Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5575g00008 ATGTTTCCCATAGCTTACCCATCATCATCTTCTTCTTCTAGGAAATATGATGTGTTTCTAAGTTTCAGAGGAGAGGACACTTGCAGAACCTTCACTAGCCATCTCCATACTGCCTTATGCCTCAGAGATATTCAGACATACATTGATTATAAGCTCCTAAAAGGCGATGACATCTCCCAGTCACTCATTGAAGCAATTCAGGATTCATCCATTTCTATGGTGGTCTTCTCTCAAAACTATGCCACTTTTAAATGGTGTTTGAATGAGCTCCTTCAGATCCTTTGCTGCAAACAACAGCAAGCACAAATTTTTGTTCCTATCTTCTACGAAATTGACCCATCTCATGTGCGCAAACAAAGGGGAGCTTATGAGCAAGCATTCGCAGAACATTTGGAGAAAAACCCAAAGAAGGCGGGGGAGTGGAGACAAGCACTTTTTGAGATTGCAAATTTAGCAGGATTATATTGGACTCCCGCAACTGTAGGTCACTCTTCATTCTCTAACTCCAAGGATGATGCAGAACTCATTCAAAATATTATCAATGACGTCATCAACAAACTGAACCATGAGTACTCAGGGAGTCTATTAGAAAATATTGTTGGAATTAATGAGAATTTGGATCATATTGAGTCATTGCTAGAAGAATCCTCAACAATTGGGATTTGGGAGATAGGCGGGATAGGCAAAACAACAATGGCTAAGGTTGTGTTTGCCAAGCTCCGCTCTCAATTTGATAGCTGCTGCTTCTTAGAAAATTTTAGGGAAGAGTCAGAAAGGCATGGGTTAAAATATGTACGTGACGAATTTTTCCGAGAGCTATTAAAGGATACATCTCTTGGAAGGCTCAATCGTAGAAAAGTTTTGATTGTACCTGGTGATGTTAGCAACACAAAGCAGTTAGATTATTTGGAAAGTGAAGCTCCTCCTCTGAGACCTGGCAGTAAAGTCATCATAACAAGGAGAGATAAAAACGTACTTGAGGGAAGAGTTGATAAAATACACAAGGCCGAGGCACTGGGCTATGACAATGGGCTTAAGCTTTTCAACCTCAAAGCCTTCCGCAAATTTGGTTGTAGAAGTGAATATAAAGACCTCGTTAAAAGAGCAGTTGCTTATGCTGGAGGAAATCCGTTAGCCTTAACCATTTTGGGTTCATTTCTACATGCCAAAACCGCAGAGGAATGGGAAAGTCCATTGAGAAAATTAGAAAACACGATCCATCAAGATATTCAAGCTGTGTTAAAATTGAGCTATGATGGACTTGATTATGAAGAGAGATATTTTTACACGTTGCTTTCTTTTTGA 1305 0.3977 MFPIAYPSSSSSSRKYDVFLSFRGEDTCRTFTSHLHTALCLRDIQTYIDYKLLKGDDISQSLIEAIQDSSISMVVFSQNYATFKWCLNELLQILCCKQQQAQIFVPIFYEIDPSHVRKQRGAYEQAFAEHLEKNPKKAGEWRQALFEIANLAGLYWTPATVGHSSFSNSKDDAELIQNIINDVINKLNHEYSGSLLENIVGINENLDHIESLLEESSTIGIWEIGGIGKTTMAKVVFAKLRSQFDSCCFLENFREESERHGLKYVRDEFFRELLKDTSLGRLNRRKVLIVPGDVSNTKQLDYLESEAPPLRPGSKVIITRRDKNVLEGRVDKIHKAEALGYDNGLKLFNLKAFRKFGCRSEYKDLVKRAVAYAGGNPLALTILGSFLHAKTAEEWESPLRKLENTIHQDIQAVLKLSYDGLDYEERYFYTLLSF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5575g00008 434 Gene3D - 339 422 IPR042197 -
Pral5575g00008 434 ProSiteProfiles TIR domain profile. 14 187 IPR000157 GO:0007165
Pral5575g00008 434 SMART till_3 15 151 IPR000157 GO:0007165
Pral5575g00008 434 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 189 - -
Pral5575g00008 434 Pfam TIR domain 15 194 IPR000157 GO:0007165
Pral5575g00008 434 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 153 IPR035897 -
Pral5575g00008 434 Gene3D - 9 193 IPR035897 -
Pral5575g00008 434 Gene3D - 194 334 IPR027417 -
Pral5575g00008 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 430 IPR027417 -
Pral5575g00008 434 Pfam NB-ARC domain 215 417 IPR002182 GO:0043531
Pral5575g00008 434 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 428 IPR044974 GO:0006952
Pral5575g00008 434 PRINTS Disease resistance protein signature 281 295 - -
Pral5575g00008 434 PRINTS Disease resistance protein signature 373 387 - -
Pral5575g00008 434 PRINTS Disease resistance protein signature 218 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5575g00008 Pral-Chr5575 126732 128660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5575g00008 11 429 WRKY Transcription Factor Family AT4G12020 27.169 5.92e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5575g00008 - - pcin:129287787 492.271