Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5574g00002 ATGGCTAAGGTTGTGTTTACCAAGCTCTGCTCTCAATTTGATAGTTGCTGCTTCTTGAAGAATTTTACAGAAAAGTATGAAAAGCATGGGTTAGAATATGTACGTGATGAACTTTTCCGAGAACTATCAAAGGATACATCTCTTGGGAGGCTCGATCGTAGAAGAGTTTTGATTGTACTTGATGATGTTAGCAACACAAAGCAGTTAGATGAGTTGAAAAGTGAAGCTCCTCCTTTGGGACCTAGTAGTAAAGTCATCATAACAAGTAGGGATAAGCATGTGCTTAATGGAAGAGTTGATAAAATACATGAGGCCAAAGCATTGAGCTACAACAATTCACTTGAGCTTTTCAACCTCAAAGCCTTCCACAAAGATGGTTATGAAAGTGAATATGAAGAACTAATTAAAAGAGCACTTGCTTATGCCAAAGGCATCCCATTGGCCTTAACCGTTTTGGGTTCGCTTCTACAGTCCAGACCTGTAGATCAATGGGAAAGTGCGTTGAGAAAATTAGAGAGGTTGGCCATTGAAGGTATTCAAGTTGTGTTAAAATTGAGCTACGATGGACTTGATGACGAAGTGAGGGAGATATTTTTAGACATTGCTTGTTTTTTTAAAGGTAGATCTAGAGAATATGTAGAAGCAATGCTAGACATTTTTGGCTTTCACGCAAGCATTGGTCTGGGAATTGTGGATAAGGCTTTGATAAGTCTTCATCATGGCGTGGTATGGATGCATGATCTAATTCAATCAATGGCTTTTGAAATTGTTCGCAAAGAGTGTAAGAATCCTGGAGGACGCAGTCGATTATGGAACTCTAATGAGATCATCGACGTCCTAAAAGATAATCGAGGAAGTGGTGCAATTCAAGGCATAAGCTTATGTTTGTCTCAAATTAAAGATTTTGAATTGAGTGCTTATGTCTTTAGAGAGGTGGCAAATTTAAGGCTTCTGAAACTCTATTCACCTAACGATAAAGGATCATGCACTGTGAAACTTCCTTCAGGGCTTCAATCATTTCCTAATTCGTAA 1032 0.3857 MAKVVFTKLCSQFDSCCFLKNFTEKYEKHGLEYVRDELFRELSKDTSLGRLDRRRVLIVLDDVSNTKQLDELKSEAPPLGPSSKVIITSRDKHVLNGRVDKIHEAKALSYNNSLELFNLKAFHKDGYESEYEELIKRALAYAKGIPLALTVLGSLLQSRPVDQWESALRKLERLAIEGIQVVLKLSYDGLDDEVREIFLDIACFFKGRSREYVEAMLDIFGFHASIGLGIVDKALISLHHGVVWMHDLIQSMAFEIVRKECKNPGGRSRLWNSNEIIDVLKDNRGSGAIQGISLCLSQIKDFELSAYVFREVANLRLLKLYSPNDKGSCTVKLPSGLQSFPNS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5574g00002 343 Pfam NB-ARC domain 50 189 IPR002182 GO:0043531
Pral5574g00002 343 PRINTS Disease resistance protein signature 142 156 - -
Pral5574g00002 343 PRINTS Disease resistance protein signature 50 64 - -
Pral5574g00002 343 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 338 IPR044974 GO:0006952
Pral5574g00002 343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 201 IPR027417 -
Pral5574g00002 343 Gene3D - 107 191 IPR042197 -
Pral5574g00002 343 Gene3D - 1 103 IPR027417 -
Pral5574g00002 343 SUPERFAMILY "Winged helix" DNA-binding domain 179 281 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5574g00002 Pral-Chr5574 6600 7738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5574g00002 1 342 WRKY Transcription Factor Family AT4G12020 32.869 2.01e-48 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5574g00002 - - pcin:129289671 359.377