Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5576g00002 ATGCAGAGCTCAGCCTTCACTCTTTCTCCTTCTCTTCCTCTTCTCAAGTCCCGCTCTCGCAATCCTTGTCGCTTCGATCCCATACGCCTCTCTGCTTCTTCCTCTTCCAAACCCAATGTCGCTTGCTCCTCCACTTCTTCCACGCGCCGATCCTGGTCCCTTGCTTCTTCTTCATCCCCTTTTGCTTTCAGGCCCTGGACATCTTTCACCACACTTTCTTCCTCCGATCCTGATGCATCTCCTTTTGAGGCCCGGGCTGCTTCCGTGCCTGAGAGCAGCAGTGAGGCATCCAGTAGTATGGCCAACACGTTGGTGCTCGGATCCTTATTTGGTTTCTGGTACCTCTTCAATATCTACTTCAATATCTACAACAAGCAGGTCTTGAAGGCGTTCCATTTCCCAGTCACCATCACTGCACTTCAATTTGCTGTTGGGACTATCCTTGTATTATTTATGTGGGGTTTCAATCTGTATAAAAGGCCTAAAATCAGTGGTGCCCAGCTTGCGGCAATACTTCCACTGGCTTTTGTACATACCTTAGGGAACCTTTTCACAAATATGAGTCTTGGAAAGGTAGCCGTATCTTTCACTCACACAATCAAAGCAATGGAGCCCTTCTTTTCAGTGATCCTTTCTGCTATGTTCCTTGGAGAGTTCCCTACACTTTGGGTAGTTTCTTCCCTAGTGCCCATTGTTGGTGGAGTGGCACTTGCATCAGTTACTGAGGCCTCCTTCAACTGGGCTGGATTTTGGAGTGCAATGGCATCCAATTTGACAAATCAGTCTCGCAATGTTCTCAGCAAAAAAGTCATGGTTAAGAAAGATGATTCTATGGACAATATAACCCTCTTCTCAATAATAACCGTTATGTCCTTCTTCATGTTAGCCCCAGTGGCTGTATTCATGGAGGGTGTTAAACTCACCCCTGCATATCTGCAATCTGCGGGGTTGAATGTAAGACAAATATACATCAGATCACTTATTGCTGCACTGTGTTTCCATGCATATCAGCAGGTTTCTTACATGATATTACAAAGGGTGTCACCTGTTACCCACTCTGTGGGTAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTTTCACCCATTAACGCTTTTGGGACTGGCATAGCGCTTGCTGGCGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGCCAAAGGCCAAGACAGCGTAA 1221 0.4636 MQSSAFTLSPSLPLLKSRSRNPCRFDPIRLSASSSSKPNVACSSTSSTRRSWSLASSSSPFAFRPWTSFTTLSSSDPDASPFEARAASVPESSSEASSSMANTLVLGSLFGFWYLFNIYFNIYNKQVLKAFHFPVTITALQFAVGTILVLFMWGFNLYKRPKISGAQLAAILPLAFVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEFPTLWVVSSLVPIVGGVALASVTEASFNWAGFWSAMASNLTNQSRNVLSKKVMVKKDDSMDNITLFSIITVMSFFMLAPVAVFMEGVKLTPAYLQSAGLNVRQIYIRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINAFGTGIALAGVFLYSRVKRIKPKAKTA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5576g00002 406 MobiDBLite consensus disorder prediction 1 21 - -
Pral5576g00002 406 MobiDBLite consensus disorder prediction 28 46 - -
Pral5576g00002 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 309 398 - -
Pral5576g00002 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 240 - -
Pral5576g00002 406 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 404 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pral5576g00002 406 MobiDBLite consensus disorder prediction 27 46 - -
Pral5576g00002 406 Pfam Triose-phosphate Transporter family 105 394 IPR004853 -
Pral5576g00002 406 PANTHER SOLUTE CARRIER FAMILY 35 106 398 - -
Pral5576g00002 406 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5576g00002 Pral-Chr5576 8634 11934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5576g00002 1 406 Antiporters AT5G33320 73.301 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5576g00002 K15283 - csav:115709322 558.91