Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5575g00003 ATGTTTCCCATAGCTTCCCCATCATCTTCTTCTTCTTCCAAGAAATATGATGTGTTTCTGAGTTTCAGAGGAGAGGACACTCGCAGATCCTTTACCAGCCATCTCCATACTGCCTTGTGCCTCAGAGATATTGAGACATACATTGATTATAAGCTCCCAAAAGGCGATGACATCTCCCAATCACTCATTGAAGCAATTCATGATTCATTCATCTCTGTGGTGGTCTTCTCTCAAAACTATGCCACTTCAAAATGGTGTTTGAATGAGCTCCTTGAGATCCTTTGCTGCAAACAACATCAGGAACAAATTGTTGTTCCTATCTTCTACGAAATCGACCCATCTGATGTACGCAAACAAAAGGGAGCTTATGAGAAAGCATTCGCAGAACATTTGGAGAAAAACTCAGAGAAGGTGGAGAAGTGGAGACAAGCACTTTTTGAGATTGCAAATCTAGCAGGATGGGACTCCTGCAACTACAGGGATGAAGCAAAACTCATTCAAAATATTGTCAATGACATCATCAACAAACTGAACCATAGGTACTCAGGAAGTGTATTAGAAAATATCGTTGGAATTGATGAGAATTTGGATCATATTGAGCAATTGCTCGAAGAATCCTCGACAATTGGGATTTGGGGGATGGGCGGGATAGGCAAGACAACAATGGCTAAGGTTGTGTTTGCCAAGCTCCGCTCTCAATTTGATAGTTGCTGCTTCTTAGAAAATTTTAGGGAAGAGTCAAAAAGGCATGGGTTAAAATATGTACGTGATGAACTTTTCCGACAATTATCAAAGGATACATCTATTAGGAGGCTCAATCGTAGAAGAGTTTTGATTGTACTTGATGATGTTAGCAACACAAAGCAGTTAGATGAGTTGAAAAGTGAAGCTCCTCCTTTGGGTCCTGGCAGTAAAGTCATCATAACAAGTCGAGATAAGCATGTGCTTATTGTTGGAAGAGTTGATAAAATACATGAGGCCAAGGCATTGAGCAACAACAATTCACTTGAGCTTTTCAAGCTCAAAGCCTTCCACAAAGATGGTTATGAAAGTGAATATGAACAACCAGTTAAAAGAGCACTTGCTTATGCCAAAGGCATCCCATTGGCCTTAACCGTTTTGGGTTCGTTTCTACATTCCAGACCTGCAGATCAATGGGAAGATGCGTTGAGTAAATTAGAAAGTATGGCCCATGAAGATATTCAAAATGTGTTAAAATTGAGCTATGATGGACTCGATGACGAAGTGAGGGAGATATTTTTAGACATTGCTTGTTTTTTTAAAGGTAGATCTGGACAATATGTAGAAGCAATGCTAAAGAGCTTTGGCTTTCACGCAAGCATTGGTTTGGGAATTCTTGTGGATAGGGCGTTGATAAGTCTTAGTCATAATGCGGTATGGATGCATGATTTAATTCAATCAATGGCTTTCGAAATTGTTCGCAAAGAGTGTAACAATCCTGGAGGGCGTAGTCGACTATGGAATTCCGATGAGATCTTCGACGTTCTAAAACATAATCTAGGAAGTGATGCAATTCAAGGCATAAGTTTAGATTTGTCTCAAATAAAGGAATTACAGTTCAGTGCTGATGCCTTTGGAAAGATGACAAATTTAAGGTTTTTGGAAGTCTATTCATCTAAGAGGTCGTGTATTGTGAATCTTCCTCCAATGCTTGAATCATTTCCTAATTTATTACGGTATCTTCGATGGGACAATTTTCCTTTAAAGTCCTTACCGTTGTCATTCTGTGCCGAGAAGCTAGTTGAACTTCGCATGCCTCGTAGCCGCCTTCAAAAACTATGGGATGGCAAGCAGGACTTGGTGAATTTAAGGAATATAGACCTTTGGGGATCTAGAAAATTGATGGAGTTGCCAGATTTGTCCACCGCTGAAACACTTGAACAGCTAAATCTTGAATGGTGTGATAGTTTATGCCATCTTCATCCATATATTTTATCTCTTCCGAGATTGAAGGATGTGAATCTTGGGAGTTGCAAAAACTTAAAGAGTTTGAAAGCAGAGAGTCAATCAAAATCGCTCTCAATACTACGTCTTTATCATTGCTCTAGTCTCAAGGAATTTTCATTCTCTTCGGACAAACTAATTTCTTTAGGGTTAGTTCTCTTAAAAGTCGAGAATATAGACTTTTTAGGTGGGCATATGGAGGAACTTCAGTGTCTCTCTCTTGATGGTTCCGAACTAAAGAATCTTCCGATTAATGACATTTGTTGCATGAGATCTCTTTTGGGGCTTCATCTTAATTATTGCACGGGAGTGATTGACAAATCAAAGCTCCATAGCTTATTTGATGCTTTGCGATATCTCGTATCACTTTCTTTGAGAGGGTCATGCACATTAACGGAACTTCCAGACAATATCAAGCATCTCTCGAGGCTACAGTCTCTTGATGTAAGCTATTGCAGGGACCTTCAATCTTTACCAGAACTTCCTCCATCCATTGACGAATTACATGCCTACGGCTGCACATCATTAAAGACGCTACAATTCACTTCTCATATTGAATCTCCATCATTGGCAGATGAAATAATGTTGGGTTCAACCCTCCATTCCTCAGTTAGCTCCTCAGTTAGTTATCTCCAAAACCTTCGAAAGCTTAGTCTTGGTGGTTGTGAACAGGTGTATGAATTGCTTGAAAACATCGGCTCCTTATCTTCATTATCTTCACTGGATTTGAGTGGAAGTATTGTAGCGAGCTTGCCTGCTAGTATCAAGTATCTCTCAAATCTAAAAGAAATACGCTTGACCAATTGTACAAGACTTCGTTCTCTGCCAGAACTGCCGCCATCCACAGAAACCGTCTTCGCTAGTGGTTGCATATCATTGAAGATTGTACCTATTTCAATGCCTTTTGCACTACAATTGAAGTTGCTACTTCTGAGAGATTGCTTGAAATTGGAGAACTGCTTTCTGTCTCATGTGACGGAAACTACTTATTTCTTATTGAAGCGATTGGTGTACACAAACCAACGCGCTGCTGTCTGTTACCCTGGAATAAAAGTTCCAAAGTGGTTTGGATCTAATGAGAGAACAGAGGCTTCCAACTGTATAACTATTGAGTCTCCTTCAGCCACAAACGACCTAATCGGCTTCATCTTTTGCTGTATTCTTTCTCGGCATTCCTATAAGGATGACGTGCAATGCCAAATTCATTATGATGGTAAGCGGTGCGGATTCTCAAGTTTTGGTCTTTATGCGAATCTACATTCAGAATTTTATGATGATGAAAATTCGGAATCACGTCATGTTTTTTTGTGGTGTGATCCTAACGAATTCATAAACTTCCCCAAAGCAACGAACAACCAAAACACCAATTACAGGCCAAAGGTGTCATTTGAATTCTCTGTTGCCAAATCTACACAGAAGCTCGTTCATTCTGTGATTGAAGCATGTGGAGTCTGCCCAATATATGCCTCGAAATATCACGACTTCATTCAACAAATGGGATGCCAGCCAAACTTAGGTACCCAAAAAGAGTCCTATCATTATGCTGATGAGAATTCATTTCATAAAATGCTCCAATATGTTAGATTCTCATTAAAGCAAGGAGAATGTGGCAATTTTGAAGGAAGTACTATTCCAGAGTGGTTTACTTACAAAAGTTCAATGACAGGGTACAGAGATTTGAGTGTGTGTGTTCAGGTTGCTCCAGATTTTGAAAACTTAATAGGTTTCATTTTCTGCTTTGTCATACCTCACTTCTCCTCAAAAGAAAGGGATCAATGTCACTCATCATGTCGATGCTATTCGTTTACCTCAAGAGGATGGCACTATTCAATGGAAAAATTGAATTCATATGATGATGTGTTTCTATGGTATGATCCCCTCTATTGTGAACACATACTAAAACTGGGAAAAGGTTATAACAAGTGGCTTCGATTTGTCTTTAATCTTTATGATGTTTTGATCAATGGGTTTTATGTTGGTAATTGCTTGATCAAAGAATGTGGAGTTCGGCCGATATATGTCTCAGAGTACACAAACTTCCTCCAACAAAAGAAAGGGGAGGTGAGTATGCCAAAAAAGAGGCATCAGAATATTGATGATGACCAACATCAACTCCCTTCAACAAAGAAATTGAAGGACTCTTAG 4110 0.3942 MFPIASPSSSSSSKKYDVFLSFRGEDTRRSFTSHLHTALCLRDIETYIDYKLPKGDDISQSLIEAIHDSFISVVVFSQNYATSKWCLNELLEILCCKQHQEQIVVPIFYEIDPSDVRKQKGAYEKAFAEHLEKNSEKVEKWRQALFEIANLAGWDSCNYRDEAKLIQNIVNDIINKLNHRYSGSVLENIVGIDENLDHIEQLLEESSTIGIWGMGGIGKTTMAKVVFAKLRSQFDSCCFLENFREESKRHGLKYVRDELFRQLSKDTSIRRLNRRRVLIVLDDVSNTKQLDELKSEAPPLGPGSKVIITSRDKHVLIVGRVDKIHEAKALSNNNSLELFKLKAFHKDGYESEYEQPVKRALAYAKGIPLALTVLGSFLHSRPADQWEDALSKLESMAHEDIQNVLKLSYDGLDDEVREIFLDIACFFKGRSGQYVEAMLKSFGFHASIGLGILVDRALISLSHNAVWMHDLIQSMAFEIVRKECNNPGGRSRLWNSDEIFDVLKHNLGSDAIQGISLDLSQIKELQFSADAFGKMTNLRFLEVYSSKRSCIVNLPPMLESFPNLLRYLRWDNFPLKSLPLSFCAEKLVELRMPRSRLQKLWDGKQDLVNLRNIDLWGSRKLMELPDLSTAETLEQLNLEWCDSLCHLHPYILSLPRLKDVNLGSCKNLKSLKAESQSKSLSILRLYHCSSLKEFSFSSDKLISLGLVLLKVENIDFLGGHMEELQCLSLDGSELKNLPINDICCMRSLLGLHLNYCTGVIDKSKLHSLFDALRYLVSLSLRGSCTLTELPDNIKHLSRLQSLDVSYCRDLQSLPELPPSIDELHAYGCTSLKTLQFTSHIESPSLADEIMLGSTLHSSVSSSVSYLQNLRKLSLGGCEQVYELLENIGSLSSLSSLDLSGSIVASLPASIKYLSNLKEIRLTNCTRLRSLPELPPSTETVFASGCISLKIVPISMPFALQLKLLLLRDCLKLENCFLSHVTETTYFLLKRLVYTNQRAAVCYPGIKVPKWFGSNERTEASNCITIESPSATNDLIGFIFCCILSRHSYKDDVQCQIHYDGKRCGFSSFGLYANLHSEFYDDENSESRHVFLWCDPNEFINFPKATNNQNTNYRPKVSFEFSVAKSTQKLVHSVIEACGVCPIYASKYHDFIQQMGCQPNLGTQKESYHYADENSFHKMLQYVRFSLKQGECGNFEGSTIPEWFTYKSSMTGYRDLSVCVQVAPDFENLIGFIFCFVIPHFSSKERDQCHSSCRCYSFTSRGWHYSMEKLNSYDDVFLWYDPLYCEHILKLGKGYNKWLRFVFNLYDVLINGFYVGNCLIKECGVRPIYVSEYTNFLQQKKGEVSMPKKRHQNIDDDQHQLPSTKKLKDS 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5575g00003 1369 Gene3D Ribonuclease Inhibitor 852 1016 IPR032675 -
Pral5575g00003 1369 Gene3D Ribonuclease Inhibitor 712 851 IPR032675 -
Pral5575g00003 1369 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 695 IPR044974 GO:0006952
Pral5575g00003 1369 FunFam Disease resistance protein RPS4 509 699 - -
Pral5575g00003 1369 Pfam TIR domain 15 182 IPR000157 GO:0007165
Pral5575g00003 1369 Pfam Leucine Rich Repeat 586 605 IPR011713 -
Pral5575g00003 1369 SUPERFAMILY L domain-like 765 978 - -
Pral5575g00003 1369 Pfam C-JID domain 1003 1145 IPR045344 -
Pral5575g00003 1369 Pfam C-JID domain 1194 1331 IPR045344 -
Pral5575g00003 1369 SMART till_3 15 151 IPR000157 GO:0007165
Pral5575g00003 1369 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Pral5575g00003 1369 PRINTS Disease resistance protein signature 208 223 - -
Pral5575g00003 1369 PRINTS Disease resistance protein signature 364 378 - -
Pral5575g00003 1369 PRINTS Disease resistance protein signature 794 810 - -
Pral5575g00003 1369 PRINTS Disease resistance protein signature 271 285 - -
Pral5575g00003 1369 Gene3D - 9 179 IPR035897 -
Pral5575g00003 1369 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral5575g00003 1369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 423 IPR027417 -
Pral5575g00003 1369 Gene3D - 329 413 IPR042197 -
Pral5575g00003 1369 Gene3D Ribonuclease Inhibitor 496 711 IPR032675 -
Pral5575g00003 1369 MobiDBLite consensus disorder prediction 1344 1369 - -
Pral5575g00003 1369 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 179 - -
Pral5575g00003 1369 Gene3D - 180 322 IPR027417 -
Pral5575g00003 1369 Pfam NB-ARC domain 200 410 IPR002182 GO:0043531
Pral5575g00003 1369 SUPERFAMILY L domain-like 468 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5575g00003 Pral-Chr5575 15153 20110 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5575g00003 773 926 WRKY Transcription Factor Family AT4G12020 29.032 1.41e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5575g00003 - - pcin:129289344 1171.76