Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5573g00010 ATGGGCATTGTCGCTTCATCCTCTTCCTCTTCTGCACTTTCTTCCAAAAAGTATGATGTATTTATGAGCTTCGGAGGAGACAACACCCGCACCAACTTCACTAGCCATCTTTATACTGCCCTCTGCCGCAACAAGATAGAAACCTACATGGATTACAGACTTCACAAAGGAGATGAGATCTCACCTGCACTTATCCAAGCTATCAAGAACTCCACCATATCTTTGGTGGTGTTTTCGCAAAACTATGCTTCCTCAAAATGGTGTTTGGATGAGCTCACCCAGATACTCCAATGCAAAAGGGCTCAGGGGCAGATTGTTATTCCTGTGTTTTATAAAGTTGACCCTTCAGAAGTGCGGAAGCCAGAAGGGGCTTACAAGAAGGCATTTGAGAAACATGAGAGAGCTTTTCGTCGCAACATTCACATGGTGAACAATTGGAGAAATGCTCTTTTTGAGATGGCCAACTTAGCTGGGTGGGACTCTCAAACTTGTAGGGATGAATCAAAGCTCATTCAGAATATTGTCAACTATGTTTTAAGGAAACTGAATAATAGGTATCCATTCGCGTTGAAAGATCTTGTTGGAATTGATGAAAATTGCCACTGTATTGAATTGTTGCTGCAAAAGGCGCCAGTATTTGGAATCTGGGGTATGGGTGGCTTAGGCAAGACAACCATGGCCAAGGTTGTCTTTGCCAAACTTTTTTCTCAATTTGAAAGTAGCTGCTTCATGGAAAATGTTAGGGAAATGACAGAAAAGCATGGAATAAGTTATGTACGTGATAAACTTATATCGGAGCTATTAGATGATGAAAATTTGCATGATGGCCCATCTATAGTTTCAGGATCCACATTTGCTATGAGGAGACTTGACAGGAAAAAGGTTTTGATTGTGCTTGATGATGTATCCCATTCAAAGCATCTAGATAGTCTGGCTAAAGAATGTGGTAACTTGGGACCTGGCAGTAGAGTCATCATAACAACAAGAGATAAGCAGGTACTTGCTGGAAGAGTTGATGAGATACATGAGGCTAAGGCGCTGATTGATCATGAATCCCTAAAGCTATTCTGCTGCAAAGCCTTCCACAAAGACCACCCAGAAATTGGATATGAAGAACTATCAGAAAGGGCGGTTGCTTATGCCAAAGGGATTCCCTTGGCTTTGACAGTCTTGGGTTCATATCTTCACTCCAAGACTACCAAAGAATGGGAAAGTGCATTAAGAAAACTGAAAAAGACTCTCAATGAAGATATTCAAGAAGTATTAAAACTGAGTTATGACGAACTAAATGACGAGGACAAGGAAATGTTTGTAGATATTGCATGTTACTTAAAGGGTGAATGGGAACGAAATGTTATAAGATTATTTGAGAGCTATGGTCTCCATGCAAGTATTGGCATAAGAACCCTTTTAGATAAGACTTTAATAACTCTTGACTCCTTTAGAGTGCAAATGCATGACCTAATACAAGGAATGGGCAATGAAATTGTTCGTCAGCAGTGTTTAAAAGAACCTCGAAAAAGGAGCCATTTGTGGAATCATGAAGAAGTTTATGATGTATTGAAAAATAAAAAGGGTACTGATGCAATTGAAAGCATAACATTTGATATGTCTCAAATTAAAGAGGTATCCTTGACTGCTGATGCTTTCAAAAATATTCCTAATCTCAGAAGTCTCAAATTATATTCCACGTCTCCTAAAAACTGTGCAAACCTTCCTTCCGGCCTTGAGTCATTCTGTGACAGATTAAGGTACTTTTATTGGGATTTCTTTCCTTTGGAATCCCTTCCAGCATCAACCTTCTGTATGCAGAACCTTGTTGAAATTCACATGAAGTATAGCCATGTTACAAAATTGTGGGATGGTGTACAGTTGATATATCATTCCGGCAGTAAATCTGAGGCTTCTTCTCAGGGAGATGAGGGTGGTTACAATGTACAACTCTTGAAAAACCAGGACCTTGAAGGTTTTGAGCATTCTCATGTGCAGTGTGAGTTCGTCTAA 2004 0.3982 MGIVASSSSSSALSSKKYDVFMSFGGDNTRTNFTSHLYTALCRNKIETYMDYRLHKGDEISPALIQAIKNSTISLVVFSQNYASSKWCLDELTQILQCKRAQGQIVIPVFYKVDPSEVRKPEGAYKKAFEKHERAFRRNIHMVNNWRNALFEMANLAGWDSQTCRDESKLIQNIVNYVLRKLNNRYPFALKDLVGIDENCHCIELLLQKAPVFGIWGMGGLGKTTMAKVVFAKLFSQFESSCFMENVREMTEKHGISYVRDKLISELLDDENLHDGPSIVSGSTFAMRRLDRKKVLIVLDDVSHSKHLDSLAKECGNLGPGSRVIITTRDKQVLAGRVDEIHEAKALIDHESLKLFCCKAFHKDHPEIGYEELSERAVAYAKGIPLALTVLGSYLHSKTTKEWESALRKLKKTLNEDIQEVLKLSYDELNDEDKEMFVDIACYLKGEWERNVIRLFESYGLHASIGIRTLLDKTLITLDSFRVQMHDLIQGMGNEIVRQQCLKEPRKRSHLWNHEEVYDVLKNKKGTDAIESITFDMSQIKEVSLTADAFKNIPNLRSLKLYSTSPKNCANLPSGLESFCDRLRYFYWDFFPLESLPASTFCMQNLVEIHMKYSHVTKLWDGVQLIYHSGSKSEASSQGDEGGYNVQLLKNQDLEGFEHSHVQCEFV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5573g00010 667 SUPERFAMILY "Winged helix" DNA-binding domain 417 522 IPR036390 -
Pral5573g00010 667 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Pral5573g00010 667 Gene3D - 12 183 IPR035897 -
Pral5573g00010 667 Gene3D - 184 341 IPR027417 -
Pral5573g00010 667 SMART till_3 17 156 IPR000157 GO:0007165
Pral5573g00010 667 Gene3D Ribonuclease Inhibitor 508 654 IPR032675 -
Pral5573g00010 667 FunFam Disease resistance protein (TIR-NBS-LRR class) 348 430 - -
Pral5573g00010 667 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral5573g00010 667 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Pral5573g00010 667 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 645 IPR044974 GO:0006952
Pral5573g00010 667 Pfam TIR domain 17 187 IPR000157 GO:0007165
Pral5573g00010 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 440 IPR027417 -
Pral5573g00010 667 PRINTS Disease resistance protein signature 289 303 - -
Pral5573g00010 667 PRINTS Disease resistance protein signature 212 227 - -
Pral5573g00010 667 PRINTS Disease resistance protein signature 551 567 - -
Pral5573g00010 667 PRINTS Disease resistance protein signature 381 395 - -
Pral5573g00010 667 SUPERFAMILY RNI-like 531 623 - -
Pral5573g00010 667 Pfam NB-ARC domain 212 428 IPR002182 GO:0043531
Pral5573g00010 667 Pfam Leucine Rich Repeat 605 624 IPR011713 -
Pral5573g00010 667 Gene3D - 346 430 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5573g00010 Pral-Chr5573 121279 123873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5573g00010 14 622 WRKY Transcription Factor Family AT4G12020 31.579 1.19e-81 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5573g00010 - - pcin:129288608 765.377