Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5574g00003 ATGAACTGCACCCTGAAAAAAACTACGGTGGTTTCTGCTTCCTCAAGATCTGGCTCTAGGCCAAATGCTCCGAGAAAGTATGATGTATTTGTAAGTTTTAGAGGCGATACCCGCAACAACATCACCAGCCATCTTCATGCTGCTCTCAAACGAGAATTCATTTTGTCCTTTCGTGACGATAAGCAAATAGAGAAAGGTAATGAAATCACACCATCGCTGATCCAAGCAATCAAGGATTCCAGCGTATCTATAATAGTCTTCTCAAAAGACTATGCTTCCTCAAGATGGTGCCTGGATGAACTCGCCCAAATCATGCAGTGCAGAAAGGATGAGGGCCAGTTTGTTATCCCCATCTTCTACAAAGTTGACCCCTCACATGTTCGAAAGCAGACCGGAGTTTATGAGAAGGCATTTGAACAACATGAGAAAGATTTCATGAATAACCCAGAAAGGGTGAATAGATGGAAAGCAGCTCTTTCTGAAGCTGGCTATTTAAGCGGCAGGCACTACCATGACTTCACGGATGAATCCAATTTAATTCAAGAAATTATCACTGATATTAGCACGAAACTAGAACAAATACATAATCGTGGACAAACATTAAAAGATGTGGTTGGAATGGATGAAATGATCGAACCCATTGAAGAGTTACTAGGAAAATTTCAAAGAGTTGGAATTTGGGGGATGGGCGGTGTAGGGAAGACCACAATGGCAAATGCTGTATTTGCCAAATTATCTTCTCGGTATGACAATTGCTGCTTCTTGGAAAATATTAGGGGAAAAACAGAAAAACTTGGATTGGAAAGTGTTTGTAGCTCTCTTGTCTCGGAGCTGCTAGGGCAAGATATGCCAAGTAACACGTCAAATGTTTTAAGAAATGCCTTTGTTGCCAGAAGGCTCGGTAGGCAAAAAGCTATGGTTGTGCTTGATGATATTGATAGTTTTGACCAATTTGAGGGTTTGCAGGAAAACATATGTAATTTCTTAGGAGAAGGCAGTAAAGTTATTATAACAACAAGAAATAGGAAATTGCTTCAGGGAAAAGGTTATGAAATACTTGAGGCCAAGGGATTGAGTTATCACAATTCGCGTCAACTTTTCATCCGCAAGGCCTTTGGATCAGACTATCCAGAACACGGATATGAACAGCTCATAGAAGGGTTTGTAGAATATACTCGGCACAATCCCTTGGCTTTAACAGTTCTGGGTTCATATGTTCACTCTGAAGATAAAAGGTTATGGGATGGTGTGTTGACAAAACTACGAGCAAGGAGTCCAAATGACGAAATTCAAAAGGTGTTGAGATTGAGTTATGATGGATTAGCCTATGAAGAGAAGCAAACTTTCCTAGACATTGCATGTTTCTTAAAGGGTGAAAATGAAGCATTTGTAGAAGAGCTATTAAAGAGCTATGAATTCCATCCAACTGTTGGCATGCAAAACCTTAAAGATAAGGCTCTGATTGTCACAACCAATGGAAAAGTTGAGATGCATGACTTAATACAGGAAATGGGCTTACAAATTGTTCGTGAAGAGAATATCAGTGAACCTGGAAAAAGGAGTAGATTATGGGATCCTAGCGAAATCTATGATGTATTGAAAAATTGTGAGGGAGAAAAAGAGGTTGAAGGCATAATATTCAATACAGATGAGATTAATAGACCTTTAGATTTGACTGCTGAGACTTTTAATAAAATGACAAGAATAAGATTTCTTAAAGTTTACTCATCATTAACTCAGATTATGTCAGATGAATTGGGTATTGCAGCAGGTCTTGAGTCAATTTCTACCAAAATAAGGTACTTCCACTGGGCAGGATACCCAGGAAAGTCCTTGCCATCAAATTTTTGTGCTGAGCTTCTTCTTGAACTTAACTTGGAATGGAGCCGGGTTGAAACACTTTGGGAAGGAGTGCAGGATTTAGCTAATTTAAGAAGAGTAAAACTTGAATGTTGTTTTGCGCTGAGGGAGTTACCCGATTTTTCCAAGGCTCGTAGTCTTGAAACCATAGATCTGAGTGGTTGTGCACGTTTGTGTCATGTGCATGCATCTCTCCTATCCCTGCATAGTCTCATTTCTTTGGATGTCAGCGGCTGCCATAGCCTTGAGAGTCTCCAAAGTAGAATTCATCTAAAATCTCTCAAAGAAGTCAATATAACTGGGTGCTATCGTCTTAAGGAGTTCTCGGTGTCATCAGAAGAACTAACATCTTTAGATTTAGATGGAAATGATATAGAAGAATTGAGCCCATCAATTGGGCGTTGTTCAAAGCTTAGAAGACTCAACCTCTGTGATACAAAATTGAAGAATCTAAAGGTATTAAGTTGCTTGACATATCTGGAGGAACTCCGTGTTTCCAGCCAGAAGATTGACAGTGTCGACCTACATGTGCTATTTGATAGCTTATGCAGCCTCCAATCACTGACTCTCGAGATGTGCTGTGACTTAACTGAACTCCCAGATAATATCAGGCAACTCTCGAGTCTGGAAGAGCTTTATTTGGGAGGTTGCAGGAATCTTCAATATTTACCAGAGCTTCCCCCCTCCCTTAAATTATTAGATGCCACTGATTGCACAGCACTCTCGTTCAACCTCTCCTTCGTTCATCACCTTAGAAATCTCAATCGTCTCCTGCTCCATACTTTAAGTCCTTGGTATCCTCCACAGACCATGCTTTGTCGTTTTAAACTCATGTGCCTTGGTATTCAAAAGATGGCAGTTCTATTTGATGCATTGCCATCTTTAGAAGTGTTGTCTTTGAAGGAGTGGCGCGACCTAACTGAACTCCCCCACAATATCACACATCTTTCTGAGCTACGCTATCTATCTGTAGAAGGTTGCACCATGCTTCGGAGTCTACCGGAACTTCCTCCATCCCTTAGAAAGTTGATTGCCACAGACTGCACATCACTGAAGACGGTGTCTGCTTCAACAATTTCAAGCACATCTGAGAATTATGGTGAGAAAATCTTTTCATTCATCAACTGTGTGAACTTAGATCTGGGCGCCATTGAAGAACAAGCCAATTTGTTGTTAGAGAAAGCAGTTCATGAGAAGAATGATGTTACAGTTTGTTACCCAGGGAAGAAGGTTCCGAAGTGGTTTGGGAATCATAGATCCCAAAATGATTCGAGCATCATCGAACTACCTCCAGCTTCTTACAATTTAGCGGGTTTTGTTTTTTGCGCCGTTGTTCCTGACTCCTTCCCACGGGAAGAGCATATGGCCCCTGAAATTTCCTTCGGCTTTACATTGGATGAAATGACTCGCGAAATTGCATTTTCATCGCTCATAAAATTCAGTCCTGGAAATGTTCTCCTACGTTCTAATCCAAAACTATCTGAATTGATAGTCAGGAAGATTGAAGAGAAAAGAAGAAACCATGAAACCACCTCTTATGACCAAAATCTTTTGTTCAAATTCGATTTTGGAATTGGTAGTGATATTCTCATCAAAGAGTGTGGAGTCTATCCCATATATGCCTCAGAATATTACAATGTTGATCAACAGGGGAAATCGGCGGCGTTCAATTTTGAATTCCCGAAAACGCAAGGCCATAATGATTGA 3567 0.4045 MNCTLKKTTVVSASSRSGSRPNAPRKYDVFVSFRGDTRNNITSHLHAALKREFILSFRDDKQIEKGNEITPSLIQAIKDSSVSIIVFSKDYASSRWCLDELAQIMQCRKDEGQFVIPIFYKVDPSHVRKQTGVYEKAFEQHEKDFMNNPERVNRWKAALSEAGYLSGRHYHDFTDESNLIQEIITDISTKLEQIHNRGQTLKDVVGMDEMIEPIEELLGKFQRVGIWGMGGVGKTTMANAVFAKLSSRYDNCCFLENIRGKTEKLGLESVCSSLVSELLGQDMPSNTSNVLRNAFVARRLGRQKAMVVLDDIDSFDQFEGLQENICNFLGEGSKVIITTRNRKLLQGKGYEILEAKGLSYHNSRQLFIRKAFGSDYPEHGYEQLIEGFVEYTRHNPLALTVLGSYVHSEDKRLWDGVLTKLRARSPNDEIQKVLRLSYDGLAYEEKQTFLDIACFLKGENEAFVEELLKSYEFHPTVGMQNLKDKALIVTTNGKVEMHDLIQEMGLQIVREENISEPGKRSRLWDPSEIYDVLKNCEGEKEVEGIIFNTDEINRPLDLTAETFNKMTRIRFLKVYSSLTQIMSDELGIAAGLESISTKIRYFHWAGYPGKSLPSNFCAELLLELNLEWSRVETLWEGVQDLANLRRVKLECCFALRELPDFSKARSLETIDLSGCARLCHVHASLLSLHSLISLDVSGCHSLESLQSRIHLKSLKEVNITGCYRLKEFSVSSEELTSLDLDGNDIEELSPSIGRCSKLRRLNLCDTKLKNLKVLSCLTYLEELRVSSQKIDSVDLHVLFDSLCSLQSLTLEMCCDLTELPDNIRQLSSLEELYLGGCRNLQYLPELPPSLKLLDATDCTALSFNLSFVHHLRNLNRLLLHTLSPWYPPQTMLCRFKLMCLGIQKMAVLFDALPSLEVLSLKEWRDLTELPHNITHLSELRYLSVEGCTMLRSLPELPPSLRKLIATDCTSLKTVSASTISSTSENYGEKIFSFINCVNLDLGAIEEQANLLLEKAVHEKNDVTVCYPGKKVPKWFGNHRSQNDSSIIELPPASYNLAGFVFCAVVPDSFPREEHMAPEISFGFTLDEMTREIAFSSLIKFSPGNVLLRSNPKLSELIVRKIEEKRRNHETTSYDQNLLFKFDFGIGSDILIKECGVYPIYASEYYNVDQQGKSAAFNFEFPKTQGHND 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5574g00003 1188 PRINTS Disease resistance protein signature 299 313 - -
Pral5574g00003 1188 PRINTS Disease resistance protein signature 662 678 - -
Pral5574g00003 1188 PRINTS Disease resistance protein signature 223 238 - -
Pral5574g00003 1188 PRINTS Disease resistance protein signature 392 406 - -
Pral5574g00003 1188 ProSiteProfiles Leucine-rich repeat profile. 734 755 IPR001611 GO:0005515
Pral5574g00003 1188 Gene3D - 24 193 IPR035897 -
Pral5574g00003 1188 Pfam TIR domain 26 206 IPR000157 GO:0007165
Pral5574g00003 1188 Gene3D - 194 351 IPR027417 -
Pral5574g00003 1188 Gene3D - 358 442 IPR042197 -
Pral5574g00003 1188 ProSiteProfiles TIR domain profile. 25 191 IPR000157 GO:0007165
Pral5574g00003 1188 Pfam NB-ARC domain 219 425 IPR002182 GO:0043531
Pral5574g00003 1188 Gene3D Ribonuclease Inhibitor 850 986 IPR032675 -
Pral5574g00003 1188 Gene3D Ribonuclease Inhibitor 553 727 IPR032675 -
Pral5574g00003 1188 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 193 - -
Pral5574g00003 1188 SMART till_3 26 165 IPR000157 GO:0007165
Pral5574g00003 1188 Pfam C-JID domain 1026 1163 IPR045344 -
Pral5574g00003 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 452 IPR027417 -
Pral5574g00003 1188 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 167 IPR035897 -
Pral5574g00003 1188 Gene3D Ribonuclease Inhibitor 728 849 IPR032675 -
Pral5574g00003 1188 SUPERFAMILY L domain-like 848 979 - -
Pral5574g00003 1188 SUPERFAMILY L domain-like 497 880 - -
Pral5574g00003 1188 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 729 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5574g00003 Pral-Chr5574 20093 24116 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5574g00003 20 832 WRKY Transcription Factor Family AT4G12020 31.742 3.88e-90 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5574g00003 - - pcin:129288608 1008.44