Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5581g00021 ATGAGAACAAAATCTCCTGGTGGAGGCAGGGCTAAAATTTCTACAAAACCTTCCCACCCTACCGTAGGGACAATTTCTCTAGATGAAGACGATGCAGCGGTGCCTAAAACTTCTAATGAGAGCAATCGTGATCTGCTAGATGTTAGAAAGGTGGGATCAAAAGACCACGTAGATAATGTAATTGATGAGGATTCTAATAGAATCCTTCGTGAGAGTTTAGGTCATGACAACATTTTTAAAGATGTTGTGGATAGGAAGATTTGCATTCGTTGCAATGAAGGTGGAGAAATATTAGTTTGTTGTGAAAGTGGTTGTCCTGTTACTGTCCATGCAAAATGCATCAGCCGCGAACCTAAATTTGATGATATGGGAAACTACTACTGCCCTTATTGCTGGTTAAAACGAACACTGGCAGAAGTCCAAGTACTGAGGAATAAGGCCTTAACGGCGAAGAAAGATTTGTCAGACTTTTTGGATAGCAATGCAATTATGAGCAATAAATTGGCCCAAAAATATGAGGAAGCAAAAAGAAAAGAGTCCCACGAGTTATCCCTTGAGGGAAATGGGGTCTGCAGAGATTATAGGAGTAGGCAGGGAAATGGCCGTGCGTGCACACAGCCCTTGCAGAGAGTGGAAGATCAACAAAAGGAAATGCTAGGAGTGACTGCTAGTGCTGATCAACATGACATAGCAATTGAAGATGACACTCATGCAAATGCTCAAGTAGCCGATACTGGTGATTCTATGCATCATGGGGAAGAAAAGACACCAGCGCATACGGATCAGATTGATAAACCTATGGCCGGAGAGGAAGTTGATGTTCATAAAATTTCAGAAGCACATAAAACCGCGTCTGTTGAAGGAAAAGAGGGGATTGAGCCAGAGCACCCAAGATATAGTGATAAAAACGTTCATGAAGGGATTCCTGAGGATGAAGAGGAAGCATCTCCATCGAGTTCATGCCATTTGGGAAGGCACAAAGAGGGACTTTCACCTGATATTGCATTTGTCAAAGGGACACAAGAAAGTGTTGCAGTGACTGTAGATAACGAGGACACAAGGAAAGACAGAGAGAAGTTGCTCCAGAATGAATTAAGAGTGCCTTCTATGGATACTTCTATCAGTGAAACTAATGAGTCAGGTTCTGAAGCTCCCGTAGTGAAGAAAGGACGGATAAAACATATGGCACAGAGGCATCCTCAGAGAGTTAAGAATGCTGTGGGTGAAGATGGTTGTCACGAAGATGAGGAAGTTACCAGTTCTGGAACTTTTAGACACGCCCAGAAATCTTCTAAGCAAGGTAAAAAACTGACCTTACCAACTAGAAAGCGGAAGAGACTACACTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTTAAAATTCGCGAAGGAAAACCGGAATATCCCTTGGAGGAAAATTTTAGAATTTGGTTGTGATGTATTTGATAATACGCGCACCCCGGTTGATCTTAAGGATAAATGGAGGACCATGACAGCGGGGGCAGGATTATAG 1521 0.4241 MRTKSPGGGRAKISTKPSHPTVGTISLDEDDAAVPKTSNESNRDLLDVRKVGSKDHVDNVIDEDSNRILRESLGHDNIFKDVVDRKICIRCNEGGEILVCCESGCPVTVHAKCISREPKFDDMGNYYCPYCWLKRTLAEVQVLRNKALTAKKDLSDFLDSNAIMSNKLAQKYEEAKRKESHELSLEGNGVCRDYRSRQGNGRACTQPLQRVEDQQKEMLGVTASADQHDIAIEDDTHANAQVADTGDSMHHGEEKTPAHTDQIDKPMAGEEVDVHKISEAHKTASVEGKEGIEPEHPRYSDKNVHEGIPEDEEEASPSSSCHLGRHKEGLSPDIAFVKGTQESVAVTVDNEDTRKDREKLLQNELRVPSMDTSISETNESGSEAPVVKKGRIKHMAQRHPQRVKNAVGEDGCHEDEEVTSSGTFRHAQKSSKQGKKLTLPTRKRKRLHWTTEEENKLKEGVLKFAKENRNIPWRKILEFGCDVFDNTRTPVDLKDKWRTMTAGAGL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5581g00021 506 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 196 IPR013083 -
Pral5581g00021 506 MobiDBLite consensus disorder prediction 429 444 - -
Pral5581g00021 506 MobiDBLite consensus disorder prediction 403 422 - -
Pral5581g00021 506 SUPERFAMILY Homeodomain-like 444 501 IPR009057 -
Pral5581g00021 506 Pfam Myb-like DNA-binding domain 448 500 IPR001005 -
Pral5581g00021 506 SUPERFAMILY FYVE/PHD zinc finger 85 138 IPR011011 -
Pral5581g00021 506 MobiDBLite consensus disorder prediction 1 41 - -
Pral5581g00021 506 CDD SANT_TRF 449 501 - -
Pral5581g00021 506 MobiDBLite consensus disorder prediction 246 327 - -
Pral5581g00021 506 ProSitePatterns Zinc finger PHD-type signature. 88 131 IPR019786 -
Pral5581g00021 506 ProSiteProfiles Myb-like domain profile. 441 501 IPR001005 -
Pral5581g00021 506 MobiDBLite consensus disorder prediction 396 446 - -
Pral5581g00021 506 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 36 503 - -
Pral5581g00021 506 Gene3D - 449 505 - -
Pral5581g00021 506 MobiDBLite consensus disorder prediction 247 327 - -
Pral5581g00021 506 SMART sant 445 503 IPR001005 -
Pral5581g00021 506 SMART PHD_3 87 132 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5581g00021 Pral-Chr5581 108669 112640 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5581g00021 Myb_DNA-binding 1.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5581g00021 - - pcin:129302004 758.829