Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5593g00033 ATGCCTCAACGACCAAAGAGGAGGATACATTTTAGTAAATTATATTCATTTTCGTGCATAAAATCTCCCTTCAGACATGATCAATCTCAGATTGGGCAGAGGGGATACTCAAGGGTCGTATATTGCAATGACCCTGACAACCCAGAAGCTGTTCAGTTGAATTACTTAGGCAATTATGTTTCAACGACCAAGTATACGGCTTTTAATTTTATTCCCAAGTCTTTGTTTGAGCAGTTTAGGAGGGTTGCAAATATCTACTTTCTCATTGTCGCGTGTCTTTCGTTTAGTCCATTGGCACCTTTTACGGCTTTAAGTATTGTTGCACCGTTGCTGGTGGTGATGGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGAAGAAAACAGGATATTGAAGCAAACAACCAAAAGGTTAATGTGCTCAGTGGAAATACATTTGTGGAGACCAGATGGAAGAAACTCCGGGTGGGTGATGTCATCAAAGTGTATAAGGATGAATACTTCCCTGCTGATCTTCTTTTGCTTTCATCGAGTTATGAGGATGGGGTTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACCAATCTAAAACTAAAGCATGCTTTGGAAGTCACAACTCATCTTCACGATGAAAAATCCCTTGAAAAGTTTAGGGCAGTGATCAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTGTTGGAACCTTGTACTATGAAGACAAAGAATATCCGCTTTCATTGCAACAGATTCTTTTAAGGGACTCCAAGCTGAGAAACACTGAATATGTATATGCTGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAGAATGCCACTGAACCACCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAAGTAATCTACATCCTCTTTAGCACCTTGGTCTTGATATCATTTATTGGCTCTGTCTATTTTGGAATTGAGACAAAAAGGGATCTTCATGATGGCAAGTACAGAAGATGGTATCTTCGTCCAGACAATACAACAGTGTTTTATGATCCTAGAAGGGCAACACTTGCTGCTATTCTTCATTTTCTAACTGCCCTTATGTTGTATGGATATCTAATTCCCATCTCACTATATGTATCCATTGAAATTGTGAAAGTCTTGCAGAGTGTTTTCATCAACCATGATCGGGAAATGTATTATGAAGAAGCTGATAGGCCAGCTCATGCACGCACATCTAATTTAAATGAGGGACTTGGGCAGGTTGATACTATATTGTCTGACAAAACAGGTACTTTGACATGCAACTCCATGGAGTTTGTGAAATGCTCCATAGCAGGCACTCCATATGGTCGTGGTAGGACAGAAGTGGAGAAAGCACTTGCACGGAGGGGGAGAAATCAGGAACTGGAAGCCGATGGTTTATCACCTGATTTACAGGGCCAGAATAATGATGCTGTGGACTCCAGGCAACCAGTTAAGGGTTTCAACTTTAGAGATGAACGTATAATGAATGGGAAATGGGTTAATGAACCTCATTCAGACGTCATACAGAAATTCTTCAGAGTTTTAGCAATCTGTCATACAGCTATTCCAGATGTAGATGAACAATCTGGAGAAATTTCCTATGAAGCAGAGTCACCAGATGAAGCAGCTTTTGTCATTGCTGCAAGGGAACTTGGTTTTGAATTTTTTGAAAGGACACAAACAAGCATATCATTGCATGAATTGGACTATGACAGCGGAGAAAAGGTTGACAGAGTATACGAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATTGTAAGGAATGAAGAAGATCACCTCTTGCTCCTATGCAAGGGTGCAGACAGTGTTATGCTTGAAAGGCTCTCCCAAGATGGAAGAAAATTTGAGGCTGAGACTGTAGATCATATCAAAAGATATTCTGAGGCAGGTTTAAGAACTCTGGTAATCGCATATCGTGAACTTGGTGAAGAAGAATATAAGTTGTGGGAAAGGGAGTTTTTAAAAGCCAAAACTTCTCTAGCTGCAGACCGTGATGTGTTGGTGGATGCTGCTGCTGAGAAGATGGAAAGAGATTTGATTCTTCTTGGTGCAACAGCAGTTGAGGACAGACTTCAGAAAGGGGTTCCTGAATGCATCGATAAGCTTGCTCAGGCAGGAATAAAATTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTTAACATCGGGTATGCTTGCAGCTTACTTAGGCAAGACATGAAACAGATAGTGATAACTCTGGATTCACCAGATATCCTATCCTTAGAAAAACAAGGGGACAAGGAGGCTCTTACAAAGGCCTCCCTTGAAAGCATTAAGAAGCAAATCAGAGAGGGAATATCCCAAATCAAGCCTGCAAAAGAGAGTTCTAAAGAAACTTATACTGAATTCGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAACGTTGAGAAGTCATTTTTTGATCTGGCCATTAGTTGTGCTTCGGTCATTTGTTGCCGATCTTCACCCAAACAGAAAGCTCGTGTTACAAGATTGGTGAAATTGGGAACTGGGAAGACAACACTATCAATAGGTGATGGTGCAAACGATGTTGGCATGCTTCAGGAGGCTGATATAGGAGTTGGTATCAGTGGTGCCGAAGGGATGCAGGCAGTGATGGCAAGTGATTTTGCAGTAGCTCAGTTTCAATTTCTGGAGCGTTTGTTGTTGGTACACGGCCACTGGTGTTATAGACGAATTGCAATGATGATATGCTACTTTTTCTATAAGAACATTGCATTTGGATTTACTCTGTTTTGGTATGAAGCGTACGCTTCTTTCTCTGGACAACCTGCATACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCTGTAATTGCTCTGGGTGTTTTTGATCAGGATGTTTCTGCCCGACTTTGCCTCAAGGTACCCTTTTTATATCTTGAGGGAATAAAGGACATCCTGTTCAGCTGGCCGCGGATTCTCGGGTGGATGTTTAATGGGGTCATCACTTCCTTGATTATCTTCTTCTTGACCACAAACTCTGTCATGATCCAGGCCTTCAGAAGTGATGGTCAGATGGTTGGTTGGGAAATACTAGGGGTCACGATGTATACTTGTGTGGTTTGGACTGTGAATTGCCAAATGGCACTATCCATTAACTACTTCACTTGGATCCAGCATTTGTTCATATGGGGCAGCATTGTCTTCTGGTATTTGTTCTTGCTGGTTTATGGCTATCTCCCTCCAGCCATATCCACGACAGCTTACAAGGTTCTTGTGGAAGCCTGTGCTCCCAGTGGTCTCTATTGGCTTGTTACTCTCTTCGTTGTCGCGTGTGCTCTTCTTCCCTACTTCTCGTATAGGTCTTTCCAGACGCGGTTCCTACCAATGTACCATGATATTATTCAGAAAAAACAAGTGGAAGGGTCCGAAACTGAGGCATCTAAAGATCGGCCGAAAAGTGTTGAGGGCAAGCTAAGCCATCTCAGAGAAAGATTGAAGCGAAGGGACTTGTAA 3570 0.4171 MPQRPKRRIHFSKLYSFSCIKSPFRHDQSQIGQRGYSRVVYCNDPDNPEAVQLNYLGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACLSFSPLAPFTALSIVAPLLVVMGATMAKEAVEDWRRRKQDIEANNQKVNVLSGNTFVETRWKKLRVGDVIKVYKDEYFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEVTTHLHDEKSLEKFRAVIKCEDPNENLYSFVGTLYYEDKEYPLSLQQILLRDSKLRNTEYVYAVVIFTGHDTKVMQNATEPPSKRSKIERKMDKVIYILFSTLVLISFIGSVYFGIETKRDLHDGKYRRWYLRPDNTTVFYDPRRATLAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSVFINHDREMYYEEADRPAHARTSNLNEGLGQVDTILSDKTGTLTCNSMEFVKCSIAGTPYGRGRTEVEKALARRGRNQELEADGLSPDLQGQNNDAVDSRQPVKGFNFRDERIMNGKWVNEPHSDVIQKFFRVLAICHTAIPDVDEQSGEISYEAESPDEAAFVIAARELGFEFFERTQTSISLHELDYDSGEKVDRVYELLHVLEFSSSRKRMSVIVRNEEDHLLLLCKGADSVMLERLSQDGRKFEAETVDHIKRYSEAGLRTLVIAYRELGEEEYKLWEREFLKAKTSLAADRDVLVDAAAEKMERDLILLGATAVEDRLQKGVPECIDKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALTKASLESIKKQIREGISQIKPAKESSKETYTEFGLIIDGKSLDYSLNKNVEKSFFDLAISCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAVAQFQFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGFTLFWYEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKVPFLYLEGIKDILFSWPRILGWMFNGVITSLIIFFLTTNSVMIQAFRSDGQMVGWEILGVTMYTCVVWTVNCQMALSINYFTWIQHLFIWGSIVFWYLFLLVYGYLPPAISTTAYKVLVEACAPSGLYWLVTLFVVACALLPYFSYRSFQTRFLPMYHDIIQKKQVEGSETEASKDRPKSVEGKLSHLRERLKRRDL 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5593g00033 1189 FunFam Phospholipid-transporting ATPase 116 285 - -
Pral5593g00033 1189 FunFam Phospholipid-transporting ATPase 700 909 - -
Pral5593g00033 1189 Gene3D - 110 286 - -
Pral5593g00033 1189 Coils Coil 116 143 - -
Pral5593g00033 1189 Gene3D - 548 701 IPR023299 GO:0000166
Pral5593g00033 1189 Gene3D - 702 909 IPR023214 -
Pral5593g00033 1189 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Pral5593g00033 1189 SUPERFAMILY HAD-like 418 924 IPR036412 -
Pral5593g00033 1189 Pfam Phospholipid-translocating P-type ATPase C-terminal 897 1147 IPR032630 -
Pral5593g00033 1189 Pfam E1-E2 ATPase 136 328 - -
Pral5593g00033 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Pral5593g00033 1189 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 1159 - -
Pral5593g00033 1189 FunFam Phospholipid-transporting ATPase 543 701 - -
Pral5593g00033 1189 NCBIfam phospholipid-translocating P-type ATPase 55 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pral5593g00033 1189 CDD P-type_ATPase_APLT_Dnf-like 57 1029 - -
Pral5593g00033 1189 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Pral5593g00033 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 664 IPR023299 GO:0000166
Pral5593g00033 1189 MobiDBLite consensus disorder prediction 1159 1189 - -
Pral5593g00033 1189 SFLD p-type atpase 405 920 IPR044492 -
Pral5593g00033 1189 Pfam Cation transport ATPase (P-type) 541 628 - -
Pral5593g00033 1189 SFLD Haloacid Dehalogenase 405 920 - -
Pral5593g00033 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1147 IPR023298 -
Pral5593g00033 1189 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Pral5593g00033 1189 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Pral5593g00033 1189 NCBIfam HAD-IC family P-type ATPase 836 951 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5593g00033 Pral-Chr5593 187788 195343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5593g00033 9 1160 Primary Pumps ATPases AT1G68710 65.339 0.0 1626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5593g00033 K01530 - gmx:100779714 2081.99