Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5581g00025 ATGGCGACACAAGCTTTGGTATCTTCATCGTCTCTCACCTCGTCGGTGCAGGCTGCGAGGCAGATTCTGGGAGGGAGATCAACCCAGTATCCAACTGGGTCATCTAGAAAGACTTCTTTTGTAGTGAAGGCATCTTCCACACCTCCTGTCAAGCAAGGAGCTGATAGACCCTTGTGGTTTGCATCCAAACAGAGTCTTTCCTACTTGGATGGCAGTCTTCCAGGTGACTTTGGATTTGACCCACTGGGACTCTCAGACCCAGAAGGACCTGGAGGGTTCATTGAACCCAGATGGCTAGCTTATGGTGAAATCATCAACGGACGTTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCACCTGAAATTCTAGGCAAGGCTGGTCTAATCCCTGAGGAGACAGCACTTCCATGGTTCAAAACTGGAGTGATCCCGCCTGCTGGAACCTACAACTACTGGGCTGATCCGTACACCCTCTTTGTGTTAGAAATGGCTCTAATGGGCTTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAAGCCTGGGTCCATGGGGAAGCAGTACTTCTTGGGCCTAGAGAAGGGCTTAGGAGGATCTGGTGACCCCGCGTACCCTGGAGGCCCATTCTTTAACCCCCTTGGCTTTGGGAAGGATGAGAAGTCAATGAAGGATTTGAAGCTGAAAGAAGTGAAGAATGGGAGGTTGGCTATGTTGGCTATCTTGGGATACTTTGTACAAGGTCTTGTGACTGGTGTTGGACCCTACCAGAACCTTCTGGATCATTTGGCTGATCCTGTGCACAACAATGTCTTGACCAGCCTCAAGTTCCACTAA 831 0.503 MATQALVSSSSLTSSVQAARQILGGRSTQYPTGSSRKTSFVVKASSTPPVKQGADRPLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGPGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5581g00025 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Pral5581g00025 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 271 IPR001344 GO:0009765|GO:0016020
Pral5581g00025 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Pral5581g00025 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Pral5581g00025 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5581g00025 Pral-Chr5581 154360 156067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5581g00025 19 276 Chloroplast and Mitochondria Gene Families AT1G61520 87.597 1.19e-167 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5581g00025 K08909 - qsa:O6P43_014419 513.457