Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5590g00005 ATGTCTATCACCATGTTCATGCTGTGCCTGTTCCTGAACATAGCTTATTCAGACAAGAACATGAGTACCGTCGGATTCATGTTTGATAAATACTTCAAGTTGGGAGCAGGCAATGATATGCAGCTCAAAAATTCCAACATGTCAGCACGAGGAATGCATGCAGATAGTGGCCTAAGTGAAGCATGGCAAGTCTTTTACAATCTTCCTCTTCGATTCAAGAATTCCAATACCACTCCTTCTGTCTTCTCTTTCTCCACCACTTTCATCTTTGCAGTAGTAGCCACCGATCCTAAATTTCACGGCCATGGACTCGCCTTCGCTATCTCGCCTAAAAGAGGAATTCCTGGAGCTCAGCCAAACCAGTATCTTGGCCTCTTCAATGCCTCCTCCAATGGTGAAAGTTCCAATCATATTGTGGCAATAGAGCTTGACACTGACCAGGATTTTCAGTTTGGTGATATTGATGACAACCATCTCGGGATTGATATTGATGGGTTGGACTCCGTCAATAAATCTTCTGCAGGTTACTATACTGATCGTGGTCGTTTCAGAAAGCTAGATCTCTCAAGTGGAGAACCGATGCAGGTTTGGGTTGAATATGATAGTACAGATCAGAAACTCAGTGTCACAATTCATCCAATAAACATGCCTAAACCTGAGACCCCTCTTGTCACGCTGAAAAGAGATCTTTCTTCTTATTTCTTTGAGTTTATGTATGTTGGATTCTCATCTTCTAGTGGTTCAAATTCTTCTCATTACATATTGGGTTGGAGTTTCAGGATGAACGGTCAAGCTGACGAGGTTCATCTTTCTCGCCTTCCTGACATTCCTGGACTTTTAGATCCAAATGAAAGGGCTGGAAGGGGGAAAGTACACAAGAAAATGTTGATGGCTATATCATCAATAGTGGGTGCTGTTATCCTTCTAATCTTGATCTATGGTGTGGTTATGATTGTAAGGAGAAGAAAATTCATTCAAGTTCTTGAAGATTGGCAAATCTTGTATGGGCCTCATCGGTTCACTTACAAGGACTTATTCATTGCAACAAAAGGGTTTAGAGAGGGTCAACTTCTTGGCAGAGGTGGTTTTGGCAGGGTGTACAAAGGAATTCTACCATTTTCCAATATTCAAATAGCAGTGAAAAGAATTTCTCATGATTCAAGACAAGGTATGAGAGAATTCATCGCAGAAATCGCAACCATCGGCCGTCTCAGGCATCCAAACTTGGTAAGACTTCTTGGCTACTGCAAAAGGAAGAAAGAACTTTTGTTAGTTTATGACTATATGTCTAATGGAAGTCTAGACAAGTTCCTTTACTGCCTTCCCAACAACGACAACAAACTCAGTTGGAAACAAAGATTCAAGATCATCAAAGATGTGGCATCTGCACTCTTATATCTTCACCAGCAGTGGGTTCAAGTTGTTATCCATAGAGACATCAAACCAGCCAATATACTGATGGACAATGACATGAATGCTAGACTTGGAGATTTTGGCCTCGCCAAGCTATGTGACCATGGAAATAATCCTCAAACATCTCATGTAGCAGGGACTCCAGGCTATATAGACCCAAAAATTGTGCAGAGTGGAAAATCAAACACATACACCGATATATATTCATTTGGGGTGTTATTACTGGAGATTGCTTGTGGAAGAAGGCCGGTGGAAACTCAGACTTCCCCGGAGAAAGTTTTGCTGATAGAATGGGTTATGGATTGTTGGGATAAAGGAGACATTTGTGAAGCAGTTGATAGAAGATTGGGGGATGCATATGAAGTGGATGAAGCTGAATTGGTTCTCAAACTTGGCTTGCTGTGTTCACATCCTATTGCTTCAGCTAGGCCTGCTATTTCTCGTGTGGTGCAATACTTAGATGGAGATTCTCAGTTGCCTGATAACTTATCAGATTTAATCAAGGCTAGAAACTTAAGCGGCTGCTCCAGTCATGTATGTTCTTCATCATTCTCTGATTTTCCTACTGGCCAAACTTCTATGGCTTCTTTAACTTTAACAGAATCATTTGCCTGCTCCGGACGCTAA 2040 0.4152 MSITMFMLCLFLNIAYSDKNMSTVGFMFDKYFKLGAGNDMQLKNSNMSARGMHADSGLSEAWQVFYNLPLRFKNSNTTPSVFSFSTTFIFAVVATDPKFHGHGLAFAISPKRGIPGAQPNQYLGLFNASSNGESSNHIVAIELDTDQDFQFGDIDDNHLGIDIDGLDSVNKSSAGYYTDRGRFRKLDLSSGEPMQVWVEYDSTDQKLSVTIHPINMPKPETPLVTLKRDLSSYFFEFMYVGFSSSSGSNSSHYILGWSFRMNGQADEVHLSRLPDIPGLLDPNERAGRGKVHKKMLMAISSIVGAVILLILIYGVVMIVRRRKFIQVLEDWQILYGPHRFTYKDLFIATKGFREGQLLGRGGFGRVYKGILPFSNIQIAVKRISHDSRQGMREFIAEIATIGRLRHPNLVRLLGYCKRKKELLLVYDYMSNGSLDKFLYCLPNNDNKLSWKQRFKIIKDVASALLYLHQQWVQVVIHRDIKPANILMDNDMNARLGDFGLAKLCDHGNNPQTSHVAGTPGYIDPKIVQSGKSNTYTDIYSFGVLLLEIACGRRPVETQTSPEKVLLIEWVMDCWDKGDICEAVDRRLGDAYEVDEAELVLKLGLLCSHPIASARPAISRVVQYLDGDSQLPDNLSDLIKARNLSGCSSHVCSSSFSDFPTGQTSMASLTLTESFACSGR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5590g00005 679 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Pral5590g00005 679 PANTHER - 49 628 - -
Pral5590g00005 679 CDD STKc_IRAK 358 626 - -
Pral5590g00005 679 SUPERFAMILY Protein kinase-like (PK-like) 334 634 IPR011009 -
Pral5590g00005 679 FunFam Lectin-domain containing receptor kinase A4.3 337 428 - -
Pral5590g00005 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 265 IPR013320 -
Pral5590g00005 679 Gene3D - 17 273 - -
Pral5590g00005 679 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Pral5590g00005 679 CDD lectin_legume_LecRK_Arcelin_ConA 63 263 IPR001220 GO:0030246
Pral5590g00005 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Pral5590g00005 679 SMART serkin_6 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5590g00005 679 ProSiteProfiles Protein kinase domain profile. 352 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5590g00005 679 Pfam Protein kinase domain 353 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5590g00005 679 FunFam L-type lectin-domain containing receptor kinase V.9 51 264 - -
Pral5590g00005 679 FunFam L-type lectin-domain containing receptor kinase S.4 429 637 - -
Pral5590g00005 679 Pfam Legume lectin domain 61 273 IPR001220 GO:0030246
Pral5590g00005 679 Gene3D Transferase(Phosphotransferase) domain 1 429 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5590g00005 Pral-Chr5590 80865 82994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5590g00005 63 679 Receptor kinase-like Gene Family AT4G29050 56.109 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral5590g00005 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5590g00005 - - pcin:129301411 1097.8