Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5588g00003 AAAATACGTACATTTGCAATAGCTATGCTTTCTCCAAGGCTGATTTCTCTTCTCTTCTTCTTCTTTCTGATCCTCAACCTAACGCTAATATCTCATCACGGCACCAATGCCCAGCAAAACTTCTTGAAATTCTTCTGCAGTAACAGCATCGTCGACGATGATACCACTAAGAGTACCTTCAAAACCAACCTAAAATCCCTTTTATTTAACGTCACTTCTGACACAAAAATCAATTATGGCTTCTACAACTTGTCCTCCAGCCAAAACTACGACAGAGTCAACGTTATCGGCCTATGCCGAGGAGATGTTAAGGTACAAGATTGTCACAGTTGTCTCGCAGATTCAAGAGTTGTTCTTCTCCAAGTTTGTGCCCCTAACGTCAGAGAAGCAATCGGGTGGTACGATAACTGCTTTCTCCGATACTCTAATCGAACCATATTCGGCGTCATGCAAACACAGCCATATTTCTATCTGTGGAACACACAGGACGTGTTGCAGAAGGACCAGTTCAACTTTGTGGTGACAGAGCTGATGAAGTTCTTGAGAGAGAAAGCTGCTTCCCACAACTCTGTTCAGAAGTTTGCAGCGGCGAATGCGACGGGACCGAGCAATCAAACGATATACGGTCTTGCACGGTGCACGCCGGACTTGTTGAACAAGGATTGCAATAATTGCTTGAATGGGGCAATCTCTGAAATCCCGAAATGTTGCGATGGAATGAAAGGTGGAAGAGTGGTAAGACCCAGCTGCAACATTAGATATGAAACCTACAGCTTCTTTGATCCTACTGCTTCACAATCTTTCGCATCACCGCCGTTGCCACCATCTCCTCCGGCAGTTCTTGATTTCGTACCCAAACAAGGAAGGTGCAACTCATCCCGAGCTATAATTGCCGTGGTAGTCCCAATTATTGTGTTGCTGGCAGTGCTCATCTTTGTGGTCCTACTTAAATCCAGGAGAGCCAAAAATATTGAAACTAATAAGTCAACAAATATTTCATGTTCTGAGTTAGAGAATAAAGTACAGAAAGTAAAAACGCAAAAAGTGCAAGATGGTCGATACCGTGGAAATCCAGGAGTCAATAAAACCGGCACTGATGCCCAATCAAACTTCTTAAAATTCAACTGTACTGGGACTACTGATGATAGCAACAGTACCTTTCAGACCAATCTCAAAAACCTTTTGATGAATATCTCCAACACGCAAATCGACTATGGCTTCTACAACTTCTCCTCCGGCAGTAAATCCGACAGGGTTAACGCCATCGCACTCTGCCGAGGAGATGTTAAGGAACCAGATTGTCGCAGTTGTCTCGCAGATGCAAGGATTACTCTTCTCCAGGTTTGCCCTAACGTGAAGGAGGCGATCGGCTGGTACGATAACTGCTTCCTGCGATATTCCAACCGAACCATATTCGGTCTCATGGAAACATCGCCATATTTCTACCGGTCGGACACACATGATGTGTTGAAGAAAGACCAGTTCAAGAGCGTGGTGACGAAGATGATGAATCTTTTAAGAGACAGGGCTTCTTCCGGCAACTCTGTTCGGAAGTTCGCGGTGGCGAATGCGACAGGTCCGAGCAATCAGACGATATATGGTCTGGTACAGTGCACGCCAGACTTGTCACAGAACGCTTGCAGAGCTTGCTTGAATGGAGCAATCTCGGAAATTCCGAAATGTTGCAATGGAATGAAAGGTGGCGAAGTGTTGCGACCCAGTTGCAGCATTGTATATGAGACTTACCTCTTCTTTGATCCTGCGGCTGCACAACCATTCATATCATTACAGTCGCCGCCGTCTCCTCTTTCGCCAATTGCTCCTCCGACGGCACCCAAGAAAGAGTATCAATATTTGCATGCGTTGAAAAATGTTTTCTTATGTCGTTGTAACCTTCTTACGTACATCGTTGTAACCTTCTTACGTACATATACTTGCGCTGCCATGCGTAACGTAGCCGGAGAAGATGAAGATGAAATCATGACCGTTGAGTCATTGCAAATGGACTTTGAAACCATCAGAGCGGCAACGAATGATTTTTCTGAGGCAAATAAGCTTGGACAGGGTGGATTCGGACCTGTTTACTTGGGTAGGTTATATAATGGACAAGAGATCGCTGTAAAAAGGTTGAGTAGAGATTCTGGGCAAGGTGAAATGGAGTTTAAGAATGAAGTGTTGCTGGTGGCCAAGCTACAGCATCGGAATTTAGTGAGGTTACTTGGTTTTTGTCTCGAAAAAGAAGAAAAGCTCCTTATTTACGAGTTTGTTCCCAACAAAAGCCTTGACTGCTGCATCTTTGATTCCGTCAAAAGGGTGAAATTGAATTGGGAAAAGCGCTACAAAATCATAGAAGGCATTGCCAAAGGCCTTGTATACCTTCATCATGATTCTCGAATAAGAATTGTTCATCGTGATGTCAAAGCAGGCAACGTGCTCTTAGATGAAAAGATGAATGCTAAAATATCAGACTTTGGTATGGCAAGATTATTTGTGGTAGATCAAACTGAAGCCAAGACAAGTACAGTTGTTGGGACCCATGGATACATGGCACCAGAATACATGATGAATGGAACGTTTTCAACTAAATCAGACGTCTTCAGTTTTGGAGTATTGGTTTTAGAAATTATAAGTGGCCAGAAAAACTATCGATTTCAGAATGGAGAAAATGAGGAGCACGTAGTAAGTGCGGTTTGGAAAAACTGGACAAAAGGGACATTGGCAAATATTGTGGATCCAACGTTGATGGAGGATGCTGGGTCAAGAAGTGAAATAATGAGATGCATCCACATAGGGTTACTGTGTGTTCAAGAAAATGCAGAACACAGGCCAACAATGGCTTCCATTGTTCCAATGCTGAGTATTCATTCCATCACTCTTCCTGTTCCTTCAGAACCTTCATTTTATATCTGGAAAAGCTTACCAGGAATCAAATCAGCCGGATCAGTAAATCAGCTTTCAGTTTCAGAGCAATATCCTCGCTCCGACGCTTTGGAGAAAGATGAGTTCAAGGATGTGTTGATGCAGATGATGAGTTATCTGACAGAAAGGGCTGCTTCCAGAGACTCGCTTCGGAAGTTTGCGGTGGCGAATGCTAGTGGTCCGGGCAATCAAACCATATATGGTCTTGCACGATGCACGCCGAACTTGTCAAACAAGGATTGTGACATTTGCCTGACTGGGGCATTCTTTGATATTTCTAAATGTTGTGACGGAAAGAGAGGTGGTCGGGTGCTCCCACCCAGTTGCTACATTAGATTTGGACTTGATAGCTTCTTTGACGCTTCTACATACAATAATGCACAACCATTTATGCAGTCACCGTTGCCTCATCCCGCCTCCCAACAAGCTGAAGCTAAGGATGCTGCAGACTCATTGCAAATGGACTTTGAAACCATCAGAATGGCAATAAATGATTTTGCTGGTGCAAATAAGCTTGGACAAGGTGGATTAGGAGCCGTTTACTTGGTAAGATACTAG 3477 0.4386 KIRTFAIAMLSPRLISLLFFFFLILNLTLISHHGTNAQQNFLKFFCSNSIVDDDTTKSTFKTNLKSLLFNVTSDTKINYGFYNLSSSQNYDRVNVIGLCRGDVKVQDCHSCLADSRVVLLQVCAPNVREAIGWYDNCFLRYSNRTIFGVMQTQPYFYLWNTQDVLQKDQFNFVVTELMKFLREKAASHNSVQKFAAANATGPSNQTIYGLARCTPDLLNKDCNNCLNGAISEIPKCCDGMKGGRVVRPSCNIRYETYSFFDPTASQSFASPPLPPSPPAVLDFVPKQGRCNSSRAIIAVVVPIIVLLAVLIFVVLLKSRRAKNIETNKSTNISCSELENKVQKVKTQKVQDGRYRGNPGVNKTGTDAQSNFLKFNCTGTTDDSNSTFQTNLKNLLMNISNTQIDYGFYNFSSGSKSDRVNAIALCRGDVKEPDCRSCLADARITLLQVCPNVKEAIGWYDNCFLRYSNRTIFGLMETSPYFYRSDTHDVLKKDQFKSVVTKMMNLLRDRASSGNSVRKFAVANATGPSNQTIYGLVQCTPDLSQNACRACLNGAISEIPKCCNGMKGGEVLRPSCSIVYETYLFFDPAAAQPFISLQSPPSPLSPIAPPTAPKKEYQYLHALKNVFLCRCNLLTYIVVTFLRTYTCAAMRNVAGEDEDEIMTVESLQMDFETIRAATNDFSEANKLGQGGFGPVYLGRLYNGQEIAVKRLSRDSGQGEMEFKNEVLLVAKLQHRNLVRLLGFCLEKEEKLLIYEFVPNKSLDCCIFDSVKRVKLNWEKRYKIIEGIAKGLVYLHHDSRIRIVHRDVKAGNVLLDEKMNAKISDFGMARLFVVDQTEAKTSTVVGTHGYMAPEYMMNGTFSTKSDVFSFGVLVLEIISGQKNYRFQNGENEEHVVSAVWKNWTKGTLANIVDPTLMEDAGSRSEIMRCIHIGLLCVQENAEHRPTMASIVPMLSIHSITLPVPSEPSFYIWKSLPGIKSAGSVNQLSVSEQYPRSDALEKDEFKDVLMQMMSYLTERAASRDSLRKFAVANASGPGNQTIYGLARCTPNLSNKDCDICLTGAFFDISKCCDGKRGGRVLPPSCYIRFGLDSFFDASTYNNAQPFMQSPLPHPASQQAEAKDAADSLQMDFETIRMAINDFAGANKLGQGGLGAVYLVRY 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5588g00003 1158 FunFam Cysteine-rich receptor-like protein kinase 10 154 259 - -
Pral5588g00003 1158 ProSiteProfiles Gnk2-homologous domain profile. 152 259 IPR002902 -
Pral5588g00003 1158 Pfam Protein tyrosine and serine/threonine kinase 683 951 IPR001245 GO:0004672|GO:0006468
Pral5588g00003 1158 ProSiteProfiles Gnk2-homologous domain profile. 477 584 IPR002902 -
Pral5588g00003 1158 FunFam cysteine-rich receptor-like protein kinase 10 756 959 - -
Pral5588g00003 1158 Gene3D Transferase(Phosphotransferase) domain 1 756 958 - -
Pral5588g00003 1158 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 496 983 - -
Pral5588g00003 1158 FunFam Cysteine-rich receptor-like protein kinase 10 986 1091 - -
Pral5588g00003 1158 FunFam Cysteine-rich receptor-like protein kinase 10 479 584 - -
Pral5588g00003 1158 Gene3D - 152 259 IPR038408 -
Pral5588g00003 1158 Gene3D - 985 1091 IPR038408 -
Pral5588g00003 1158 Gene3D - 479 584 IPR038408 -
Pral5588g00003 1158 Gene3D - 368 470 IPR038408 -
Pral5588g00003 1158 Gene3D - 38 145 IPR038408 -
Pral5588g00003 1158 FunFam Cysteine-rich receptor-like protein kinase 10 645 755 - -
Pral5588g00003 1158 CDD STKc_IRAK 686 952 - -
Pral5588g00003 1158 ProSiteProfiles Gnk2-homologous domain profile. 984 1091 IPR002902 -
Pral5588g00003 1158 ProSiteProfiles Protein kinase domain profile. 680 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5588g00003 1158 SMART serkin_6 680 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5588g00003 1158 ProSiteProfiles Gnk2-homologous domain profile. 40 146 IPR002902 -
Pral5588g00003 1158 SUPERFAMILY Protein kinase-like (PK-like) 662 955 IPR011009 -
Pral5588g00003 1158 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 369 471 - -
Pral5588g00003 1158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Pral5588g00003 1158 Gene3D Phosphorylase Kinase; domain 1 643 755 - -
Pral5588g00003 1158 ProSiteProfiles Gnk2-homologous domain profile. 369 471 IPR002902 -
Pral5588g00003 1158 Pfam Salt stress response/antifungal 46 143 IPR002902 -
Pral5588g00003 1158 Pfam Salt stress response/antifungal 376 468 IPR002902 -
Pral5588g00003 1158 Pfam Salt stress response/antifungal 166 257 IPR002902 -
Pral5588g00003 1158 Pfam Salt stress response/antifungal 999 1086 IPR002902 -
Pral5588g00003 1158 Pfam Salt stress response/antifungal 492 582 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5588g00003 Pral-Chr5588 30068 54214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5588g00003 384 968 Receptor kinase-like Gene Family AT4G38830 46.678 2.68e-179 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5588g00003 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5588g00003 - - lang:109353867 702.59