Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5576g00004 ATGGAAGAAACATTTGTTCCCTTCGAAGGGATCAAGAATGACCTCAAAGCAAGAATTGAATGTTACAAAGAAGATTGGACAAGTGGTTTCCGAGCTGGTATCAGGATTCTTGCCCCGACCACATACATATTTTTTGCTTCAGCAATTCCAGTTATTTCTTTTGGAGAGCAACTGGATAGAAATACAGATGGAACTCTGACTGCAGTGCAGACTCTTGCATCAACAGCACTCTGTGGTGTTATCCATTCAATCCTTGGAGGGCAACCTCTCCTCATTCTTGGTGTGGCTGAGCCGACGGTTTTAATGTATACCTTTATGTATAATTTTGCTAAGGATCGAAAGGATTTGGGTCATAAACTCTTCCTTCCCTGGACTGGATGGGTGTGTGCTTGGACAGCCTTGTTGCTCTTTTTGTTGGCCGTTCTTGGTGCATGCTCCATAATCAACAGGTTCACACGCATTGCTGGGGAATTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCCATAAGGGGAGTTGTGGAAGAGTTTGGGGTACCCAAGAACCGGAGAGAAAGTACCAGTTCAATTGCACTCGAACCATCTTGGCTGTTTGGCAATGGGATGTTTGCTTTGGTTTTGTCATTTGGCCTTATTTTTACAGCACTGCAAAGTCGTAAAGCTAGATCTTGGCGCTATGGGACAGGTTGGCTTAGGGGATTTATAGCTGATTATGGAGTTCCACTATTGGTGCTAGTATGGACCGCTGTATCTTACATACCAGTCAATGAGGTCCCAAAGGGAATCCCCAGGCGACTCTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAATTGGACAGTTATCAAGGAAATGTTGGATGTTCCTGCTGTGTATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTACTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCACAGCAGAAGGAGTTCAATCTAAGAAAACCTTCTTCCTATCATTATGACCTTCTTCTTTTGGGCTTTTTGACTCTGTTGTGTGGGCTTATTGGAATCCCTCCTTCCAATGGGGTCATTCCACAATCTCCAATGCATACAAAAAGCTTGGCCACTCTAAAACATCAGCTTCTGAGGAGAAAGCTTAGATCAACTGCACGACAAAGTATGCAGAAAAATATGAACCTCAGCCAGTTGTACGAGAATATGCAAGCAGCATATGATGAAATGCACACTCCACTGGTCCATCAAATGCCACCTGCACTGAGGTTGAAAGAGCTGAAGGAGTCCACCATCCAACTTGCTTCTAGTCAAGGATACGTCGATGCCCCTGTTGATGAGATTGTGTTTGATGTGGAAAAGGATATTGATGATCTTTTGCCTGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTGATGGTTGGTGGTTGTGTTGCTGCTATGCCTGTTCTGAAGAAGATACCAACTTCAGTCCTATGGGGCTACTTCGCTTTCATGGCTATAGAGAGTCTGCCGGGAAATCAGTTTTGGGAGAGAGTATTGTTTCTGTTAACTGCTCCAAATCGAAGATACAAGGTGCTGGAGAAAATGCACGCAACTTTTCTTGAGACTGTGCCCTTCAAAACAGTTGCCATGTTTACCTTGTTACAAACGGCTTACTTGCTTGCGTGCTTTGGTATAACTTGGATACCAATTGCCGGGGTCCTTTTCCCGTTGTTAATCATGCTTCTTGTCCCAGCACGCCAATATGTCCTTCCTAAGTTTTTTAAAGGAGTACATCTTCAAGAGTTGGATGCTGCAGCCTACGAGGAATCCCCTGCTGTTGCTTTCAACATGGCATTTGAAGATCCAAGTTGTCAAACTCAAGCAACAACTGTTAACATTAGTGGCGGGGAAATTCTTGATGAAATTATTACAAGGAGCCGTGGGGAGATTCGTGGCATCCACAGCCCAAAAACAAGTAGTTCGACGCCAACTTCATTTGGTGATATAAGACCTGCTAATAGTCCACAGCTAGTGCGAAGGGTGCACAGCCCTCGAGTAACTGAATTGAGAGGGGAAAGCAGCCTAGTATCAGCCAAAAAAGAGATCATGCTAAGGCAAACTCCTAGTCCAGGGTCATCGATTCCTAGACAAGATCCTAAAGGTTCATCTTCGAGCTAA 2175 0.4423 MEETFVPFEGIKNDLKARIECYKEDWTSGFRAGIRILAPTTYIFFASAIPVISFGEQLDRNTDGTLTAVQTLASTALCGVIHSILGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCAWTALLLFLLAVLGACSIINRFTRIAGELFGLLIAMLFMQQAIRGVVEEFGVPKNRRESTSSIALEPSWLFGNGMFALVLSFGLIFTALQSRKARSWRYGTGWLRGFIADYGVPLLVLVWTAVSYIPVNEVPKGIPRRLFSPNPWSPGAYSNWTVIKEMLDVPAVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRRKLRSTARQSMQKNMNLSQLYENMQAAYDEMHTPLVHQMPPALRLKELKESTIQLASSQGYVDAPVDEIVFDVEKDIDDLLPVEVKEQRLSNLLQALMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERVLFLLTAPNRRYKVLEKMHATFLETVPFKTVAMFTLLQTAYLLACFGITWIPIAGVLFPLLIMLLVPARQYVLPKFFKGVHLQELDAAAYEESPAVAFNMAFEDPSCQTQATTVNISGGEILDEIITRSRGEIRGIHSPKTSSSTPTSFGDIRPANSPQLVRRVHSPRVTELRGESSLVSAKKEIMLRQTPSPGSSIPRQDPKGSSSS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5576g00004 724 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Pral5576g00004 724 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Pral5576g00004 724 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Pral5576g00004 724 MobiDBLite consensus disorder prediction 705 724 - -
Pral5576g00004 724 MobiDBLite consensus disorder prediction 683 724 - -
Pral5576g00004 724 MobiDBLite consensus disorder prediction 652 670 - -
Pral5576g00004 724 Gene3D Helical hairpin bin 18 60 - -
Pral5576g00004 724 MobiDBLite consensus disorder prediction 651 671 - -
Pral5576g00004 724 FunFam probable boron transporter 2 18 60 - -
Pral5576g00004 724 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5576g00004 Pral-Chr5576 17964 22130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5576g00004 1 693 Antiporters AT3G62270 74.315 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5576g00004 K24194 - gmx:100793554 1233.01