Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5590g00004 ATGGGCGGAGGTGGGAGAGTCCACAAGAAAATATTGATAGCTATATTATCACTAGTGGGTGCGGTTATCTTTCTAATCTTGATCTATGGTGTGGTTATGATTGTAAGGAGAAGAAAATTTATTCAAGTTCTTGAAGATTGGCAAGTCTTGTATGGGCCTCATAGGTTCACTTACAAAGACTTATTCATTGCAACAAAAGGGTTTAGAGAGGGCCAACTTCTTGGTAGAGGTGGTTTTGGCAGGGTATACAAAGGAATTCTACCATTTTCCAATGTTCAAATTGCAGTGAAAAGAATTTCTCATGATTCAAAACAAGGGATGAAAGAATTCGTGGCAGAAATCTCAACCATCGGCCGTCTGAGGCATCCAAACTTGGTAAGGCTTCTTGGCTACTGCAGAAGAAGAAAAGAACTGTTCTTAGTCTATGACTATATGCCTAACGGAAGTCTCGACAAGTTCCTTTACCGATTGCCCAACAACAGCATACTCAACTGGAAACATAGATTCAAGATCATCAAAGATGTGGCATCTGCACTCTTGTATCTTCACCACCAATGGGTTCAAGTTGTCGTCCACCGGGACATCAAATCAGCCAATGTACTGATTGACAATGACATGAATGCTAGACTTGGAGATTTTGGCCTCGCCAAGCTATGTGACCATGGAAATGATCCTCAAACATCCCATGTTGCAGGAACTCCAGGCTACATAGACCCAGAAATTGTGCATAGTGGAAAATCAAACACACGTACTGACATCTATTCATTTGGGGTTTTGTTGTTAGAGATTGCTTGTGGAAGAAGGCCGGTCGAAACTCAGACTTCGCCAGAGAAAGTGTTGTTAATCGAATGGGTTTTAGATTGCTGGGATAAAGGAGACATTTGTGAAGCAGTGGATAGCAGATTGAAGTTTTTGGGATAA 921 0.4148 MGGGGRVHKKILIAILSLVGAVIFLILIYGVVMIVRRRKFIQVLEDWQVLYGPHRFTYKDLFIATKGFREGQLLGRGGFGRVYKGILPFSNVQIAVKRISHDSKQGMKEFVAEISTIGRLRHPNLVRLLGYCRRRKELFLVYDYMPNGSLDKFLYRLPNNSILNWKHRFKIIKDVASALLYLHHQWVQVVVHRDIKSANVLIDNDMNARLGDFGLAKLCDHGNDPQTSHVAGTPGYIDPEIVHSGKSNTRTDIYSFGVLLLEIACGRRPVETQTSPEKVLLIEWVLDCWDKGDICEAVDSRLKFLG 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5590g00004 306 FunFam Lectin-domain containing receptor kinase A4.3 53 144 - -
Pral5590g00004 306 Gene3D Phosphorylase Kinase; domain 1 53 144 - -
Pral5590g00004 306 Gene3D Transferase(Phosphotransferase) domain 1 145 304 - -
Pral5590g00004 306 FunFam L-type lectin-domain containing receptor kinase S.4 145 305 - -
Pral5590g00004 306 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Pral5590g00004 306 PANTHER - 19 302 - -
Pral5590g00004 306 Pfam Protein kinase domain 69 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5590g00004 306 SUPERFAMILY Protein kinase-like (PK-like) 42 301 IPR011009 -
Pral5590g00004 306 SMART serkin_6 68 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5590g00004 306 ProSiteProfiles Protein kinase domain profile. 68 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5590g00004 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5590g00004 Pral-Chr5590 57586 58506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5590g00004 7 302 Receptor kinase-like Gene Family AT1G70130 64.527 3.81e-149 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral5590g00004 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5590g00004 - - pcin:129301411 528.865