Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5593g00063 ATGGACGCCAGAACTCTAATTTGGTCTGGAAGCCAGGCTCTGATCCCTGCTGGGACCTGTGGCAAGGCGTATTTGCAAAACCATTTCTCTGCGGATAGTTTCTTGGGAAATCCTGAGCTTTGTGGAAACCCTTTGCCAAAAAGCTGTTCATCTCTCCCTATATCCGATGCCAAACCATCTGATTCAGAAGAATCGAAGGGTCCTTCCAAAAGCCAGATTCTTATGTATTCAGGCTATGCTGTTCTGTGTTTGGTCTTCATCCTCTTTGTAGTTCTTGCGCTGTGTAAAAGAAACAAGACAGGAAATAAGGTTGAAGCAGAAAAGGAGGCAACTGATGACAGTACTACTGACAAGCCTAGCTATGTTTCAAATGGATACAAATTAAGCGTGAGCAGACCAGAGTTATCAGTCACTGCTGAGAGTGGGATGGTTTCACAATACTTGTTGTTTCTTTCAAGGCCAAATGTAAATGATATTACATTGGAGGAATTGATGATGTCCCCTGCGGAACTGATTGGCCGAGGAAAGTTTGGTAGTCTTTATAAAGTGATGCTGGACAATGGGATGATGGTCGTTGTTAAGAGGATTAATGACTTAACATCAAGCCGTGACTTCAAAGAAAGGATCCAAATGCTGAGCCAAGTGAAGCACCATTCTGTACTGTGTTACCTCTTGCTTTCTATTGTTGCAAACAAGAGAAACTTTTGGTATGAATATCAGGAGAATGGAAGTTTGTTCAAGCTTCTACATGGTTCCTCAAAAGACTTTGATTGGACCAGTAGACTTGGGATTGCAGCTACAGTTGCAGAGGCGTTAGCTTTCATGCATCAAGAGCTTGAAGAATGTGGGATCGCCCATGGAAACCTGAAATCGTCCAACATTTTGCTAAACAAGAACATGGAGCCCTGCATAAGCGAGTATGGCGTTATGGTTATGGATGATCAAGAACTTAAAATTCAGCAGAGTTCATCTTTTGCCGGTTCTTATGCTGCTGGTGCATCAGAAGCCTTCAAGGGAGATGTTTATGGCTTTGGAGTGATTCTTCTTGAACTACTTACTGGGAAGTTGGTGAAGAGCAATGGGATGGACCTGACCGAGTGGGTTGAGCGTGTTGTAAGGGAAGAATGGACGGGTGAAGTGTTTGACAGGTCCCTGATATCAGAGTATGCCAGTGAAGAAAGGATGGTGAGCTTGCTTCAAGTAGCTATAAAATGTATTAATCATTCTCCAGAGGCTAGGCCAAGTATGAGCCAAGTTGTTCTCATGATCAGCGTCATAAAAGAGGAAGAAGAGAAATCCTTGATTTATGAAGCACAGGACTAG 1323 0.4316 MDARTLIWSGSQALIPAGTCGKAYLQNHFSADSFLGNPELCGNPLPKSCSSLPISDAKPSDSEESKGPSKSQILMYSGYAVLCLVFILFVVLALCKRNKTGNKVEAEKEATDDSTTDKPSYVSNGYKLSVSRPELSVTAESGMVSQYLLFLSRPNVNDITLEELMMSPAELIGRGKFGSLYKVMLDNGMMVVVKRINDLTSSRDFKERIQMLSQVKHHSVLCYLLLSIVANKRNFWYEYQENGSLFKLLHGSSKDFDWTSRLGIAATVAEALAFMHQELEECGIAHGNLKSSNILLNKNMEPCISEYGVMVMDDQELKIQQSSSFAGSYAAGASEAFKGDVYGFGVILLELLTGKLVKSNGMDLTEWVERVVREEWTGEVFDRSLISEYASEERMVSLLQVAIKCINHSPEARPSMSQVVLMISVIKEEEEKSLIYEAQD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5593g00063 440 SUPERFAMILY Protein kinase-like (PK-like) 168 423 IPR011009 -
Pral5593g00063 440 Coils Coil 438 440 - -
Pral5593g00063 440 ProSiteProfiles Protein kinase domain profile. 166 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5593g00063 440 Gene3D Phosphorylase Kinase; domain 1 155 239 - -
Pral5593g00063 440 Gene3D Transferase(Phosphotransferase) domain 1 241 440 - -
Pral5593g00063 440 Pfam Protein kinase domain 170 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5593g00063 440 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 430 IPR046959 -
Pral5593g00063 440 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5593g00063 Pral-Chr5593 334241 336116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5593g00063 33 431 Receptor kinase-like Gene Family AT5G05160 32.542 3.92e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5593g00063 PK_Tyr_Ser-Thr 3.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5593g00063 - - gmx:100813796 496.508