Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5587g00004 ATGCCTAGTGTTTCCTTTCTCTTCTTTCTCCTTTACCTAACCCTAATTTCTCATCATGGCACTATCGCCCAGATAGGCTTCGTAAAAAGTTTCTGTGGTGAAGGCCCCACCGACAGCAATAGTTCCTTCCGATCCAACCTCAGAAACCTTTTACTAAACATGTCTTTCAACACACAAATCGACTATGGTTTCTACAACTTCTCCTCCGGCAACAACTCCGACAAAGTTTACGTCATCGGACTATGCCGAGGAGACATTACTGTACAAGATTGCCGCAATTGCATCCAAGATTCAAGGGTGATTATTCTCCAAGTGTGTGCACCTAATGCGAGGGAAGCAATCGGGTGGTACGACATGTGCTTTCTGCGATACTCAAACCGATCGATATTTGGTGTGATGGAAACATCGCCGGGTTACAATTCGTTATTAGACAGCTCTGACGCTTTGGAGAAAGACGAGTTCAAGAATGTGTTGATGCAGATGATGAGTTATCTGAGAGAAAAGGCTGCTTCCGGAGACTCGCTTCGAAAGTTTGCGGTGGCGAATGCTAGTGGTCCGGGCAATCAAACCATATACGGTCTTGCACAGTGCACGCCAGACTTGTCAAACAAAGATTGTGACATTTGCTTGAGGAGGGCAATCTCTGATATCTCTAAATGTTGTGACGGAAAGAGAGGTGGTCGGGTGGTCCAACCTAGTTGCAACATTAGATTCGGACCTGATAGCGTCGGACCCAATAGCGTCTTTGACGCTTCTGCGTACAATAATACACAACCATTCGTGCAGTCACCGTTGCCTCATCCCGCCTCCAAACAAGGAAAGAGAAACAAGTCATCAAGGATTGTTACTGCCGCGGTTGTTGCCTTCACCGCAGGACTCACCTTACTCATCTTCATCGTTGTAATATATTTAAAACCAAGAAGGAGACCCAATAAAATTGGAACTGAAGCTAAGGATGCTGCCGACTCATTGCAAATGGACTTTGAAACCATCAGAATGGCAACAAATGATTTTGCTGATGCAAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACTTGGGTAGGCTGTGTAATGGACAAGAGATTGCTGTAAAAAGGTTGAGCAGGAATTCTGGGCAAGGTGATGTGGAGTTTAAGAATGAAGTGTTGCTAATGGCCAAGCTACAGCATCGGAATTTAGTCAAGCTACTTGGTTTTTGTCATAAGAAAGAAGAAAGGCTTCTTGTTTATGAGTTCCTTCCTAACAAAAGCCTTGATTACTTCATTTTTGACCCAATCAAGAGATCATATTTAAATTGGCAAAAACGTGTCAAAATCATAGAAGGCATTTCTCGAGGTCTTCTTTATCTCCATCAAGATTCTCGAGTACGGATCATTCACCGTGATTTGAAGCCAAACAATATACTTTTAGATGAAGACATGGATGCTAAGATCTCAGATTTTGGTATGGCAAGGTTATTTGCAATCGATCAAACTCAAAGCAACACAAGTAAAATTGCTGGGACTTATGGATACATGGCACCAGAATATGTAAAACATGGAATCTTTTCAACAAAATCAGATGTTTTTAGTTTTGGAGTATTGGTTTTAGAAATTATAAGTGGCCAAAAGAATGGTGAATTCCACAATGAGGAGACCATAGAGCATATAGGAACTGTTGCTTGGAAGAGTTGGAGAAAAGGAATATTGGCAAATATTGTAGATCCAACATTATTGATTGAAGAAGGAGACTCTTCAAGAAATAAAATGATGAGATGCATCCAAATAGGGTTACTGTGCCTTCAAGTAAACACAGCTCATAGGCCATCAATGGCTTCCATTGTTACGTTGCTAAGTAGCTCTTCCTGTCCCATCCCAGTTCCTTCAGAACCATCCTTTTATAATTGGACAAGCATGCCAAGCATTGATATTCCATCATCATTATCTGGAGATCAATCTGTTGAAGAATCAAGAAATGAACTTACTTTTAGCGAGCAATTTCCTCGCTAG 1992 0.4162 MPSVSFLFFLLYLTLISHHGTIAQIGFVKSFCGEGPTDSNSSFRSNLRNLLLNMSFNTQIDYGFYNFSSGNNSDKVYVIGLCRGDITVQDCRNCIQDSRVIILQVCAPNAREAIGWYDMCFLRYSNRSIFGVMETSPGYNSLLDSSDALEKDEFKNVLMQMMSYLREKAASGDSLRKFAVANASGPGNQTIYGLAQCTPDLSNKDCDICLRRAISDISKCCDGKRGGRVVQPSCNIRFGPDSVGPNSVFDASAYNNTQPFVQSPLPHPASKQGKRNKSSRIVTAAVVAFTAGLTLLIFIVVIYLKPRRRPNKIGTEAKDAADSLQMDFETIRMATNDFADANKLGQGGFGAVYLGRLCNGQEIAVKRLSRNSGQGDVEFKNEVLLMAKLQHRNLVKLLGFCHKKEERLLVYEFLPNKSLDYFIFDPIKRSYLNWQKRVKIIEGISRGLLYLHQDSRVRIIHRDLKPNNILLDEDMDAKISDFGMARLFAIDQTQSNTSKIAGTYGYMAPEYVKHGIFSTKSDVFSFGVLVLEIISGQKNGEFHNEETIEHIGTVAWKSWRKGILANIVDPTLLIEEGDSSRNKMMRCIQIGLLCLQVNTAHRPSMASIVTLLSSSSCPIPVPSEPSFYNWTSMPSIDIPSSLSGDQSVEESRNELTFSEQFPR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5587g00004 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 655 - -
Pral5587g00004 663 Pfam Protein kinase domain 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5587g00004 663 ProSiteProfiles Protein kinase domain profile. 338 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5587g00004 663 Pfam Salt stress response/antifungal 151 238 IPR002902 -
Pral5587g00004 663 Pfam Salt stress response/antifungal 37 126 IPR002902 -
Pral5587g00004 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Pral5587g00004 663 FunFam Cysteine-rich receptor-like protein kinase 10 139 242 - -
Pral5587g00004 663 ProSiteProfiles Gnk2-homologous domain profile. 25 129 IPR002902 -
Pral5587g00004 663 CDD STKc_IRAK 344 612 - -
Pral5587g00004 663 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Pral5587g00004 663 Gene3D Transferase(Phosphotransferase) domain 1 414 617 - -
Pral5587g00004 663 MobiDBLite consensus disorder prediction 640 663 - -
Pral5587g00004 663 FunFam Cysteine-rich receptor-like protein kinase 10 305 413 - -
Pral5587g00004 663 SUPERFAMILY Protein kinase-like (PK-like) 325 634 IPR011009 -
Pral5587g00004 663 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 129 - -
Pral5587g00004 663 FunFam Cysteine-rich receptor-like protein kinase 28 414 620 - -
Pral5587g00004 663 Gene3D Phosphorylase Kinase; domain 1 303 413 - -
Pral5587g00004 663 Gene3D - 24 128 IPR038408 -
Pral5587g00004 663 Gene3D - 139 242 IPR038408 -
Pral5587g00004 663 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Pral5587g00004 663 SMART serkin_6 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5587g00004 Pral-Chr5587 34972 38886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5587g00004 7 663 Receptor kinase-like Gene Family AT4G21410 44.315 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5587g00004 Pkinase 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5587g00004 - - gmx:113000773 670.618