LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5585g00014	ATGGGGAACAAGTTATCAGGTCCTTTTCCTAAAGTTCTCACCAATATCACAACCCTCAGAAACCTGAGGATTAGTGACAATAATTTCTCTGGGAGGATACCCGATTTCATTAGCAAATTGACATCTATTGAGAAGCTGCACATTGAGGGTTGCTCGCTTGAGGGACCCATACCTTCCACCATTTCTGCCTTGAGAAGATTAAGTGATTTGAGGATAACTGATCTGAAAGGTAGAAGCTCATCTTTCCCATCATTGGGCTATATGAAATCATTGAGGACCCTTATACTGAGGAGATGCTTGATCAAAGGAAAAATCCCCTACTCTATTGGGAATATGAACAAACTGAAAATCTTAGACTTGAGTTTCAATGACTTGACTGGAAGGATACATGTCTCTTTTGACCAGCTCGACAAAGTAGACTTCATATATCTTACTGGGAACAAGCTAACAGGGACAATACCGAGCTGGGTTCTTGGAAGTAATACAAATGTTGATATTTCTGACAATAACTTTAGCTGGGACAGCTCGAGTCCAGTTGAATGTCCAAGAGGGAGTGTAAATTTAGTGGAGAGCTACTCTTCTTCTGTGGATAAACAAAAAAATGTTCACTCGTGCTTGAAAAAGAACTTTCCATGCTCACATTTGGACAGCCAATACCACTCCTTGCACATTAACTGCGGTGGCAAGGAAGAAAATATCAATGGTACTATTTATGAAAGGGACAGAGAACAAAGAGGTGCTTCAATGTTTTACTACGGCCGGAATTGGGCTCTCAGCAGCACCGGGAACTTCATGGACAATAATATTGAATCTGATCCCTATATTGTGACCAACACTTCCAAACTTCTCCGTGTCTCCGCTCCCACTTCAGAACTATACAGGACAGCTCGTTTGTCTCCCCTTTCTCTCACTTACTATGGACTCTGTCTAATGAATGGAAACTACACTGTTAGGCTTCACTTCGCAGAGATTGTGTTTGTCAATGATAGATCATTTTACAGTCTTGGGAGACGTGTATTTAACGTCTATATCCAGGGGAAGTTGGTCCTAAAGGACTTCAATATTGAGAAAGAAGCTGGTGGGACTGGAAAGCCAATTGTGAAGACATTTAATGCCACTGTCACGCAACATTCTTTGAAGATTCACTTCTACTATGCTGGAAAGGGGACGACTGGCATACCGACCAGAGGGATTTATGGACCTCTGATATCTGCCATATCAGTAGATCCTAATTTTAAACCTCCATCACCAGGGATTGGAAAGAGAAGGCATATTATATTGGTAGCTGCTATGTTAGCTGCTCTTGTGCTTCTTGTTCTGATGCTCCTAGGTATCATGAGGTGGAAGGGCTGGTTAGGAGGTCAAGACTCCGTGTATAAAGAGCTAAGAGGAATAGACCTGCAGACAGGATTATTCACATTAAGACAAATCAAAACAGCAACCGAAAACTTTGATGCTACTAACAAACTTGGAGAAGGCGGCTTTGGTTCTGTTTACAAGGGTCTGCTATCCGATGGCACTGTAATTGCAGTAAAACAACTCTCCTCGAAATCCAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGTGGAAGGGAACCAATTGATACTGATATATGAGTATATGGAAAATAATTGTCTATCACGTGCACTTTTTGGAAAAGATCCAGCCTGCAAAGCAAAACTAGACTGGACAACGCGGAGGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTATCTGCATGAAGAGTCCAGAATAAAAATCATACACAGGGATATAAAGACTAGTAATGTTTTGCTAGATAAAGATTTTAATGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTAATGAAGAAGGTGATAATACACATATCAGCACTCGAGTTGCTGGAACCATTGGTTACATGGCTCCTGAATATGCAATGCGTGGCTATTTGACTGACAAAGCAGATATTTATAGCTTTGGGGTGGTTATATTGGAAACTATCAGTGGAAAGAGCAATACAAATTATAGACCCAATGAAGAATTCGTTTACCTTCTTGATTGGGCCAATGTTCTGCAAGAGAGAGGAAATCTACTGGAGCTGGTTGATCCAGACTTAGGATCAGACTATTCAACTGAGGAGGCCATGGTTATGCTAAATGTGGCTCTCTTGTGTACCAATGCATCCCCCACACTTAGGCCAAAAATGTCCCAAGTTGTGAGCATGCTTGAAGGCCAAACAGATATTCAGGATTTGCTTTCTGACCCAGGATACTCTGCAAGTAGTTCCAAACACAGGTCCATAAGAAATCACTTCTGGCAGAACCCAGATACTGATTCCTCTAGTTCATAA	2394	0.4123	MGNKLSGPFPKVLTNITTLRNLRISDNNFSGRIPDFISKLTSIEKLHIEGCSLEGPIPSTISALRRLSDLRITDLKGRSSSFPSLGYMKSLRTLILRRCLIKGKIPYSIGNMNKLKILDLSFNDLTGRIHVSFDQLDKVDFIYLTGNKLTGTIPSWVLGSNTNVDISDNNFSWDSSSPVECPRGSVNLVESYSSSVDKQKNVHSCLKKNFPCSHLDSQYHSLHINCGGKEENINGTIYERDREQRGASMFYYGRNWALSSTGNFMDNNIESDPYIVTNTSKLLRVSAPTSELYRTARLSPLSLTYYGLCLMNGNYTVRLHFAEIVFVNDRSFYSLGRRVFNVYIQGKLVLKDFNIEKEAGGTGKPIVKTFNATVTQHSLKIHFYYAGKGTTGIPTRGIYGPLISAISVDPNFKPPSPGIGKRRHIILVAAMLAALVLLVLMLLGIMRWKGWLGGQDSVYKELRGIDLQTGLFTLRQIKTATENFDATNKLGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRALFGKDPACKAKLDWTTRRKICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEEGDNTHISTRVAGTIGYMAPEYAMRGYLTDKADIYSFGVVILETISGKSNTNYRPNEEFVYLLDWANVLQERGNLLELVDPDLGSDYSTEEAMVMLNVALLCTNASPTLRPKMSQVVSMLEGQTDIQDLLSDPGYSASSSKHRSIRNHFWQNPDTDSSSS	797

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5585g00014	797	Pfam	Protein tyrosine and serine/threonine kinase	487	756	IPR001245	GO:0004672\|GO:0006468
	Pral5585g00014	797	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	454	559	-	-
	Pral5585g00014	797	ProSiteProfiles	Protein kinase domain profile.	484	767	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5585g00014	797	CDD	STKc_IRAK	490	759	-	-
	Pral5585g00014	797	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	219	411	-	-
	Pral5585g00014	797	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	607	619	IPR008271	GO:0004672\|GO:0006468
	Pral5585g00014	797	Gene3D	Ribonuclease Inhibitor	1	196	IPR032675	-
	Pral5585g00014	797	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	560	769	-	-
	Pral5585g00014	797	SUPERFAMILY	L domain-like	2	172	-	-
	Pral5585g00014	797	Gene3D	Transferase(Phosphotransferase) domain 1	560	769	-	-
	Pral5585g00014	797	Pfam	Leucine rich repeat	90	149	IPR001611	GO:0005515
	Pral5585g00014	797	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	3	792	-	-
	Pral5585g00014	797	Gene3D	Phosphorylase Kinase; domain 1	455	559	-	-
	Pral5585g00014	797	SUPERFAMILY	Protein kinase-like (PK-like)	469	759	IPR011009	-
	Pral5585g00014	797	ProSitePatterns	Protein kinases ATP-binding region signature.	490	512	IPR017441	GO:0005524
	Pral5585g00014	797	Pfam	Malectin domain	221	406	IPR021720	-
	Pral5585g00014	797	Gene3D	-	219	410	-	-
	Pral5585g00014	797	SMART	serkin_6	484	757	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5585g00014	797	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	40	187	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5585g00014	Pral-Chr5585	56442	64142	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5585g00014	22	789	Receptor kinase-like Gene Family	AT1G07650	65.077	0.0	998

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral5585g00014		PK_Tyr_Ser-Thr	1.1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5585g00014	-		-	vun:114195543	1238.4