Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5581g00007 ATGAAGGAGTTGGCATTTTGCAGTGTTGTTGAGAGCACTGGGGAGAGAGTAACAGATCTGGAAGTAGGCGATGTTGTGATTCCTACATCTATCGGTGAATGTCAAGAATGTGAGAACTGCATTTCAGGGGAATCCAACCTGTGCCTGAAATACCCTCTTACGTTAAATGGCTTAATGCTGGATAACACATCAAGGATGTCCATTAGAGGTCAAAAGATATACCAACTTTTTAGCTGCTCCACGTTTGCAGAATACATGGTAACTGAAGCAAATTACCTCGTCAAAGTTGATCCCAACATTGACCTTGCCCATGCTAGCATCATCTCGTGTGGGTTTTCTACTGGTTTTGGAGCTGTTTGGAAGGAAGCAAAGGTTGAAAGAGGATCATCCGTAGCTGTGTTTGGCCTTGGTGGTGTTGGATTAGGTGCTATAAGCGCAGCCAAGATGATGGGGGCAAGTAAGATAATTGGGATTGACAAGAATGAAATGAAGAAATCAAAAGGAGAAGCTTTTGGAATGACAGATTTTATCAATCCTGATGCCTGTGATAAATCAGTTTCAGAGTTGCTTAAGGAACTGAGTAATGGAATGGGTGTAGACTGTTCCTTTGAGTGCACTGGAGTTGCCTCTTTACTTACTCAAGCCTTTCAAGCCACGAAATTGGGAAAGGGAAAGACAATAGCAATAGGTGCGGTATCTCAAGAATTTGTGCATATCGACTTTTCCTCGCTTATATTTGGGAGAACTTTAAAAGGTTCCATTTTTGGAGGATTGAAACCTAAGTCTGACCTGCCCTTCATAGTTGACAAATGCTTGAAAAAGGAGTTCCCTCTTGACGAATTTCTTACTCATGAGGTGTCACTAGAAGAGATGGGTAAAGCTTTGGAGCTACTAAAACAACCAGACTGTGTCAAAGTTATCATAAGGATATCTATATGA 939 0.4153 MKELAFCSVVESTGERVTDLEVGDVVIPTSIGECQECENCISGESNLCLKYPLTLNGLMLDNTSRMSIRGQKIYQLFSCSTFAEYMVTEANYLVKVDPNIDLAHASIISCGFSTGFGAVWKEAKVERGSSVAVFGLGGVGLGAISAAKMMGASKIIGIDKNEMKKSKGEAFGMTDFINPDACDKSVSELLKELSNGMGVDCSFECTGVASLLTQAFQATKLGKGKTIAIGAVSQEFVHIDFSSLIFGRTLKGSIFGGLKPKSDLPFIVDKCLKKEFPLDEFLTHEVSLEEMGKALELLKQPDCVKVIIRISI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5581g00007 312 Pfam Zinc-binding dehydrogenase 138 257 IPR013149 -
Pral5581g00007 312 Gene3D - 115 253 - -
Pral5581g00007 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 273 IPR036291 -
Pral5581g00007 312 Gene3D - 7 305 - -
Pral5581g00007 312 FunFam S-(hydroxymethyl)glutathione dehydrogenase 115 253 - -
Pral5581g00007 312 Pfam Alcohol dehydrogenase GroES-like domain 7 96 IPR013154 -
Pral5581g00007 312 SUPERFAMILY GroES-like 9 126 IPR011032 -
Pral5581g00007 312 SUPERFAMILY GroES-like 261 308 IPR011032 -
Pral5581g00007 312 PANTHER ALCOHOL DEHYDROGENASE 8 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5581g00007 Pral-Chr5581 35384 37863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5581g00007 9 250 Monolignol Biosynthesis Gene Families AT4G37980 25.410 7.07e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5581g00007 K00121 - qsa:O6P43_001731 427.557