Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5595g00024 ATGAGTTGGGGTTCAGATAGTAAGACGGAGGTCATGAAGAAGAAGAGAAGTAGTGGGTCTGTTCGATCCATTTTCATGCACGCCGATTCCCAAGACTGGTTTTTGATGGCGCTTGGTGTGTTGGGGTCTTTCGGTGACGGCTTCACCGGTCCTATTGTGTTGTTTATCAGTAGCCGCTTGATCAACAATATTGGAGGGGCCTCGTCTCGGATGGATGTAACTGCCTTTGTTCATAACTCTAATGAGAATGCGGTGGCTTTATTATATTTGGCTTGTGGGTCATTCTTAGCGTGCTTCCTCGAGGGATATTGTTGGACGAGGACAGGAGAGAGACAAGCAGCGAGAATGAGATCCAGGTACTTGAAAGCAATGCTGAGACAAGAAGTTGCATACTTTGATTTACGAGTCACAACCACGTCCGAGGTTACCACCAGCGTCTCTAACGATAGCATCGTAATTCAAGATTTTCTTAGCGAAAAGGTTCCAAATTTGCTGACAAATCTCTCTATGTTCGTTGCGAGCTACGTTGTGGCCTTTTCAATGTTCTGGAGATTGGCTATCGTAGCCTTACCTTTCGTAGTTCTTCTAGTAATCCCTGGTTTAATTTACGGAAGGACTTTAACGGGGCTGGCTAGCAAGATTAGGGACGAGTACAACCAGGCCGGTGCAATAGCAGAGCAAGCAATATGTTCCATCAGAACCGTCTATTCCTTTGTTGGGGAAACCAAAACCACAGCTGCTTTCTCCTCTGCATTACAGGGTTCAGTCAAGCTAGGTCTAAAACAAGGCTTGGCTAAAGGCTTAGCCATAGGAAGCAACAGTATTGTGTTCGTCATATGGTCCTTCATTTGCTATTATGGTAGCAGACTCGTCATGTACCATGGCGCTCAAGGTGGCACCGTTTTCACCGTTGGAGCAGCCATGGCTCTCGGAGGATTATCGCTGGGAGCTGGTTTATCCAACGTGAAGTACCTCTCGGAAGCAAGTTCGGCAGGGGAACGAATAATGGAGGTGATAAAGAGAATCCCCAAGATTGATTCAGAGAACACGGGAGGTGAGATTCTGGACAGAATTCACGGGGAAGTGGAGTTCGATCGCGTAGAGTTTGCATACCCGTCGAGGCCGGACAGCATTATCCTGAAGGATTTCAGTGTGAAGATTCCGGCGGGGAAGACGGCAGCACTGGTGGGCGGGAGTGGGTCAGGGAAGTCGACGGTGATATCACTTTTGCAGAGATTTTACGACCCAATGGGAGGAGAAATACGGGTGGACGGGGTGGGAATTAAGAGGTTGAACCTAAAGTGGATGAGATCGCAGATGGGACTGGTGAGCCAAGAGCCGACACTGTTCGCGACAAGCATTAAAGAGAACATACTATTTGGGAAAGAGGACGCTACTGAAAATGACATTGTGGAGGCTGCCAAAGCTTCCAATGCTCATGATTTCATTTCTCAGTTGCCTCTGGGATACGATACCCAGGTGGGGGAACAAGGGATTCAAATGTCAGGAGGACAAAAACAGAGGATTGCTATTGCGCGAGCAATTATCAGAAAACCACAAATCCTCCTCCTCGATGAAGCAACAAGTGCTCTAGACACTGAGTCTGAACGAGTTGTCCAAGAAGCTCTAGGCAATGTAATTGGACGCACTACCATCATCATTGCTCATCGCCTGTCCGCCATTCGGAATGCTGACGTGATTGTCGTTCTCCAAAATGGGAGCCTTATGGAAATGGGATCACATGATGAGCTCATGAAAAATGAAAATGGGCTTTACACCTCTCTAGTTCGCCTCCACCAAACAGAGAAGTCTAGAATGACTCAAGAAGATGCTGCCACCTCTACCTCTTCTGCTGTATCAGATAGGGACATAAACAATACTAGCAGTCGAAGACTATCTCTTATGACTCAATCTAACTCTACGAATTCATTAGTACAAGGTCGAGTTTCCAATGCCGATGAAGAAACCGATGCTGCTGCAGAAGAGAAGAGACCCCCTATTCCCTCTTTTCGAAGGTTGCTTGCCCTAAATCTCCCAGAATGGAAGCAAGCTACTTTAGGGTGTTTTAGTGCGTTTCTGTTTGGTGCAATTTACCCATTATTCTCATTCTCAATGGGGTCCATGGTTTCTACATTTTTTTTGACAGACCATGACGAGATCAAAAAGAAGATGAAGGTTTATGCGTTTTGTTATCTGGGTTTATTAGCGTTCTCAATGATTACCAGCATAATCCAGCATTATAATTTTGCTTACATGGGAGAATACTTAACCAAAAGGATAAGAGAGATAACATTTTCAAAGATACTCACATTTGAAGTTGGTTGGTTCGATCAACCTGAAAATACAAGTGGTGCGGTTTGGTCTAGACTGGCAAAAGATGCTAGTGCGGTGAGGTCTCTAATAGGAGACAGAATATCCCTGCTGATACAGACTTTCTCCACGGTTATAATTGCTTGCACAATGAGCCTGGTGATTTCATGGAGGTTTGCCATTGTTATCATAGCCGTTCAACCCCTTATTGTGGTCAGCTACTACACTAGGAAGGTCTTACTCAAGAGCATGACCAAGAAGGCCACTAAGGCGCAGGATGAATGTAGCAAGCTAGCTGCAGAAGCTGTTTCGAACCTTCGTATTGTTGCAGCCTTCTCTTCCCATGACCGGATCCTCAAAATGCTTGAAAAATCCCAAGAAGGCCCAAGGCAGGAGAATCTTAGACAATCTTGGTTTGCTGGTATTGGCCTTGCTTTCTCTCAAAGCGTCACAGCTTGTACTTGGGCCTTAGACTTTTGGTATGGGGGAAAGCTGATGTCCATTGGTCTTATCAAAGCTGAAGCACTATTTCAAACGTTCATGGTACTAATGGGCACAAGCCGTGTCATTGCAGATGCAGGAAGCATGACATCTGACCTTGCCAGAGGTGCAGATTCTTTGGGCTCCCTTTTTGCAATTCTCGATCGCTCCACAAAAATTGATCCGGATTATCAAAACGGGTATAAGCCCGATAAACTCACTGGCCTCATAGAACTTCGCGATATTCATTTTGCATACCCAGCTAGGCCGAACGACATGATCTTTCAAGGGTTTTCAATGAGAATGGAAGCAGGGAAATCAACGGCATTAGTGGGCCAGAGTGGGTCTGGAAAGTCAACCATCATAGGATTAATTGAGAGATTCTACGATCCATCAAAGGGGGTAGTGAGCATAGATGGGAGAAACATAAAGTCATACCACCTGAGGAGCCTTAGAGAACAAATAGCATTGGTGAGCCAAGAGCCGACATTATTTGCAGGCAGCATGAAAGAGAACATCGCATATGGAGCTAAGGATAAGGTTGACGAAGCAGAGATCATAGAGGCAGCTAAGGTAGCAAATGCACATGATTTCATATCAAGCTTGAGAGATGGATATGAGACATGGTGTGGGGAGAGAGGAGTACAATTATCAGGGGGCCAAAAGCAAAGAATAGCAATAGCAAGAGCAATAATGAAGAACCCTGGGGTGTTGCTACTAGACGAGGCAACAAGTGCACTGGATAACCAATCGGAGAGGGCAGTGCAAGAAGCACTAGAGCGTGTTATGGTTGGGAGAACCAGTGTGGTGGTGGCACATAGATTGAGCACCGTTCAGAAGTGTGATGTGATAGCTGTCTTGGAAAAGGGAAAGGTGGTGGAGAAAGGCACACACTCGTCTTTGCTTGCCAAGGGACCAGGTGGGGCTTATTATGCTCTGCTTACTCTTCAAAGGAGGCACTCCAATTCCATTAACCAACCCAGTTGA 3777 0.4596 MSWGSDSKTEVMKKKRSSGSVRSIFMHADSQDWFLMALGVLGSFGDGFTGPIVLFISSRLINNIGGASSRMDVTAFVHNSNENAVALLYLACGSFLACFLEGYCWTRTGERQAARMRSRYLKAMLRQEVAYFDLRVTTTSEVTTSVSNDSIVIQDFLSEKVPNLLTNLSMFVASYVVAFSMFWRLAIVALPFVVLLVIPGLIYGRTLTGLASKIRDEYNQAGAIAEQAICSIRTVYSFVGETKTTAAFSSALQGSVKLGLKQGLAKGLAIGSNSIVFVIWSFICYYGSRLVMYHGAQGGTVFTVGAAMALGGLSLGAGLSNVKYLSEASSAGERIMEVIKRIPKIDSENTGGEILDRIHGEVEFDRVEFAYPSRPDSIILKDFSVKIPAGKTAALVGGSGSGKSTVISLLQRFYDPMGGEIRVDGVGIKRLNLKWMRSQMGLVSQEPTLFATSIKENILFGKEDATENDIVEAAKASNAHDFISQLPLGYDTQVGEQGIQMSGGQKQRIAIARAIIRKPQILLLDEATSALDTESERVVQEALGNVIGRTTIIIAHRLSAIRNADVIVVLQNGSLMEMGSHDELMKNENGLYTSLVRLHQTEKSRMTQEDAATSTSSAVSDRDINNTSSRRLSLMTQSNSTNSLVQGRVSNADEETDAAAEEKRPPIPSFRRLLALNLPEWKQATLGCFSAFLFGAIYPLFSFSMGSMVSTFFLTDHDEIKKKMKVYAFCYLGLLAFSMITSIIQHYNFAYMGEYLTKRIREITFSKILTFEVGWFDQPENTSGAVWSRLAKDASAVRSLIGDRISLLIQTFSTVIIACTMSLVISWRFAIVIIAVQPLIVVSYYTRKVLLKSMTKKATKAQDECSKLAAEAVSNLRIVAAFSSHDRILKMLEKSQEGPRQENLRQSWFAGIGLAFSQSVTACTWALDFWYGGKLMSIGLIKAEALFQTFMVLMGTSRVIADAGSMTSDLARGADSLGSLFAILDRSTKIDPDYQNGYKPDKLTGLIELRDIHFAYPARPNDMIFQGFSMRMEAGKSTALVGQSGSGKSTIIGLIERFYDPSKGVVSIDGRNIKSYHLRSLREQIALVSQEPTLFAGSMKENIAYGAKDKVDEAEIIEAAKVANAHDFISSLRDGYETWCGERGVQLSGGQKQRIAIARAIMKNPGVLLLDEATSALDNQSERAVQEALERVMVGRTSVVVAHRLSTVQKCDVIAVLEKGKVVEKGTHSSLLAKGPGGAYYALLTLQRRHSNSINQPS 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5595g00024 1258 FunFam ABC transporter B family member 4 352 607 - -
Pral5595g00024 1258 SUPERFAMILY ABC transporter transmembrane region 28 346 IPR036640 GO:0005524|GO:0016020
Pral5595g00024 1258 CDD ABC_MTABC3_MDL1_MDL2 362 598 - -
Pral5595g00024 1258 CDD ABC_MTABC3_MDL1_MDL2 1007 1247 - -
Pral5595g00024 1258 PANTHER ABC TRANSPORTER B FAMILY 6 697 IPR039421 -
Pral5595g00024 1258 Pfam ABC transporter 1026 1175 IPR003439 GO:0005524
Pral5595g00024 1258 Gene3D ABC transporter type 1, transmembrane domain 86 937 IPR036640 GO:0005524|GO:0016020
Pral5595g00024 1258 Pfam ABC transporter 380 529 IPR003439 GO:0005524
Pral5595g00024 1258 Coils Coil 851 871 - -
Pral5595g00024 1258 CDD ABC_6TM_Pgp_ABCB1_D2_like 674 990 - -
Pral5595g00024 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 598 IPR027417 -
Pral5595g00024 1258 SUPERFAMILY ABC transporter transmembrane region 665 986 IPR036640 GO:0005524|GO:0016020
Pral5595g00024 1258 MobiDBLite consensus disorder prediction 602 624 - -
Pral5595g00024 1258 Gene3D - 360 623 IPR027417 -
Pral5595g00024 1258 FunFam ABC transporter B family member 4 997 1253 - -
Pral5595g00024 1258 Gene3D - 997 1256 IPR027417 -
Pral5595g00024 1258 Pfam ABC transporter transmembrane region 686 954 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5595g00024 1258 Pfam ABC transporter transmembrane region 37 304 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5595g00024 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1247 IPR027417 -
Pral5595g00024 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 362 597 IPR003439 GO:0005524
Pral5595g00024 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 972 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5595g00024 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1007 1244 IPR003439 GO:0005524
Pral5595g00024 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5595g00024 1258 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524|GO:0016887
Pral5595g00024 1258 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 335 - -
Pral5595g00024 1258 FunFam ABC transporter B family member 1 23 359 - -
Pral5595g00024 1258 FunFam Putative ABC transporter B family member 8 649 995 - -
Pral5595g00024 1258 ProSitePatterns ABC transporters family signature. 501 515 IPR017871 GO:0005524|GO:0016887
Pral5595g00024 1258 SMART AAA_5 1034 1220 IPR003593 GO:0016887
Pral5595g00024 1258 SMART AAA_5 389 574 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5595g00024 Pral-Chr5595 129466 135654 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5595g00024 22 1258 Calmodulin-binding Proteins AT2G36910 43.700 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5595g00024 K05658 - cave:132181353 1794.25