTHER LEUCINE-RICH REPEAT-CONTAINING 130 341 - -
Pral5597g00002 523 SUPERFAMILY L domain-like 15 317 - -
Pral5597g00002 523 Gene3D Ribonuclease Inhibitor 153 317 IPR032675 -
Pral5597g00002 523 SMART LRR_typ_2 175 198 IPR003591 -
Pral5597g00002 523 SMART LRR_typ_2 232 255 IPR003591 -
Pral5597g00002 523 Pfam Leucine rich repeat 210 265 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5597g00002 Pral-Chr5597 38036 39909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5597g00002 5 262 WRKY Transcription Factor Family AT4G12020 31.852 1.30e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5597g00002 - - pcin:129303275 443.736