Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5581g00003 ATGGGTTATATATGTGACTTCTGTGGAGATCAGAGGTCCATGGTGTACTGCCGTTCTGATGCTGCATGTCTATGTTTGTCATGTGATCGGAATGTTCATTCTGCTAATGCTCTTTCTAAGCGCCATTCTAGAAACCTTTTATGTGAGAGATGTAATGCACAACCTGCTCATGTACGGTGTTCTGAAGAGAGGATTACGCTATGTCAGAACTGTGATTGGTTAGGTCATGGTCCCACTACATCTTATTCAACACATAAGAGGCCAACGGTCAATTGCTACTCTGGCTGTCCTTCAGCAGAAGAATTTTCTTCAATATGGCCATTTGTCTTGGATATCCCCTCTATGCGTGAAACTACCTGTGAGCAGGAACTAGGTTTGATGACCATTAATGAGAACAGCAACAAGAGTGCCTGTGTTCCTCCAGAAAGCCAGAATTTATCTGGTTCTGCTCAAGTAACTGATTTGCAAAGCTTTGACAAGTCTTGGGTTGGTGCCTCTGCCATACCTGAGTCAAGCTCAGAACGTCGTATTCTAGGGCCATCAACTGGACCTACCAAGGAGTGTTTGCCCAAGTTATATTGTCCCAGTACAAAAGATCCTGTGCCATATGAAAATGAAGATGATGATTTGTATGGTGATTTTGACATGGATGAAGTGGATCTGAGTCTCGAGAACTATGAGGAACTTTTTGGTATGACTATTAGTCATTCTGAAGAACTCTTTGAAAATGGTGGAATTGATAGCTTGTTTGGGACAAAGGATGCGTCTGCTGCTGATTCCAATTGTCAGGGATCTATTGCTGTTGAGGGTTCATCGGCTGGACTGGTCAACGCGGTGCAACCAGCATACAGCAATGCAGCATCTGCAGATTCTACTGTGAGCGCCAAAACTGAACCGATTCTTTGTTTTGCGGGAAAGCAAGGGCAATCGAATCTCTCTTTTTCTGGGGTCAATGGAGAGAGTGGTGCTGGAGATTATCAAGACTGTGGTGCCTCTTCAATGCTTCTCATGGGGGAGCCTCCTTGGTGTCCTCCTTGTCCTGAGAATTCAGTACAATCTGCCAACCGCAGCGATGCTGTCATGCGTTATAAGGAAAAGAAGAAGACACGCAAGTTTGACAAGAAAGTGAGGTATGCCTCTCGCAAGGCTAGAGCCGATGTCCGAAAGCGCGTGAAGGGCCGGTTTGTCAAAGCTGGGGAAGCTTATGATTATGACCCTTTGAGCCCGACCAGAAGCTACTGA 1242 0.4549 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRNLLCERCNAQPAHVRCSEERITLCQNCDWLGHGPTTSYSTHKRPTVNCYSGCPSAEEFSSIWPFVLDIPSMRETTCEQELGLMTINENSNKSACVPPESQNLSGSAQVTDLQSFDKSWVGASAIPESSSERRILGPSTGPTKECLPKLYCPSTKDPVPYENEDDDLYGDFDMDEVDLSLENYEELFGMTISHSEELFENGGIDSLFGTKDASAADSNCQGSIAVEGSSAGLVNAVQPAYSNAASADSTVSAKTEPILCFAGKQGQSNLSFSGVNGESGAGDYQDCGASSMLLMGEPPWCPPCPENSVQSANRSDAVMRYKEKKKTRKFDKKVRYASRKARADVRKRVKGRFVKAGEAYDYDPLSPTRSY 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5581g00003 413 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pral5581g00003 413 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 401 - -
Pral5581g00003 413 CDD Bbox1_BBX-like 4 44 - -
Pral5581g00003 413 ProSiteProfiles CCT domain profile. 356 398 IPR010402 GO:0005515
Pral5581g00003 413 Pfam CCT motif 356 398 IPR010402 GO:0005515
Pral5581g00003 413 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pral5581g00003 413 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Pral5581g00003 413 CDD Bbox1_BBX-like 47 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5581g00003 Pral-Chr5581 22401 27598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5581g00003 1 413 C2C2-CO-like Transcription Factor Family AT3G07650 56.542 2.93e-154 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Pral5581g00003 CCT 3.9e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5581g00003 - - gmx:100796748 647.506