Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5595g00010 ATGGCAGGTGGAACCGAAGCCTTCCCGGATTTGGGATCACACTGCCATCACGTTGATTGCAATCAACTCGATTTTCTCCCTTTCACATGCGACGCTTGCTCTCAGGTTTTCTGTTTGGAACATAGATCTTACAAGTCCCACAATTGCCCTAAATCACACCATCGGAGCAGGAAGGTTGTGGTTTGTCCAACATGTTCCATGTCAATTGAGACCACTGGTTATAATGAAGACGACGAGAAGGCTATATTGCAGAAGCATGACAGATCTGGAATGTGTGACCCCAGCAAGAAGAAGAAGCCCACTTGTTCTGTAAGAAGATGCAAGGAGGTTTTGACGTTTTCTAATACCTGCACTTGTAAAAATTGCCACCTGAAGGTGTGCCTCAGGCATCGCTTTCCTGCGGACCACGCATGTAAAGGAGGAACCTCTTCTTCTTTGTCATCACCTGAAGCTCCTTCAAATGGGAGTTGGAAGGATCGATTCTTGGCTGCTCTGCCTTGGAGAACTAATGGACAGCAATGTTCCCAAGGCAGGGCACAAAGCACCTCATCTTCTAGTACTCCGTTTGTTAAAATCTTCTGA 582 0.4656 MAGGTEAFPDLGSHCHHVDCNQLDFLPFTCDACSQVFCLEHRSYKSHNCPKSHHRSRKVVVCPTCSMSIETTGYNEDDEKAILQKHDRSGMCDPSKKKKPTCSVRRCKEVLTFSNTCTCKNCHLKVCLRHRFPADHACKGGTSSSLSSPEAPSNGSWKDRFLAALPWRTNGQQCSQGRAQSTSSSSTPFVKIF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5595g00010 193 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Pral5595g00010 193 SUPERFAMILY AN1-like Zinc finger 87 140 IPR035896 -
Pral5595g00010 193 MobiDBLite consensus disorder prediction 171 193 - -
Pral5595g00010 193 SUPERFAMILY AN1-like Zinc finger 5 60 IPR035896 -
Pral5595g00010 193 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Pral5595g00010 193 Gene3D - 78 154 IPR035896 -
Pral5595g00010 193 Gene3D - 2 66 IPR035896 -
Pral5595g00010 193 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 184 - -
Pral5595g00010 193 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Pral5595g00010 193 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Pral5595g00010 193 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Pral5595g00010 193 Pfam AN1-like Zinc finger 15 53 IPR000058 GO:0008270
Pral5595g00010 193 FunFam AN1-type zinc finger protein 2B isoform X1 5 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5595g00010 Pral-Chr5595 47991 48811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5595g00010 2 168 C2H2 Transcription Factor Family AT3G28210 61.078 1.19e-72 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5595g00010 - - pcin:129305124 317.005