Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5595g00030 ATGGCAAGATATTCGCTGGATCCTCGGAATTGTTTGCTGTTCCTGCTCTGTAGTTTGGCGTTTCTGTGGCGTTTTGCCGCCTCGCAGGCTGAAGATGACGTGCAATGCCTTAAAGGCATCAAAAGCTCTTTCAGTGATCCTCTGGGAAAGCTTGCTTCTTGGCGTTTTGATAACAACACCAGCGGTTTCATATGCACGTTCGTCGGCGTTACGTGCTGGAATCCCCAGGAGAATCGGGTCCTCAATCTGGAGCTCCGGGATATGAAACTCTCGGGCCAGGTGCCGGAGTCGCTGAAGTATTGCGGTTGGAGCCTGCAGAAACTGGATCTTGGGTCCAACGACGTTTCCGGTACGATCCCTTCTCAGATATGCGATTGGTTGCCATTTTTAGTAACACTGGACTTGTCCGATAATCATCTCTCTGGGCAAATACCTCCTACTCTCGTGAATTGCACTTACTTGAATACCCTGGTTCTTTCTAATAATCAACTTTCGGGTACCGTGCCTTTCGAATTTGGGAGTTTAGCTAGGCTTAGGACATTTTCTGTTGCTAATAATCATCTTACTGGTACGATTCCTTCGTATTTAAATGGTTATGACAAGGAAGATTTTGCTGGGAATAGTGGACTTTGTGGGGGTCCCCTTGGATCCAAGTGTGGTGGTTTGAGTAAGAAGAATCTTGCTATTATCATCGCTGCTGGGGTCTTTGGTGCTGCTGCTTCTTTATTATTGGCTTTTGGATTGTGGTGGTGGTATCATTTGCGGTTGGTTAGGAAGAAGAGAGGATTCGGGGTTGGAACCAGTGATGATTGGGCTGCGAGGTTGAGGGGCCACAGACTTGTTCAAGTTACATTGTTTCAGAAACCCCTTGTGAAGGTTAAACTAGGAGATTTGATGGCGGCTACGAATAATTTCAATTCTAAAAATATCATCATGTCTTCAAGAACAGGGACTACCTATAAAGCAGACCTTCCTGATGGTTCAACCCTTGCAGTCAAGCGGCTCAACACCTGTAAGATTGGAGAGAAGCAGTTTCGCATGGAGATGAGTAGGCTAGGACAAGTCAGGCATCCGAACTTGGCACCCCTTTTAGGCTTCTGTGTGGTTGAAGAGGAAAAACTTCTGGTTTATAAGCACATGTCAAATGGAACTCTGTCTTCGCTGTTGCATAAAGATGGCACTGGGTCAGAATTGGATTGGCCAATGAGATTCAGGATAGGCTTTGGCGCGGCTAGGGGTCTTGCTTATCTGCATCATGGGTGTCATCCTCCAATAAGACACCAAAATATTTGTTCCAATGTGATAGTTGTTGATGAAGATTTTGATGCTCGACTAATGGATTTTGGACTTGCTAGGCTTAGGACATCTGATTCCAATGATAGTAGCTTTGTCAGTGGGGACTTGGGGGAACTTGGCTATGTAGCTCCAGAATATCCTAGCACTCTTGTTGCTTCTGTAAAAGGGGATGTGTATGGATTTGGGGTTGTGCTTTTGGAGCTGGCTACTGGTCGCAAACCTCTTGAAGTGAGCAATGCAGAGGAAGATTTTAAGGGTAACTTAGTTGATTGGGTGCATATGTTGTCTAGTTCTGGTCGAATTAAGGATTGCATTGATAGGGCCATATGTGGAAGAGGGCATGACGAGGAGATTTTGCAGCTTCTGAAAATCGCATGTAATTGTGTGGTTTCTGGCCCCAAGGACAGGTGGTCCATGTCCCAGGTTTATCATTCCTTGAAGAGTTTGTCCAAAGACTACAATTTCTCTGAACATGATGATGAATTTCCATTGATTTTTAATAAGCCAGAGTCAGCATAA 1815 0.4523 MARYSLDPRNCLLFLLCSLAFLWRFAASQAEDDVQCLKGIKSSFSDPLGKLASWRFDNNTSGFICTFVGVTCWNPQENRVLNLELRDMKLSGQVPESLKYCGWSLQKLDLGSNDVSGTIPSQICDWLPFLVTLDLSDNHLSGQIPPTLVNCTYLNTLVLSNNQLSGTVPFEFGSLARLRTFSVANNHLTGTIPSYLNGYDKEDFAGNSGLCGGPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLVRKKRGFGVGTSDDWAARLRGHRLVQVTLFQKPLVKVKLGDLMAATNNFNSKNIIMSSRTGTTYKADLPDGSTLAVKRLNTCKIGEKQFRMEMSRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLSSLLHKDGTGSELDWPMRFRIGFGAARGLAYLHHGCHPPIRHQNICSNVIVVDEDFDARLMDFGLARLRTSDSNDSSFVSGDLGELGYVAPEYPSTLVASVKGDVYGFGVVLLELATGRKPLEVSNAEEDFKGNLVDWVHMLSSSGRIKDCIDRAICGRGHDEEILQLLKIACNCVVSGPKDRWSMSQVYHSLKSLSKDYNFSEHDDEFPLIFNKPESA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5595g00030 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 266 379 - -
Pral5595g00030 604 Pfam Protein tyrosine and serine/threonine kinase 326 514 IPR001245 GO:0004672|GO:0006468
Pral5595g00030 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 380 600 - -
Pral5595g00030 604 SUPERFAMILY Protein kinase-like (PK-like) 283 578 IPR011009 -
Pral5595g00030 604 Gene3D Phosphorylase Kinase; domain 1 265 379 - -
Pral5595g00030 604 ProSiteProfiles Protein kinase domain profile. 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5595g00030 604 SUPERFAMILY L domain-like 30 199 - -
Pral5595g00030 604 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Pral5595g00030 604 Pfam Leucine Rich Repeat 130 151 IPR001611 GO:0005515
Pral5595g00030 604 Gene3D Transferase(Phosphotransferase) domain 1 380 600 - -
Pral5595g00030 604 CDD STKc_IRAK 311 581 - -
Pral5595g00030 604 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Pral5595g00030 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 220 - -
Pral5595g00030 604 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 84 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5595g00030 Pral-Chr5595 169904 172099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5595g00030 1 603 Receptor kinase-like Gene Family AT3G28450 63.889 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pral5595g00030 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5595g00030 - - qsa:O6P43_004545 915.99