Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5575g00009 ATGTTTGCCATAGCTTCTCCATCATCTTCTTCTTCTTCCAAGAAATATGATGTGTTTCTGAGTTTCAGAGGAGAGGATACTCGCAGATCCTTCACCAGCCATCTCCATGATGCCTTGTGCCGCGGGGATATTAAGACATACATAGATTATGAGCTCCCAAAAGGTGATGACATCTCCCAATCACTCATTGAAGCAATTCAGGATTCATCCATCTCTGTGGTGGTCTTCTCTCAAAACTATGCCACTTCAAAATGGTGTTTGAATGAGCTCCTTGAGATCCTTCGCTGCAAACAACATCAGGCACAGATTGTTGTTCCTATCTTCTACAAAATTGACCCATCTCATGTACGCAAACAAAACGGAGCTTATGAGAAAGCATTCACAGAACATTTGGAGAAAAACTCAGAGAAGGCGAAAGAGTGGAAACAAGCACTTGTTAAGATTGCAAATCTAGCAGGATGGGACTCCTGCAACTACAGGGATGAAGCAGAACTCATTCAAAATATTGTCACGGACATCAACAAAAAACTAAACCGTGGGTCCCCAACAACTGTATTAGAAAATATTGTTGGAATTGATGAGAATTTAGATCAAATTGAGTCGTTGTTAGAAGAATTCTCAACAATTGGGATTTGGGGGATGGGCGGGATGGGCAAAACAACAATGGCTAAGGTTGTATTTGCCAAGCTCCGCTCTCAATTTGATAGTTGCTGCTTCTTGGAAAATTTTAGGGAAGAGTCAGAAAAGCATGGGTCAAAATATGTACGTGACAAACTTTTCAGTGCACTATTGAAGGATACATCTCTTGGAAGGCTCAGTCATAGAAAAGTTTTGATTGTACTTGATGATGTTAGCAACACGCAGAAGTTAGATGATTTGGAAAGGGAAGCTCCTCATTTGGGACCTGGTAGTAAAGTCATCATAACAAGTAGAGATAAGCAAGTGCTTAATGGAAGAGTTGAGAGAATACATGAGGCCAAGGCATTGAGCTACAACAATTCCCTTGAGCTTTTCAACCATAAAGCCTTCCGCAAACACGGTTTTAAAGGTGAATATAAAGAGCTAGTTGAAAGAGCTCTTGCTTATGCCCAAGGCGTTCCATTAGCCTTAACCATTTTGGGTTCATTCCTTTATTCCAGAACCGTACAACAATGGGAAAGTGCATTGAGGAAATTGGAAAGGAAAGCCGATAAAGATATTCAAGCTGTGTTAGAATTGAGCTATGACGGACTTGATGATGAAGCGAAGGATATATTTTTAGACATTGCTTTTTTTTTTAAAGGTGAATGGGGAGAATATGTAAAAGCAACGCTAGAGGGCTCTGGCTTTCACGCAAGCATTGGCTTGGGAATTCTTGTGGATAAGGCGTTGATAAGTTTTCGTTATGGTGTGGTATGGATGCATGATTTAATTCAATCAATGGCTTTCGAAATTGTTCGCAAAGAGTGTAAGAATCCAGGAGGACGTAGTCGACTATGGAATTCCGATGAGATCATCGACGTCCTAAAAAATAATCAAGGAAGTGATGCAATTCAAGGCATAAGTTTAAGTTTGTCTCAAATTAAAGAATTACAATTGAGTGCTGATTCCTTTGGAAAGATAACAAATTTAAGGGTTCTGAAAATCTATTCATTCACACATAGAAGATCGTGTGTTGTGAATCTTCCTTCAGGGCTTGAATCATTTCCCAATTCGTTAAGGTATCTTCAGTGGGACAATTTTCCTTTAAAGTCTTTACCATTGTCAATTTGTGCCGAGAAGCTAGTTGAACTTCGGATGCCTGGTAGCTGCCTTCAAAAACTATGGGATGGCAAGCAGGACTTGGTGAATTTGAGGCATGTAAACCTTATGGAATCCGAAAAATTGATAGAGTTGCCAGATTTGTCAGCAGCTAAAACACTTAAATACATTGAACTTGGATACTGTGAAAGTTTATGCCATCTTCATCCATCCATTTTATCTCTTCCGAGATTGAAGTATGTGGATCTTGCGCATTGCAAAAACCTAAAGAGTTTGAAAACAGAGAGTCAATCAAAATCGCTCTTGCGACTAAATGTGGCTAGGTGCTCTGGTCTCAAGGAATTTTCATTCTCTTCGGACAAACTTACTTTTTTATGTTTACATACCTCACCAGTCGAGAATATAGACTTTTCAATGGGGCATATGGAGAACCTTTGGAGACTCTCTCTTAATGGTTTGAAACTAAAGAATCTTCCAATTAACGACATTTGTTGCATGAGATCTCTTAAACAGCTTGCTCTTGATTATTGCACCGGAGTGATTGACAAATCAAAGCTCCATAGCTTATTTGATGCTTTGCGATATCTGGAATCACTTTCTTTGAGAGGGTCATGCACATTAACGGAACTTCCAGACAATATCAAGCATCTCTCGAGGCTACAGTCTCTTGATGTAAGCTATTGCAGGGACCTTCAATCTTTACCGGAGCTTCCTCCATCCATTGAAGAATTACATGCCAACAGCTGCACATCATTAAAGACGCTACAATTCACTTCTCATATTGAATCTCCATCATTGGCAGATGAAATAATGTTGGGTTCAAACCCCCGTTCATCAGTTAGTTATCTCCAAAACCTTCGAGAGCTTAGTCTTGGTGGTTGTGAACAGTTGTATGAACTTCCTGAAAGCATCGGCTCCTTGTCTTCATTGTCTTCACTGGATTTGAGTGGTTGTGAACAGTTGTATGAACTCCCTGAAAGCATCGGCTCCTTATCTTCATTGTCTTCACTGGATTTGAGTGGAAGTACTGTAGCGAGCTTGCCTGCTAGTATCAAGTATCTCTCAAATCTAAAAGACATACGCTTGACCAATTGTACAAGACTTCGTTCTCTGCCAGAACTGCTGCCATCCACAGAAACCGTCTTCGCTTGTGGTTGCATATCATTGGAGATTGTACCCATTTCAATACCTTTTGCACCACAATTGAAGTTGCTACTTCTGAGAGATTGCTTGAAATTGGAGAACTGCTCTCTGTCTCATGTGACGGAAAGTACTTATTTCTTAATGAAGCGATTGGTGTACACAAACCGAGGCGGTGCTGTCTGTTACCCTGGAATAAAAGTTCCAAAGTGGTTTGGATCTAATGAGAGAACAGAGGCTTCCAACTGTATAACTATTGAGTCTCCTTCAGCCACAAACGACCTAATCGGCTTCATCTTTTGCTGTATTCTTTCTCGGCATTCCTATAACGATGATGTGCGATGCCAAATTTATTTTGATGGTAAGCGGTGCGTATCCTCAAAGTTTGGTTTGTATGCGGATGAGCATTTGCAATGTTATGATGATGAAAATTCGGAATTTTATGATGATGAAAATTCGGAATCACGTCATGTTTTTTTGTGGTGTGATCCTGACCAATCGATAAACTTCCACAAAGCAACGGACAATCAAAACACCAATTACAGGCCAAAGGTGTCATTTGAATTCTCTGTTGCCAACTTTGAAGAGAAGCTCGTTGATTGTGTGATTGAAGCATGTGGAGTCTTCCCAATATATGCCTCGAAATATCACGACTTCATTCAACAAATGGGACGGGAGCCAAACTTGGGTACCCAAAAAGAGTCCTGTCATTATGCTGATGAGAATTCATTTCATGAAATGCTCCAATATGTTAGATTCTCATTGAAGCAAGGAGAATGTGGCAATTTTGAAGGAAGTACTATTCCAGAGTGGTTTACTTACAAAAGTTCAATGACAGAGTACGGAGTTTTGCGTGTGAGTGTTCAGGTTGCTCCAGATTTTGAAAACTTAATAGGTTTCATTTTCTGCTTTGTCATGCCTCATTTCTCCTCAAAAGAAAGGGATCAATGTCACTCATCATGTGAATGCAACTGGCATGACGCGGAAAATTCTCTCTTCTTTTTGCAAGGTCCAACAGGGTGGCACTATTCAATGGAAAAATTGAATTCATATGATAATGTGTTTCTATGGTATGATCCCCTCTATTGTGAACACCTACTACACAAACTGCGAACAGAGGGAAAAGGTTATAATGAGGAGCTTGAATTTAAATTTGAGTTTGGTGATGGCGAGATCCATGAATGGGGGCTTTATAGTCGTGATTGCTTGATCAAAGAATGTGGAGTACGGCCTATATATGTCTCAGAGTATACAAACTTCCTGCAACAAAAGAAAGTGGAGGTAAGTATGCCAAAAAAGAGGCATCGGAATATTGATGATGACCAAAATCGACTCCCTTCAACAAAGAAATTGAAGGACTCTTATATAGATGTTATTCAATCTATTCCCCTGAATTCTGAGTCCAAGATATCTCATTATGCTGATGAGTTGCTACTTATGCTGTCCCAATTGAATTTGGAATCTACAGAGAAACACACTCATCACAAATAA 4371 0.3985 MFAIASPSSSSSSKKYDVFLSFRGEDTRRSFTSHLHDALCRGDIKTYIDYELPKGDDISQSLIEAIQDSSISVVVFSQNYATSKWCLNELLEILRCKQHQAQIVVPIFYKIDPSHVRKQNGAYEKAFTEHLEKNSEKAKEWKQALVKIANLAGWDSCNYRDEAELIQNIVTDINKKLNRGSPTTVLENIVGIDENLDQIESLLEEFSTIGIWGMGGMGKTTMAKVVFAKLRSQFDSCCFLENFREESEKHGSKYVRDKLFSALLKDTSLGRLSHRKVLIVLDDVSNTQKLDDLEREAPHLGPGSKVIITSRDKQVLNGRVERIHEAKALSYNNSLELFNHKAFRKHGFKGEYKELVERALAYAQGVPLALTILGSFLYSRTVQQWESALRKLERKADKDIQAVLELSYDGLDDEAKDIFLDIAFFFKGEWGEYVKATLEGSGFHASIGLGILVDKALISFRYGVVWMHDLIQSMAFEIVRKECKNPGGRSRLWNSDEIIDVLKNNQGSDAIQGISLSLSQIKELQLSADSFGKITNLRVLKIYSFTHRRSCVVNLPSGLESFPNSLRYLQWDNFPLKSLPLSICAEKLVELRMPGSCLQKLWDGKQDLVNLRHVNLMESEKLIELPDLSAAKTLKYIELGYCESLCHLHPSILSLPRLKYVDLAHCKNLKSLKTESQSKSLLRLNVARCSGLKEFSFSSDKLTFLCLHTSPVENIDFSMGHMENLWRLSLNGLKLKNLPINDICCMRSLKQLALDYCTGVIDKSKLHSLFDALRYLESLSLRGSCTLTELPDNIKHLSRLQSLDVSYCRDLQSLPELPPSIEELHANSCTSLKTLQFTSHIESPSLADEIMLGSNPRSSVSYLQNLRELSLGGCEQLYELPESIGSLSSLSSLDLSGCEQLYELPESIGSLSSLSSLDLSGSTVASLPASIKYLSNLKDIRLTNCTRLRSLPELLPSTETVFACGCISLEIVPISIPFAPQLKLLLLRDCLKLENCSLSHVTESTYFLMKRLVYTNRGGAVCYPGIKVPKWFGSNERTEASNCITIESPSATNDLIGFIFCCILSRHSYNDDVRCQIYFDGKRCVSSKFGLYADEHLQCYDDENSEFYDDENSESRHVFLWCDPDQSINFHKATDNQNTNYRPKVSFEFSVANFEEKLVDCVIEACGVFPIYASKYHDFIQQMGREPNLGTQKESCHYADENSFHEMLQYVRFSLKQGECGNFEGSTIPEWFTYKSSMTEYGVLRVSVQVAPDFENLIGFIFCFVMPHFSSKERDQCHSSCECNWHDAENSLFFLQGPTGWHYSMEKLNSYDNVFLWYDPLYCEHLLHKLRTEGKGYNEELEFKFEFGDGEIHEWGLYSRDCLIKECGVRPIYVSEYTNFLQQKKVEVSMPKKRHRNIDDDQNRLPSTKKLKDSYIDVIQSIPLNSESKISHYADELLLMLSQLNLESTEKHTHHK 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5575g00009 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 422 IPR027417 -
Pral5575g00009 1456 SUPERFAMILY "Winged helix" DNA-binding domain 399 503 IPR036390 -
Pral5575g00009 1456 PRINTS Disease resistance protein signature 208 223 - -
Pral5575g00009 1456 PRINTS Disease resistance protein signature 363 377 - -
Pral5575g00009 1456 PRINTS Disease resistance protein signature 271 285 - -
Pral5575g00009 1456 PRINTS Disease resistance protein signature 885 901 - -
Pral5575g00009 1456 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Pral5575g00009 1456 Pfam Leucine Rich Repeat 587 606 IPR011713 -
Pral5575g00009 1456 Gene3D Ribonuclease Inhibitor 497 705 IPR032675 -
Pral5575g00009 1456 Gene3D Ribonuclease Inhibitor 706 1016 IPR032675 -
Pral5575g00009 1456 Gene3D - 178 322 IPR027417 -
Pral5575g00009 1456 Coils Coil 382 402 - -
Pral5575g00009 1456 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral5575g00009 1456 SMART till_3 15 151 IPR000157 GO:0007165
Pral5575g00009 1456 Pfam NB-ARC domain 202 409 IPR002182 GO:0043531
Pral5575g00009 1456 Pfam TIR domain 15 187 IPR000157 GO:0007165
Pral5575g00009 1456 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 179 - -
Pral5575g00009 1456 SUPERFAMILY L domain-like 766 999 - -
Pral5575g00009 1456 SUPERFAMILY L domain-like 515 855 - -
Pral5575g00009 1456 Pfam C-JID domain 1024 1174 IPR045344 -
Pral5575g00009 1456 Pfam C-JID domain 1223 1376 IPR045344 -
Pral5575g00009 1456 Gene3D - 328 412 IPR042197 -
Pral5575g00009 1456 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 695 IPR044974 GO:0006952
Pral5575g00009 1456 Gene3D - 9 177 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5575g00009 Pral-Chr5575 135155 140422 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5575g00009 779 947 WRKY Transcription Factor Family AT4G12020 30.769 1.23e-11 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5575g00009 - - pcin:129289344 1248.8