Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5585g00013 ATGAAGCTCAAACTGGGATGTCCCCATCTTCTGCTTTCCCTCCTCCTCCTTGGCTCCACTTCAATCTTCATGTTCCTCCCACCGATCGCTTTCGCCGCCACACCCAAGCTCACCATTAATGAAGTGAGGGCATTGAAAGAGATAGGGAAGAAGCTGGGGAAGAAGGAGTGGGACTTTGGTATAGATCCCTGCAGTGGCAAAGGCAGATGGAATGTGACAGATGAGAGGAAAGGCTTTGGCTCTGCCAGCTGTGTTATCTGTGATTGCTCCTTCAATCTCAATTCATCTTGCCATGTTGTAAGCATACTTTTTAAGGCTCAGAATATTTCCGGTACTCTTCCACCAGAGTTTTCCAAGCTTCAGCATCTCAAGCAATTGGACCTTAGTCGTAATCTCTTCACTGGTTCTATACCTCAGCAATGGGCTGCTTTGCACTTGGACCAGCTCAATCTCATGGGGAACAAGTTATCAGGTCCTTTTCCTAAAGTTCTCACCAATATCACAACCCTCAGAAACCTGAGTATTGAAGGGAACCTATTTTCAGGCCACATTCCTCCAGAGATTGGAAACTTGGTCAATTTAGAAAAAATCATTCTGTCATCAAATGCATTCACTGGAGAATTGCCACCCGCACTTTCAAAGTTGACCAAGTTGACCGATTTGAGGATTAGTGACAATAATTTCTCTGGGAGGATACCCGATTTCATTAGCAAATTGACATCTATTGAGAAGCTGCACATTGAGGGTTGCTCGCTTGAGGGACCCATACCTTCCACCATTTCTGCCTTGAGAAGATTAAGTGATTTGAGGATAACTGATCTGAAAGGTAGAAGCTCATCTTTCCCATCATTGGGCTATATGAAATCATTGAGGACCCTTATACTGAGGAGATGCTTGATCAAAGGAAAAATCCCCTACTCTATTGGGAATATGAACAAACTGAAAATCTTAGACTTGAGTTTCAATGACTTGACTGGAAGGATACATGTCTCTTTTGACCAGCTCGACAAAGTAGACTTCATATATCTTACTGGGAACAAGCTAACAGGGACAATACCGAGCTGGGTTCTTGGAAGTAATACAAATGTTGATATTTCTGACAATAACTTTAGCTGGGACAGCTCGAGTCCAGTTGAATGTCCAAGAGGGAGTGTAAATTTAGTGGAGAGCTACTCTTCTTCTGTGGATAAACAAAAAAATGTTCACTCGTGCTTGAAAAAGAACTTTCCATGCTCACATTTGGACAGCCAATACCACTCCTTGCACATTAACTGCGGTGGCAAGGAAGAAAATATCAATGGTACTATTTATGAAAGGGACAGAGAACAAAGAGGTGCTTCAATGTTTTACTACGGCCGGAATTGGGCTCTCAGCAGCACCGGGAACTTCATGGACAATAATATTGAATCTGATCCCTATATTGTGACCAACACTTCCAAACTTCTCCGTGTCTCCGCTCCCACTTCAGAACTATACAGGACAGCTCGTTTGTCTCCCCTTTCTCTCACTTACTATGGACTCTGTCTAATGAATGGAAACTACACTGTTAGGCTTCACTTCGCAGAGATTGTGTTTGTCAATGATAGATCATTTTACAGTCTTGGGAGACGTGTATTTAACGTCTATATCCAGGGGAAGTTGGTCCTAAAGGACTTCAATATTGAGAAAGAAGCTGGTGGGACTGGAAAGCCAATTGTGAAGACATTTAATGCCACTGTCACGCAACATTCTTTGAAGATTCACTTCTACTATGCTGGAAAGGGGACGACTGGCATACCGACCAGAGGGATTTATGGACCTCTGATATCTGCCATATCAGTAGATCCTAATTTTAAACCTCCATCACCAGGGATTGGAAAGAGAAGGCATATTATATTGGTAGCTGCTATGTTAGCTGCTCTTGTGCTTCTTGTTCTGATGCTCCTAGGTATCATGAGGTGGAAGGGCTGGTTAGGAGGTCAAGACTCCGTGTATAAAGAGCTAAGAGGAATAGACCTGCAGACAGGATTATTCACATTAAGACAAATCAAAACAGCAACCGAAAACTTTGATGCTACTAACAAACTTGGAGAAGGCGGCTTTGGTTCTGTTTACAAGGGTCTGCTATCCGATGGCACTGTAATTGCAGTAAAACAACTCTCCTCGAAATCCAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGTGGAAGGGAACCAATTGATACTGATATATGAGTATATGGAAAATAATTGTCTATCACGTGCACTTTTTGGAAAAGATCCAGCCTGCAAAGCAAAACTAGACTGGACAACGCGGAGGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTATCTGCATGAAGAGTCCAGAATAAAAATCATACACAGGGATATAAAGACTAGTAATGTTTTGCTAGATAAAGATTTTAATGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTAATGAAGAAGGTGATAATACACATATCAGCACTCGAGTTGCTGGAACCATTGGTTACATGGCTCCTGAATATGCAATGCGTGGCTATTTGACTGACAAAGCAGATATTTATAGCTTTGGGGTGGTTATATTGGAAACTATCAGTGGAAAGAGCAATACAAATTATAGACCCAATGAAGAATTCGTTTACCTTCTTGATTGGGCCAATGTTCTGCAAGAGAGAGGAAATCTACTGGAGCTGGTTGATCCAGACTTAGGATCAGACTATTCAACTGAGGAGGCCATGGTTATGCTAAATGTGGCTCTCTTGTGTACCAATGCATCCCCCACACTTAGGCCAAAAATGTCCCAAGTTGTGAGCATGCTTGAAGGCCAAACAGATATTCAGGATTTGCTTTCTGACCCAGGATACTCTGCAAGTAGTTCCAAACACAGGTCCATAAGAAATCACTTCTGGCAGAACCCAGATACTGATTCCTCTAGTTCATAA 2991 0.4216 MKLKLGCPHLLLSLLLLGSTSIFMFLPPIAFAATPKLTINEVRALKEIGKKLGKKEWDFGIDPCSGKGRWNVTDERKGFGSASCVICDCSFNLNSSCHVVSILFKAQNISGTLPPEFSKLQHLKQLDLSRNLFTGSIPQQWAALHLDQLNLMGNKLSGPFPKVLTNITTLRNLSIEGNLFSGHIPPEIGNLVNLEKIILSSNAFTGELPPALSKLTKLTDLRISDNNFSGRIPDFISKLTSIEKLHIEGCSLEGPIPSTISALRRLSDLRITDLKGRSSSFPSLGYMKSLRTLILRRCLIKGKIPYSIGNMNKLKILDLSFNDLTGRIHVSFDQLDKVDFIYLTGNKLTGTIPSWVLGSNTNVDISDNNFSWDSSSPVECPRGSVNLVESYSSSVDKQKNVHSCLKKNFPCSHLDSQYHSLHINCGGKEENINGTIYERDREQRGASMFYYGRNWALSSTGNFMDNNIESDPYIVTNTSKLLRVSAPTSELYRTARLSPLSLTYYGLCLMNGNYTVRLHFAEIVFVNDRSFYSLGRRVFNVYIQGKLVLKDFNIEKEAGGTGKPIVKTFNATVTQHSLKIHFYYAGKGTTGIPTRGIYGPLISAISVDPNFKPPSPGIGKRRHIILVAAMLAALVLLVLMLLGIMRWKGWLGGQDSVYKELRGIDLQTGLFTLRQIKTATENFDATNKLGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRALFGKDPACKAKLDWTTRRKICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEEGDNTHISTRVAGTIGYMAPEYAMRGYLTDKADIYSFGVVILETISGKSNTNYRPNEEFVYLLDWANVLQERGNLLELVDPDLGSDYSTEEAMVMLNVALLCTNASPTLRPKMSQVVSMLEGQTDIQDLLSDPGYSASSSKHRSIRNHFWQNPDTDSSSS 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5585g00013 996 FunFam Putative LRR receptor-like serine/threonine-protein kinase 759 968 - -
Pral5585g00013 996 Gene3D Ribonuclease Inhibitor 201 268 IPR032675 -
Pral5585g00013 996 Gene3D Phosphorylase Kinase; domain 1 654 758 - -
Pral5585g00013 996 SUPERFAMILY L domain-like 93 354 - -
Pral5585g00013 996 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 239 386 - -
Pral5585g00013 996 CDD STKc_IRAK 689 958 - -
Pral5585g00013 996 Gene3D - 418 609 - -
Pral5585g00013 996 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 43 208 - -
Pral5585g00013 996 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Pral5585g00013 996 ProSiteProfiles Protein kinase domain profile. 683 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5585g00013 996 Gene3D Ribonuclease Inhibitor 269 406 IPR032675 -
Pral5585g00013 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 418 610 - -
Pral5585g00013 996 Pfam Protein tyrosine and serine/threonine kinase 686 955 IPR001245 GO:0004672|GO:0006468
Pral5585g00013 996 Pfam Malectin domain 420 605 IPR021720 -
Pral5585g00013 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Pral5585g00013 996 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 991 - -
Pral5585g00013 996 Gene3D Ribonuclease Inhibitor 55 200 IPR032675 -
Pral5585g00013 996 SUPERFAMILY Protein kinase-like (PK-like) 668 958 IPR011009 -
Pral5585g00013 996 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 653 758 - -
Pral5585g00013 996 ProSitePatterns Protein kinases ATP-binding region signature. 689 711 IPR017441 GO:0005524
Pral5585g00013 996 SMART serkin_6 683 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5585g00013 996 Gene3D Transferase(Phosphotransferase) domain 1 759 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5585g00013 Pral-Chr5585 51967 64142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5585g00013 221 988 Receptor kinase-like Gene Family AT1G07650 65.077 0.0 997
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5585g00013 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5585g00013 - - gmx:100784864 1527.69