Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5575g00004 ATGGTTTCTGCTTCCTCAAGCTCTGGCTCTAGGCTGAATGCTCCAAGAAAGTATGATGTGTTTGTAAGTTTTAGAGGCGAAACCCGCAACAACTTCACCAGCCATCTTCATGCTGCCCTCAACCGAGACTTTGTTTTGTCCTTTCGTGACGATAAGCAGATAGAGAAAGGTGATGAAATCACGCCATCACTCATCCACACAATCAAGGATTCCAGTGTATCTATCATAGTCTTCTCAAAAGACTACGCTTCCTCAAGATGGTGCCTGGATGAACTCGCCCAAATCATGCGGTGCAGAAAGGATGAGGGCCAGTTTGTTTTACCCATCTTCTACAAAGTTGACCCCTCACATATTCGAAATCAGACTGGAGCTCATGAGAAGGCATTTGAACAACATGAGAAAGATTTCATGCATGATCCAGAAAGAGTGAACAGGTGGAAAGCAGCTCTTTCTAAAGCTGGCTCTTTAAGCGGCAGGCACTGCCAAGACTTCACGGATGAATCCAATTTAATTCAAGAAATTGTCACTGATGTCAACACAAAACTGGAACAAATACATAATTGTCGACAAACATTAAAAGATGTGATTGGAATGGATGAAATGATCAAACCCATTGAAGAGTTACTGGGAAAATCTCACAGAGTTGGAATTTGGGGGATGGGCGGTGTGGGTAAGACCACAATGGCAAATGCTATATTTGCCAAATTATCTTCTCAGTATGACTCTTGCTGCTTCTTGGAAAACATTAGGGAAAAAACAGAAAAAAATGGATTGGAAAGTGTTTGTAGCTATCTTGTCTCGGAGCTGCTAGGGCAAGATATGTCACGTAACCCATCAAATGGTTTAAGAAATGCCTTTGTTGCCAGAAGGCTTGGTAAGAAAATAGCTTTAGTTGTGCTTGATGATGTTGATCGTTCTGACCAATTAGAGGGTTTGCAGGATAACATATGCAATTTCTTAGGAGAAGGTAGTAAAGTTATTACAACAACAAGAAATAGGAAATTGCTTCGAGGAGAAGGTTATGAAATACATGAGGCCAAGGGACTGAGTTATCAAAATTCGCGTCAACTTTTCATCCGCAAGGCCTTTGGATCAGACCATCCAAGACACGAATATGAACAGCTCATAGAAGGATTTATACGTTATACCCGACACAATCCCTTGGCTTTAAAAGTTTTGGGTTCATATGTTCACTGTGAAAATAAAAGTTTATGGGATGGTTTGTTGAGAAAACTACAAGGAGGGTCTCCAAATGACAAAATTCAAGAGGTGTTAAGATTGAGTTATGATAAGTTAGCTGATGAAGAGAAGAAAATTTTTCTAGACATTGCATGTTTTTTAAAAGGTGAAAGTGAAGGATTTGTAGAAGAGCTATTAGAGAGCTATGGATTCCATCCAACTGTTGGCATACCAATCCTTATGGATAAGGCTTTAATAGTCAAGAACAATGGGAAGGTTGAGATGCATGACTTAATACAGGAAATGGGTCTGCAAATTGTTCGTGAAGAGAATGTCAATGAACCTGGAAAGAGGAGTAGATTATGGGATCCCCATGAAATATATGATGTATTGAAAAACTGTGAGGGAGAAAAAGAGGTTGAAGGTATAATGTTCAATATGAATGAGATCAATAGAACTTTGGATTTGACTGCGAAGACCTTTAATAAAATGTCGAGAATAAAATTTCTCAAATTTAATCATCTTGATCAGTTTGAGCCCTTTTCCTGGTCTAGCCCAGCAGGTCTTGAGTCAATTTCTGCCAAAATAAGGTACTTCCACTGGGTTGGATACCCGTGGTCGTCCTTGCCAAAAAAATTTTGTGCCGAGCTCCTTCTTGAACTTAACTTGGAAGACAGCTGCGTTGCAACACTTTGGGACGGAGTACAGGATTTAGCGAATTTAAGAAGAGTAAAACTTCGTGGTTGTTTTATGCTGATGAAGTTACCCGATTTTTCCAAGGCTCATCGTCTTGAAAGCGTAGATCTAAGATCTTGTTGGTGTTTGCCTCAAGTGCATCCATCTCTCCTATCCCTGCACAGTCTCATTTATTTGGATGTAAGCGACTGCCATAGACTTGAGAGTCTCCAAAGTACGGTTCATCTAAAATCTCTCAAAGAAGTCAATATAAGTAGCTGCCTCTGTCTTAAGGAGTTTTCAATGTCATCATCAGAGCTAACATCCTTAGATTTAAGTGGAACTGGGATAGAAGAATTGAGCCCATCAATTGGGCGTTGTTCAAAGCTCAGAAGACTCAATCTCGGTCATACAAAATTGAAGAATATAGAGTTAAGTTGCCTTACATCTCTGGAGGTACTCCGTGTTTCCGGGCAGATGATTGGCAATGTCGACCTACGTGTGCTATTTGATGGCTTACGCAGTCTCCAATCACTAACTCTCAAGGAGTGCCACAAATTAACTGAACTCCCAGATAACATCAGACACCTCTTGAGTCTGCAAGAGCTTCATTTAACTGGTTGTTGGAATCTTCAATATTTGCCAGAGCTTCCCCGCTCCCTTAAATTAATAGATGCCACTGATTGCACAGCACTCTCGTTCGACCTTTCCTTTGTTCATCACCTTAGCAATCTCAATTGTCTCCGGCTCAATGCTTCAAGTCTTTGGCATCTTCCACGGACCCTGCTTTGTTATTTTAAACTCGTGGAGCTTCGTATTCAAAATTTCAGGCAGAGAGAGGGAGACGCGGAGCTGGCAGTTCTATTTTATGCATTGCCATCTTTAGAAGTGCTGTCTTTGCAGAAGTGGCCCCACCTAATTGAACTCCCCGACAATATTCGGCATCTTTCTGAGCTACAATACCTCTCTATAGAAGGCTGCAGCAGGCTGCGGGGTTTACCGAAACTTCCTGCATCCCTTAGGAAGTTGATTGCCACGGACTGCAAATCGCCGGAGACGGTGTCTGCTTCAACGATTTCAAGCACATCTGAGAATTATGGTGAAAAGTTATTTTCATTCATCAACTGTGTGAACTTAGATCTGGGCGCCATTGAAGAACAGGCCATGTTGTTGTTAGAGAAAGCAGTTCACGAGAAGAATGTTGTTACAGTTTGTTACCCGGGGAGGAAGGTTCCGAAGTGGTTTGGGAATAATAGGACCCAAAATGATTCGCGCATCGTCGAACTACCTCCAGCTTCTCATAATTTAGCGGGTTTTGTTTTTTGCGTCGTCGTTCCTGATGTCTCCCTACCGGACGTTGAACTTTTCTTCGGCTTTAAATTGGATGAAATGACGAAAATGACTGAATTTCAACTACTTCCACCGGGCAAGTATTTCAGTCCTGGAAATGTTTCGCTGGTTTCCAATCCAGAGCTATCAGAATTGATACTCGAGAAAATTGAAGGGAACAAAAGAAATCATGAAACCACCACTTATGACCAAAATCTTTTGTTCCAATTCCGTCTTGCATGTGTTGGTAATTTAATTCCCATGGAAGAGTGTGGAGTCTACCCCATATATGCCTCAGAATATTACAATGTTGATCAACAAGGGAAATCGGCGGAGTTCAACTTGAATTCCCGAAAACTCAAGGCCATAATGATTGAATAG 3564 0.4136 MVSASSSSGSRLNAPRKYDVFVSFRGETRNNFTSHLHAALNRDFVLSFRDDKQIEKGDEITPSLIHTIKDSSVSIIVFSKDYASSRWCLDELAQIMRCRKDEGQFVLPIFYKVDPSHIRNQTGAHEKAFEQHEKDFMHDPERVNRWKAALSKAGSLSGRHCQDFTDESNLIQEIVTDVNTKLEQIHNCRQTLKDVIGMDEMIKPIEELLGKSHRVGIWGMGGVGKTTMANAIFAKLSSQYDSCCFLENIREKTEKNGLESVCSYLVSELLGQDMSRNPSNGLRNAFVARRLGKKIALVVLDDVDRSDQLEGLQDNICNFLGEGSKVITTTRNRKLLRGEGYEIHEAKGLSYQNSRQLFIRKAFGSDHPRHEYEQLIEGFIRYTRHNPLALKVLGSYVHCENKSLWDGLLRKLQGGSPNDKIQEVLRLSYDKLADEEKKIFLDIACFLKGESEGFVEELLESYGFHPTVGIPILMDKALIVKNNGKVEMHDLIQEMGLQIVREENVNEPGKRSRLWDPHEIYDVLKNCEGEKEVEGIMFNMNEINRTLDLTAKTFNKMSRIKFLKFNHLDQFEPFSWSSPAGLESISAKIRYFHWVGYPWSSLPKKFCAELLLELNLEDSCVATLWDGVQDLANLRRVKLRGCFMLMKLPDFSKAHRLESVDLRSCWCLPQVHPSLLSLHSLIYLDVSDCHRLESLQSTVHLKSLKEVNISSCLCLKEFSMSSSELTSLDLSGTGIEELSPSIGRCSKLRRLNLGHTKLKNIELSCLTSLEVLRVSGQMIGNVDLRVLFDGLRSLQSLTLKECHKLTELPDNIRHLLSLQELHLTGCWNLQYLPELPRSLKLIDATDCTALSFDLSFVHHLSNLNCLRLNASSLWHLPRTLLCYFKLVELRIQNFRQREGDAELAVLFYALPSLEVLSLQKWPHLIELPDNIRHLSELQYLSIEGCSRLRGLPKLPASLRKLIATDCKSPETVSASTISSTSENYGEKLFSFINCVNLDLGAIEEQAMLLLEKAVHEKNVVTVCYPGRKVPKWFGNNRTQNDSRIVELPPASHNLAGFVFCVVVPDVSLPDVELFFGFKLDEMTKMTEFQLLPPGKYFSPGNVSLVSNPELSELILEKIEGNKRNHETTTYDQNLLFQFRLACVGNLIPMEECGVYPIYASEYYNVDQQGKSAEFNLNSRKLKAIMIE 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5575g00004 1187 Gene3D - 348 433 IPR042197 -
Pral5575g00004 1187 Pfam NB-ARC domain 213 429 IPR002182 GO:0043531
Pral5575g00004 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 443 IPR027417 -
Pral5575g00004 1187 Gene3D - 15 184 IPR035897 -
Pral5575g00004 1187 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 719 IPR044974 GO:0006952
Pral5575g00004 1187 Gene3D Ribonuclease Inhibitor 721 834 IPR032675 -
Pral5575g00004 1187 Gene3D Ribonuclease Inhibitor 536 720 IPR032675 -
Pral5575g00004 1187 Gene3D Ribonuclease Inhibitor 837 975 IPR032675 -
Pral5575g00004 1187 Gene3D - 185 342 IPR027417 -
Pral5575g00004 1187 SMART till_3 17 156 IPR000157 GO:0007165
Pral5575g00004 1187 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral5575g00004 1187 Pfam TIR domain 17 190 IPR000157 GO:0007165
Pral5575g00004 1187 SUPERFAMILY RNI-like 763 983 - -
Pral5575g00004 1187 Pfam C-JID domain 1024 1161 IPR045344 -
Pral5575g00004 1187 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral5575g00004 1187 Pfam Leucine rich repeat 724 776 IPR001611 GO:0005515
Pral5575g00004 1187 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Pral5575g00004 1187 PRINTS Disease resistance protein signature 676 692 - -
Pral5575g00004 1187 PRINTS Disease resistance protein signature 214 229 - -
Pral5575g00004 1187 PRINTS Disease resistance protein signature 290 304 - -
Pral5575g00004 1187 PRINTS Disease resistance protein signature 383 397 - -
Pral5575g00004 1187 SUPERFAMILY L domain-like 488 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5575g00004 Pral-Chr5575 36503 40727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5575g00004 11 821 WRKY Transcription Factor Family AT4G12020 31.851 1.88e-93 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5575g00004 - - pcin:129288608 1008.44