Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5596g00003 ATGGAAGATGAATTGAAGCCAAAAATAGGAAAGGAATTTGGAAGCTGGGAAGAAGCATGGACTTTTTGGCAAGATTATGGTAAAAGAATTGGTTTTGGGCCTAGAAAATATAATGGTACAAAAAGTAGAAAAGATGGTTCACTTATTACATATAGATATGTGTGTAGTAAAGAGGGTGTTCGAAAAGAAGGTAAACAAGAGACATATTCTTCCAAGTTTCGAGCTGAAACAAGGACTAAATGTAAGGCAAAAATGATAGTATCCATTGTTGATGGAAAGTACAAGGTTACTAAATTTAATGAAGAGCATAATCATCCTCTTCACACACCTGAAACAATACATTTGCTAGCATCTCAAAGAAATTTAGCAGAAGTTGATGCTTATGGAATTGACCTTGCGAGAAAGTCTGGACTTCAACAGAAGGCTACTTTTGATTTAATGAGTACATATGCTGGGGGTAAAGCAAATCTTGGATATACACGAGTGGATTTGCAAAACTATTTGCAGTCTAAAAAGCAAAGAAGTATGAAGTATGGAGAGGTAAGGTGTCTATTTGAATATTTTCAAAAGCAACTTGCGGCGAATCCTGCATTCTACCACAAATATCAAGTGGACACAGAAGAAGAAATCACTAATGTGTTTTGGGCGGATGCTGGAATGCTTATAGACTATGCACTTTTTGGTGAAGTAGTATCTCTAGATACGACATATTGTACAAATCGTGATCATCGACCTCTTGCAATCTTTTCTGGCTTTAATCATTATAGAAGTACAGTCATTTTTGGAGCAGCATTATTGTATGATGAGACCACAGTGTCTTTCAAGTGGTTATTAGAAACTTTCTTAGAAGCCCACATGCAAAAGAAGCCTAAAACTGTATTTACAGATCAAGATCAAGCTATGACAAGGGCACTAAGTGAAGTTCTTCCTCATACAAAGCATTGTTTATGCACTTGGCATTTAAAGCAAAATGGCATTAAACATCTTGGAAATTTAATGAAAGATGGGTCACATTTTTTGTCCGACTTTTGTAAATGCATGAGTAAAATTTCAGAGGAAGAAAAGTTTGAAGAAGCATGGAGCCAATTAATCTCTTCTTATGATGTCAAAAACAATCCATGGCTTATATCCATGTATAATATTAAGGAGAAATGGGCTTGGTGCTATGTTAAGAATGCTTGTACACTAGGCATGAGAAGCACACAGCTTAGTGAAAGTGTGAATGCTGATGTGAAAAAATGCACAACACCAAGTTTATCCATCAATGATTTCTTTACTACTTTTGACAAAGTTGTTTCAGAGAAGCGAGACAAGGAATTGAAACTTGAGTTTGATTCTCGGCAACAAATTCCTAGGATGGTCAATCAAAGTGCACCTATATTGCGCCAACTTGTGCTGACTTATACCCCCAGTGCCTTTCGTATGTTCCAAGTACAATGGGATCTCCAATTCTCTGTGATGTTAACTCATCGCGATGAAAAGGAACCATTATATATATACATTGCCCACATGATTAATGAAGAAGGGGAATGGAGAGTTAAGTTTAAACCTGACACACATGACATTTTTTGCACCTGCGGAATGTTTGAGACTACTGGAATATTATGTTGTCATATATTGAAAGTTTATGAGTCAAAGGATGTGAGGATTATGCCTGAGAAATACATTATGAAGCGATGGACAAGGAAAGCAAGGAGTGATGTTGTATATGATTTGAGAGGAAGTGAGATACAGGTAGATCCTAGACTTGAAATTACACGAAGATATAGACAATTAATGCATAAAATGGCAAGATTGGCAACAAAGGCAGCTTACACTCCTGAAAGTTTTGAATGTGTTCATAAATGCATCATTGAGCTAGATAACAAAATTCCAAACAACAATGAAAATATTGTTCCTGAATCAAGTAAGGCCCCAGTGACAGAGTCTCAAAATATTCCTAAGGGATTCAAAAAGAGAGAAGGGACAAAAAGAAAGCGACGTTGGAAACCTTGGGAGGAAAAAAATTTAATGATAAGAAGGCGACTTATAAGAGAACAAAAGGTATGA 2049 0.3621 MEDELKPKIGKEFGSWEEAWTFWQDYGKRIGFGPRKYNGTKSRKDGSLITYRYVCSKEGVRKEGKQETYSSKFRAETRTKCKAKMIVSIVDGKYKVTKFNEEHNHPLHTPETIHLLASQRNLAEVDAYGIDLARKSGLQQKATFDLMSTYAGGKANLGYTRVDLQNYLQSKKQRSMKYGEVRCLFEYFQKQLAANPAFYHKYQVDTEEEITNVFWADAGMLIDYALFGEVVSLDTTYCTNRDHRPLAIFSGFNHYRSTVIFGAALLYDETTVSFKWLLETFLEAHMQKKPKTVFTDQDQAMTRALSEVLPHTKHCLCTWHLKQNGIKHLGNLMKDGSHFLSDFCKCMSKISEEEKFEEAWSQLISSYDVKNNPWLISMYNIKEKWAWCYVKNACTLGMRSTQLSESVNADVKKCTTPSLSINDFFTTFDKVVSEKRDKELKLEFDSRQQIPRMVNQSAPILRQLVLTYTPSAFRMFQVQWDLQFSVMLTHRDEKEPLYIYIAHMINEEGEWRVKFKPDTHDIFCTCGMFETTGILCCHILKVYESKDVRIMPEKYIMKRWTRKARSDVVYDLRGSEIQVDPRLEITRRYRQLMHKMARLATKAAYTPESFECVHKCIIELDNKIPNNNENIVPESSKAPVTESQNIPKGFKKREGTKRKRRWKPWEEKNLMIRRRLIREQKV 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5596g00003 682 SMART 26again6 522 549 IPR006564 GO:0008270
Pral5596g00003 682 MobiDBLite consensus disorder prediction 630 662 - -
Pral5596g00003 682 Pfam MULE transposase domain 230 324 IPR018289 -
Pral5596g00003 682 Pfam SWIM zinc finger 521 546 IPR007527 GO:0008270
Pral5596g00003 682 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 622 IPR031052 GO:0006355
Pral5596g00003 682 ProSiteProfiles Zinc finger SWIM-type profile. 511 547 IPR007527 GO:0008270
Pral5596g00003 682 Pfam FAR1 DNA-binding domain 21 108 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5596g00003 Pral-Chr5596 18980 21028 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral5596g00003 MULE 1.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5596g00003 - - pcin:129293091 984.556