Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5593g00057 ATGGAGAGTGAAACCACCAATGAAGCAAGAAGCATGTCGAAAGATGAAATAGAGAAGCTTCCTTGTTATAACTATGCAGCCAAAGACAGTGAAACTAGTACTGTGGAATGTGCAGTGTGCTTGGAGAATCAGATTCCCGGGGATAAGTGCAGATTATTGCCTGCATGCAAGCACAGTTTTCATGCCCACTGTTTGGATCAATGGCTTCTTCAGACACCCATTTGTCCTATTTGCAGGGCCAGTGTTGACTCTCAGAAGGAATGCTTTGCTATAGATATAAATGAGAGTGGCCATTTTGAGCCAAACAGGACACAGTTGAGAGAAAGCCCAGAAACTGGTTTTACAATGCAGTCCACAGAGAATTCAACGCCAGAAGGGTAG 381 0.4409 MESETTNEARSMSKDEIEKLPCYNYAAKDSETSTVECAVCLENQIPGDKCRLLPACKHSFHAHCLDQWLLQTPICPICRASVDSQKECFAIDINESGHFEPNRTQLRESPETGFTMQSTENSTPEG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5593g00057 126 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 9 101 - -
Pral5593g00057 126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 85 IPR013083 -
Pral5593g00057 126 ProSiteProfiles Zinc finger RING-type profile. 37 79 IPR001841 -
Pral5593g00057 126 Pfam Ring finger domain 36 79 IPR001841 -
Pral5593g00057 126 SUPERFAMILY RING/U-box 17 87 - -
Pral5593g00057 126 SMART ring_2 37 78 IPR001841 -
Pral5593g00057 126 MobiDBLite consensus disorder prediction 100 126 - -
Pral5593g00057 126 MobiDBLite consensus disorder prediction 106 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5593g00057 Pral-Chr5593 289311 289691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5593g00057 8 82 C3H Transcription Factor Family AT1G74410 41.333 2.00e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5593g00057 - K15692 lang:109353575 137.117