Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5595g00041 ATGACAATTAAGGGAGGCTCAAACAAGGCCTGCGCTGCGTGCAAGTTTCAGAGAAGAAGATGCTCAAAAGAGTGCCCTCTGGCTCCTTATTTCCCTTCAGATCAACCTAAAAAATTCAGCAATGCTCACCGTTTGTTTGGAGTCGCCAACATCAAGAAAATCCTGGAACTGGTAGAGCCAAGACAGAGGGACGAAGCCATGAAATCTATTATCTTTGAATCTGATATGCGAGAACAGTTTCCGGTTCTGGGCTGTTTAGGAGTCATATGGAGCTATAATGATCAGATACTCGCCGCCATGGAGGAACTACGTTATTTGAAAACGAGACTTGCCGTTTACAAAGAACAATTTCATTATCAAATTTCTCCTTCTACGCCATTGGAATGTATGCCTGCTGGTACAGATACGTTGTCAGTGTCGAACCACTTGCAATATAACAACAATAACAATCAAATTGTTATGTTTGATGACGGTGGCGGTGGAAATGAAGTCTTTGGTCTTCAACAATCCTTCAGTTCCATGGCCGCGCAGTCCTCAAATTTTATAGTTAATCAATCAGAAATGGACACAGTTGAATATGGTGATCTTAATCCTTATAATGTAATGGCTGATGACAAACAACTGTTTATCGAATACAGGGAAGAAGATCTATGTGAGTCAAGTAAGGAGCCATCATTGAGAGAAGGGAAGTGTCATATTGAGCGTGGTTCGAGGAATGAACTCAAAAGTGCAGCAGCATACTTGGGTTTGACGAGTGTAAAAGGATGA 768 0.4167 MTIKGGSNKACAACKFQRRRCSKECPLAPYFPSDQPKKFSNAHRLFGVANIKKILELVEPRQRDEAMKSIIFESDMREQFPVLGCLGVIWSYNDQILAAMEELRYLKTRLAVYKEQFHYQISPSTPLECMPAGTDTLSVSNHLQYNNNNNQIVMFDDGGGGNEVFGLQQSFSSMAAQSSNFIVNQSEMDTVEYGDLNPYNVMADDKQLFIEYREEDLCESSKEPSLREGKCHIERGSRNELKSAAAYLGLTSVKG 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5595g00041 255 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Pral5595g00041 255 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Pral5595g00041 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5595g00041 Pral-Chr5595 222575 223439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5595g00041 1 114 AS2 family AT3G47870 57.018 1.44e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5595g00041 LOB 2.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5595g00041 - - pcin:129305015 379.022