Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5594g00002 ATGTGGATAATCTTCGTGTCATTCCTTCTCTTCCTGAACTCTGGCAATTGTGTGGAGGACGAGGTCAGCAGCACACTGATAAACTTTCTTGCAAAACTCTCTAACAACAATGGACGCCAGAACTCTAATTTGGTCTGGAAGCCAGGCTCTGATCCCTGCTGGGACCTGTGGCAAGGCGTGGTATGTGATGATAAAAACGCCTCAGTACAGAAGCTACTTCTTAACAGGTCCAATTTAGCTGGAACTCTTGACGTTGCTATGCTTTGCAATTTGCGGCCCCTCGTCGCGTCTCTCACATCTCTTAACCTCGACGGCAACGACATAAGTGGAGGAATAGCAAATGAGGTTGGAAACTGCAAGCATCTCACTCACTTTAATCTAAGTGGTAACCAACTTTCTGGGGACCTTCCTAGCTCACTTGCCATGCTGAGTAATTTGAAAGAACTCGACATCTCCAGCAATAGGTTCTCCGGGAACTTGCCAAACATGTCCTTAATCTCTGGACTGAATTCCTTTTTGGCACAACATAATCAGTTCACGGGGGAGATACCCCCTTTAAACTTTTCCAAATTGGACTATTTCAATGTATCCTTCAACAATTTAAGTGGCCGTATTGCAGATTTGCAAAACCATTTCTCTGCGGATAGTTTCTTGGGAAATCCTGAGCTTTGTGGAAACCCTTTGCCAAAAAGCTGTTCATCTCTCCCTATATCCGATGCCAAACCATCTGATTCAGAAGAATCGAAGGGTCCTTCCAAAAGCCAGATTCTTATGTATTCAGGCTATGCTGTTCTGTGTTTGGTCTTCATCCTCTTTGTAGTTCTTGCGCTGTGTAAAAGAAACAAGACAGGAAATAAGGTTGAAGCAGAAAAGGAGGCAACTGATGACAGTACTACTGACAAGCCTAGCTATGTTTCAAATGGATACAAATTAAGCGTGAGCAGACCAGAGTTATCAGTCACTGCTGAGAGTGGGATGGTTTCACAATCACTTGTTGTTCTTTCAAGGCCAAATGTAAATGATATTACATTGGAGGAATTGATGATGTCCCCTGCGGAACTGATTGGCCGAGGAAAGTTTGGTAGTCTTTATAAAGTGATGCTGGACAATGGGATGATGGTCGTTGTTAAGAGGATTAATGACTTAACATCAAGCCGTGACTTCAAAGAAAGGATCCAAATGCTGAGCCAAGTGAAGCACCATTCTGTACTGTTACCTCTTGCTTTCTATTGTTGCAAACAAGAGAAACTTTTGGTTTATGAATATCAGGAGAATGGAAGTTTGTTCAAGCTTCTACATGGTTCCTCAAAAGACTTTGATTGGACCAGTAGACTTGGGATTGCAGCTACAGTTGCAGAGGCGTTAGCTTTCATGCATCAAGAGCTTGAAGAATGTGGGATCGCCCATGGAAACCTGAAATCGTCCAACATTTTGCTAAACAAGAACATGGAGCCCTGCATAAGCGAGTATGGCGTTATGGTTATGGATGATCAAGAACTTAAAATTCAGCAGAGTTCATCTTTTGCCGGTTCTTATGCTGCTGGTGCATCAGAAGCCTTCAAGGGAGATGTTTATGGCTTTGGAGTGATTCTTCTTGAACTACTTACTGGGAAGTTGGTGAAGAGCAATGGGATGGACCTGACCGAGTGGGTTGAGCGTGTTGTAAGGGAAGAATGGACGGGTGAAGTGTTTGACAGGTCCCTGATATCAGAGTATGCCAGTGAAGAAAGGATGGTGAGCTTGCTTCAAGTAGCTATAAAATGTATTAATCATTCTCCAGAGGCTAGGCCAAGTATGAGCCAAGTTGTTCTCATGATCAGCGTCATAAAAGAGGAAGAAGAGAAATCCTTGATTTATGAAGCACAGGACTAG 1872 0.4332 MWIIFVSFLLFLNSGNCVEDEVSSTLINFLAKLSNNNGRQNSNLVWKPGSDPCWDLWQGVVCDDKNASVQKLLLNRSNLAGTLDVAMLCNLRPLVASLTSLNLDGNDISGGIANEVGNCKHLTHFNLSGNQLSGDLPSSLAMLSNLKELDISSNRFSGNLPNMSLISGLNSFLAQHNQFTGEIPPLNFSKLDYFNVSFNNLSGRIADLQNHFSADSFLGNPELCGNPLPKSCSSLPISDAKPSDSEESKGPSKSQILMYSGYAVLCLVFILFVVLALCKRNKTGNKVEAEKEATDDSTTDKPSYVSNGYKLSVSRPELSVTAESGMVSQSLVVLSRPNVNDITLEELMMSPAELIGRGKFGSLYKVMLDNGMMVVVKRINDLTSSRDFKERIQMLSQVKHHSVLLPLAFYCCKQEKLLVYEYQENGSLFKLLHGSSKDFDWTSRLGIAATVAEALAFMHQELEECGIAHGNLKSSNILLNKNMEPCISEYGVMVMDDQELKIQQSSSFAGSYAAGASEAFKGDVYGFGVILLELLTGKLVKSNGMDLTEWVERVVREEWTGEVFDRSLISEYASEERMVSLLQVAIKCINHSPEARPSMSQVVLMISVIKEEEEKSLIYEAQD 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5594g00002 623 Gene3D Transferase(Phosphotransferase) domain 1 424 623 - -
Pral5594g00002 623 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Pral5594g00002 623 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Pral5594g00002 623 Gene3D Ribonuclease Inhibitor 16 232 IPR032675 -
Pral5594g00002 623 Pfam Protein tyrosine and serine/threonine kinase 353 603 IPR001245 GO:0004672|GO:0006468
Pral5594g00002 623 PANTHER OS05G0588300 PROTEIN 4 611 - -
Pral5594g00002 623 Gene3D Phosphorylase Kinase; domain 1 320 422 - -
Pral5594g00002 623 FunFam Leucine-rich repeat receptor protein kinase EMS1 92 186 - -
Pral5594g00002 623 SUPERFAMILY Protein kinase-like (PK-like) 351 606 IPR011009 -
Pral5594g00002 623 ProSiteProfiles Protein kinase domain profile. 349 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5594g00002 623 SUPERFAMILY L domain-like 42 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5594g00002 Pral-Chr5594 10360 12336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5594g00002 23 610 Receptor kinase-like Gene Family AT1G68400 34.548 7.35e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5594g00002 PK_Tyr_Ser-Thr 2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5594g00002 - - gmx:100813796 794.653