Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5594g00010 ATGTCGCAAGGCCATGCAATTGAGCTTTACTTCGACCCTGCGCTTGAAAACCAGGTCTTGAAGGCCTGGAATGTACTGGCTCGCCGACAAATCAGTACCCAACTCATAGAAATTGAATCGCGCCCCCACATCACTCTTTTCTCAAGCCAAATCATTGATCCTATAAAGGTTGAATCCATCGTTAAAAATTTCGCAGCCAAGCTTGAATCTCTGCCTCTATCGTTCTCTTCCATTGGGAGCCTGCCGAATGACATCAATGTCCTTTTTCTTGCTCCCACGCCCTCAATCTCGCTACTTCAGTTCCAGTCGCAGTTGTGTGATGCATTGAAGAAAGAAGGCGTCGAGATAAGCGAAGAATATCGCCAGGATTGTTGGATTCCTTATTGTTCGGTTGCGCAAGAAGTGCCAAAATCTAGGATGGCCGAGGCATTCTGTGTCTTGCGAGACTTAAAATTGCCAGTCACTGGTTATGCTACGGATATCGGACTGGTGGAGTTCTCGCCTGTTCGTGAGCTCTTCTCATATGTGCTGGGCAACACAGTAGACACTTAA 552 0.471 MSQGHAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSQIIDPIKVESIVKNFAAKLESLPLSFSSIGSLPNDINVLFLAPTPSISLLQFQSQLCDALKKEGVEISEEYRQDCWIPYCSVAQEVPKSRMAEAFCVLRDLKLPVTGYATDIGLVEFSPVRELFSYVLGNTVDT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5594g00010 183 Gene3D Cyclic phosphodiesterase 6 177 - -
Pral5594g00010 183 SUPERFAMILY LigT-like 5 166 IPR009097 -
Pral5594g00010 183 PANTHER - 1 181 - -
Pral5594g00010 183 Pfam 2'-5' RNA ligase superfamily 41 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5594g00010 Pral-Chr5594 53387 54933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5594g00010 1 183 Calmodulin-binding Proteins AT5G40190 70.492 9.66e-90 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5594g00010 - - cave:132181051 317.39