Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5573g00011 ATGGCTAAGGTTGTGTTTGCCAAGCTCCGCTCTAAATTTGATAGGTGCTACTTCTTGAAAAATTTCATAGAAAAGTATGAAAAGCATGGATCGGAACATGTACGTGACGAACTCTTTCAAGAACTATCAAAGGATAAATCTCTTGAATGGCTCAGTTGTAGAAAGGTTTTGATTGTGCTTGATGATGTTAGCAACACAAAACAGTTAGATGAGTTGACAAGTGAAGCTCCTCGTTTGGGAACTGGTAGTAAAGTCATCATAACAAGTAGAGATAAGCATGTGCTTAATGGAAGAGTTGAGAAAATACATGAGGCCGAGGCATTGAGCTACAACAATTCACTTGAGCTTTTCAACCTCAAAGCCTTCCACAAAGTTGGTTATGAAAGTGAATATGAAGAACTGGTTGAAAGAGCACTTGCTTATGCCAAAGGCATCCCATTGGCCTTAACTGTTTTGGGTTCGTTTCTACATTCCAGACCTATAAATCAATGGGTAAGTGTGTTGAACAAATTAGAACGGATGGCCAATAAAGATATTCAAGATGTGTTAAAATTGAGTTACGATGGACTTGATCATGAAGTGAAGGAGATATTTTTAGACATTGCTTTTTTTTTTAAAGGTGAATGGGAAAATTATGTAGCAGCAACGCTAGAGGGCTTTGGCTTTCATGCAAGAATTGGTTTGGGAATTCTTGTGGATAAGGCGTTGATAAGTTATAGTCATGGTGCGGTATGGATGCATGATTTAATACAATGGATGGCTTTTGAAATTGTTCGCCAAGAGAATGAGAAAAATCCTGGAGGACGTAGTCGACTACGGAATCCTGATGAGATCCGTGATGTGCTAGAAAATAATCGGGGAAGTGGTGCAATTCAAGGCATAAGTTTAGATTTGTCTCAAATTAAATATTTAAAATTGAGTGCTGATGTCTTTAGAAAGATGACAAATTTAAGGTATCTTCGGTGGGACAATTTTCCTTTAGAGTCTTTCCCATTGTCATTTTGTGCCGAGAAGCTAGTTGAACTTCACATGCCTCATAGCTACCTTCGAAAACTATGGGATGGCAAGCAGGAGTTGGTGAATTTAAGGAATATAAACCTTGAGAGATCCAAAAAATTGATAGAGTTGCCAGATTTGTCAACCGCTGAAAGACTTGAAAGGGTTACTCTTTTCGCGTGTGAAAGTTTATGCCATCTTCATCCATCCATTTTATCTCTTCCGAGATTAGAGTTTGTGGATCTTGGGATGTGCAAAAACCTGAAGAGTTTGGGTACAGAGAGTCAATCAAAATTGCTCTCAAAGCTAAATCCATTTTCCAAGTGTCTACCATTGTCATTTTGTGCCGAGAAACTAGTCGTACTTCTCATGCCAGGGAGTCAGCTTGAAAAACCACGGGATGGCATGCAGAACTTTGTGAACCTAAGGGAGATAAACCTTGCTGGGTGCAACCAATTGATAGAGTTGCCAGATTTGTCAACGGCCCAAAATCTTGAACAGGTTGATCTGACATACTGTGAAAGTTTACAGCATCTTCATCCATTAATTTTATCTCTCCCAAGATTGAGAGATCTGAAACTTTATGACTGCCGAAACCTGAAAAGTTTGAAATGTGAGAGTCCATCAAAATCTCTCTTGCACCTATATGTCTATGGTTGCTCTAGTCTCAAGGAATTTTCATTCTCATCAGACAAAATGGAGAATTTAAGTTTGGTAGGAACATGTGTCGAGATATTGGACTTTTCAACTGGGCCTATGGAGAAACTCGAGGCGCTCTATGTCAACGGCTCAGCATTAAAGAATCTTCCGATCAATGACATCTGTTACATGAGATCTCTCCAGGCGCTTCATCTTTATGATTGCGGAATAATTGATAAATCAAAGCTCCATGCCTTATTTGATGCTTTGCTATCTCTAGAAACAATTGATTTGAGAGGGACACGCAAATTGACTGAACTTCCAGACAATATCAAGCATCTCTCAAGGCTACGACATCTTAACGTAAGCGGTTGCAAGGACCTTCAATCTTTTCCCGAGCTTCCTCCATCCATTGAACATTTAGATGCCGGCAAATGCACATCATTAAAGACACTACAATTCACTTCCCATATTAAATCTCCATTGTCGACAGATGAAATAACGGCGGGTTCACCATTCTGTTCCTCGATTAGCTATCTCAAAAATCTTGTTTCGCTTAGTCTTAATGATTGTGAACAGTTGTATGAACTTCCTGCTGGCATCAAGCATCTTTCAAATCTACAGTATATTGACTTGAGCAATTGTAGAAGACTTCGCTCTCTGCCAGTGCTACCACCGTTCTTTGAACACATTCTTGCCCAGGGTTGCACATCATTGGAAACGCATGTTATGGAAAGTGCTTATTTCTTATTGAGGCGACTAGTATATGCATATAAAGGAGGTTACATTTCCTACTCCGGAAGAAAAGCCCCAGAGTGGTTTAGATTTAATCAGGTAGTAGAGGCTTCCAAAGATGTAACTATTGAGCTTCCTTTCCCCACCAGCGACGTAATTGGCTTCATTTTCTGCTCTGTTGTTTTTCAACGCTCTTCCTCCGCCCTTTCATGCATAATGGATCCTAGTGGTGGTTGGCCATGGAAATCAACAGCTGCTATCGGAGAAGTGACAAATTTCGATTCACATCAAGTTTTTCTGTGGGGTGAACCTTGCCCATTCAAGGGCTTCCATAAGAAGATGGACGATCAAAACACCAATTATAGACCAAAGGTGCTACTTAAATTCGATAATGATGCAGGAAGTGTGATTGAAGAATGTGGAGTCTTGCCAATATATGCCTCGGAATATCGCAACTTCATTCATCAAATGGAATTGCAGCCAAACTTGGATTCCCAAAAAGAGACTTGTCATGATGCTGATGAGAATTCATTTCATGGAATCCTAAAATATACTCGTTTCTCCTTGAATCAAGGAAAATGTGGCAATTTTGAAGGAAGTATTATTCCAGAATGGTTTACTTATAAAAGTTCAACAATAAACTATGAATCTCCAGACGCGCGGATCAGTGTTCGGTTTGCTCTGGATTTTGACAACTTAATAGGCTTCATTTTTTGCTTTGTTATACCCCAGTTCTCCTCAAAAAAAAGGGATGAATGTCACTCGTCATGTGATTTCTATTTACATGATGTGAGTGAAGGCAGGGGTTTGAAACTTGATAACCTTTTGAATGGTCCAATAGGATGGCACTATTCAGTGGAAAAATGGAATTCAGATGATGTTTTTCTATGGTACGATCCCCTGCACAGTGAACGTGTACTACGGAAACTCCGAAGAAAGGCGAGAGGTCATGATGAGGAGCTTGAATTTAAATTTCATATTGGTGATTATTTTGGTGATGATTATTTTTCCAATAATTGCAATTCTGAAAGGCACAATTGCTGGATCAAAGAATGTGGAGTTCGTCCAATATATGTCTCGGAGTACACAAACTTCCTTCTTCAACAAAAAAAATTCAAAGAAGGTATTGAAAAAAAGAGGCCTCGAAATATTGATGATGACCAGTACCAACTCCCTTCAACAAAGAAACTGAAGGAGTCTTCAATCATTCAATCTATTCCCCCAGAATCCTGA 3603 0.3936 MAKVVFAKLRSKFDRCYFLKNFIEKYEKHGSEHVRDELFQELSKDKSLEWLSCRKVLIVLDDVSNTKQLDELTSEAPRLGTGSKVIITSRDKHVLNGRVEKIHEAEALSYNNSLELFNLKAFHKVGYESEYEELVERALAYAKGIPLALTVLGSFLHSRPINQWVSVLNKLERMANKDIQDVLKLSYDGLDHEVKEIFLDIAFFFKGEWENYVAATLEGFGFHARIGLGILVDKALISYSHGAVWMHDLIQWMAFEIVRQENEKNPGGRSRLRNPDEIRDVLENNRGSGAIQGISLDLSQIKYLKLSADVFRKMTNLRYLRWDNFPLESFPLSFCAEKLVELHMPHSYLRKLWDGKQELVNLRNINLERSKKLIELPDLSTAERLERVTLFACESLCHLHPSILSLPRLEFVDLGMCKNLKSLGTESQSKLLSKLNPFSKCLPLSFCAEKLVVLLMPGSQLEKPRDGMQNFVNLREINLAGCNQLIELPDLSTAQNLEQVDLTYCESLQHLHPLILSLPRLRDLKLYDCRNLKSLKCESPSKSLLHLYVYGCSSLKEFSFSSDKMENLSLVGTCVEILDFSTGPMEKLEALYVNGSALKNLPINDICYMRSLQALHLYDCGIIDKSKLHALFDALLSLETIDLRGTRKLTELPDNIKHLSRLRHLNVSGCKDLQSFPELPPSIEHLDAGKCTSLKTLQFTSHIKSPLSTDEITAGSPFCSSISYLKNLVSLSLNDCEQLYELPAGIKHLSNLQYIDLSNCRRLRSLPVLPPFFEHILAQGCTSLETHVMESAYFLLRRLVYAYKGGYISYSGRKAPEWFRFNQVVEASKDVTIELPFPTSDVIGFIFCSVVFQRSSSALSCIMDPSGGWPWKSTAAIGEVTNFDSHQVFLWGEPCPFKGFHKKMDDQNTNYRPKVLLKFDNDAGSVIEECGVLPIYASEYRNFIHQMELQPNLDSQKETCHDADENSFHGILKYTRFSLNQGKCGNFEGSIIPEWFTYKSSTINYESPDARISVRFALDFDNLIGFIFCFVIPQFSSKKRDECHSSCDFYLHDVSEGRGLKLDNLLNGPIGWHYSVEKWNSDDVFLWYDPLHSERVLRKLRRKARGHDEELEFKFHIGDYFGDDYFSNNCNSERHNCWIKECGVRPIYVSEYTNFLLQQKKFKEGIEKKRPRNIDDDQYQLPSTKKLKESSIIQSIPPES 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5573g00011 1200 MobiDBLite consensus disorder prediction 1167 1183 - -
Pral5573g00011 1200 Pfam Leucine Rich Repeat 338 357 IPR011713 -
Pral5573g00011 1200 Gene3D Ribonuclease Inhibitor 432 574 IPR032675 -
Pral5573g00011 1200 Gene3D Ribonuclease Inhibitor 281 431 IPR032675 -
Pral5573g00011 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 201 IPR027417 -
Pral5573g00011 1200 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 439 559 IPR044974 GO:0006952
Pral5573g00011 1200 SUPERFAMILY RNI-like 295 769 - -
Pral5573g00011 1200 Gene3D - 107 191 IPR042197 -
Pral5573g00011 1200 MobiDBLite consensus disorder prediction 1184 1200 - -
Pral5573g00011 1200 Pfam NB-ARC domain 43 187 IPR002182 GO:0043531
Pral5573g00011 1200 SUPERFAMILY "Winged helix" DNA-binding domain 178 262 IPR036390 -
Pral5573g00011 1200 Gene3D Ribonuclease Inhibitor 712 800 IPR032675 -
Pral5573g00011 1200 MobiDBLite consensus disorder prediction 1167 1200 - -
Pral5573g00011 1200 Gene3D Ribonuclease Inhibitor 575 711 IPR032675 -
Pral5573g00011 1200 PRINTS Disease resistance protein signature 142 156 - -
Pral5573g00011 1200 PRINTS Disease resistance protein signature 50 64 - -
Pral5573g00011 1200 PRINTS Disease resistance protein signature 747 763 - -
Pral5573g00011 1200 Gene3D - 1 103 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5573g00011 Pral-Chr5573 133972 137977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5573g00011 637 786 WRKY Transcription Factor Family AT5G45050 30.653 6.52e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5573g00011 - - pcin:129289344 789.26