Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5594g00004 ATGGCGAGGATGCACTGGGACAAGGACCTTGTTCCACTATGTGCACTGATTGCTGCGGAGTGCATAAATGTTGGTGCTGCCATTCTGTTTAAAGCAGCCACTCTCAATGGCGTGAATTACTACGTCTACACCCTCTATGCTTCTGCAATTTCCGCTCTTGTTCTTCTTCTTCCTCTGCCCTTTGTTCTCCGTCGGTCAACTGGGCTTCCTTCATTCAAGTCGTCTCTGCTTTTCAGAATTTTCCTCCTGGGACTGATCAGCCTTGGAACTCGGCTTTGCGGAGCCAAAGCCATTGAATACAGTTCACCTACTCTGGCTGCCGCCATGAGCAACCTGGTTCCCGCTTTTACCTTCATACTTGCCGTCTTCTTCAGGATGGAAAAGGCAGAGTTAAGGAGTTCAAGCACTCGGGCGAAAATCATAGGTACAGTAGCATCAATTTCTGGTGCACTCGTAGTTGTTCTCTTCAGGGGTCCTGCACTCAAGTCAGCATCTCCTCCAACAAATTATCCACGGGATTCATCATCAACACAAACGAAATGGCTTCTCGGTGGCTTCCTCCTTCTTGTTCAGTGTCTTCTAGCTCCAATCTGGTACATTGTGCAGACCCAAGTTATAAAAGAATATCCAGCAAAGCTGGTAGTGGTGTTTTTATACACCCTGTGCGGGACTCTTGTAGCTGCACCAGTGTGTTTAGTAGCAGAACCAGACTTGAGTGCTTGGAAGATAAAGCCTGACATAACATTGCTCTCCATTATTTACTCGGGATTCTTATGTACATGTTTAATCTGTCTGATTGAAATATGGAGCCTCCATCTGAAAGGCCCTGTGTATGTGTCAATCTTCAAGCCTCTTTCCATCGCCATTGCTGCTGCTATGAGTGTCATTTTCCTGGGCGATGCTCTGCATCTGGGCAGCGTTATTGGAGCAGCTATACTGTCGGTTGGATTTTACGCTGTGATATGGGGGAAAGCGAGAGAGGAAGAAGAGTTGAAAGAGCAATGCGAATTGGGTAGCCCAGCAATCCAGCCGAATAACAGGACTCCTTTGTTGCAGAGCTACGTCAATGAGGAAGATAATAGTAAATAA 1089 0.4674 MARMHWDKDLVPLCALIAAECINVGAAILFKAATLNGVNYYVYTLYASAISALVLLLPLPFVLRRSTGLPSFKSSLLFRIFLLGLISLGTRLCGAKAIEYSSPTLAAAMSNLVPAFTFILAVFFRMEKAELRSSSTRAKIIGTVASISGALVVVLFRGPALKSASPPTNYPRDSSSTQTKWLLGGFLLLVQCLLAPIWYIVQTQVIKEYPAKLVVVFLYTLCGTLVAAPVCLVAEPDLSAWKIKPDITLLSIIYSGFLCTCLICLIEIWSLHLKGPVYVSIFKPLSIAIAAAMSVIFLGDALHLGSVIGAAILSVGFYAVIWGKAREEEELKEQCELGSPAIQPNNRTPLLQSYVNEEDNSK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5594g00004 362 PANTHER WAT1-RELATED PROTEIN 11 333 IPR030184 GO:0016020|GO:0022857
Pral5594g00004 362 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020
Pral5594g00004 362 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Pral5594g00004 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 326 - -
Pral5594g00004 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5594g00004 Pral-Chr5594 16904 18918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5594g00004 5 361 Nodulin-like Gene Family AT5G40230 51.791 9.01e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5594g00004 - - pcin:129305533 549.28