Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5573g00009 ATGACGAAAATGAGGCGTAGGAGGAAATCGTTGCGGCCTAAGAATCTTGGGCGACCGAGGCAGTTGAAGAGAGGGATGGAGGTAGGGTTGGAACGGAAGGCGACGGGACGGCAGAGCATTAGGTGTAGTTGTGAGGAAGGTTGGCGAGGAGAATCTGGACGTCCGGCGATGAACCTAGATCTGATCGGGTGCGAGGAATGTTGGCCGCGAGGAAGAGTTAAAAGTCAGTCAACTCTGATCACTGCCTCACGCCTTCGTCACCATTTCAATATCATGGCTGCTACTGCTTCTTCGTCATCTTCCTCCTCTTCCTCTTCACTTCCTCCCAAGAAACATGATGTGTTTCTTAGTTTCAGAGGCGAGGATACTCGCAGAACATTCACCAGCCATCTCTTCACTGCCTTGTGCAAAAGAGGAATTCGAACCTACATAGATAATGAGCTCAGAAAGGGGGATGACATCTCAGACGCACTCATCCAGGCAATTAAAGATTCAAGTATGGCTGTGGTGATCTTCTCTGAGAACTATGCCTCCTCAAAATGGTGTTTGAATGAACTTATCCAGATCCTTTGGTGTAAAGAGGTCCAAGGACAGCTTTTTATTCCTGTCTTCTATCAAATTGACCCATCTGATGTGCGCAATCAGAGGCGAACTTATATGGAGGCATTCGCAAAACATGAAAGAGACTCCAGGCTTAATCAAGAGAGGGTGAACAAGTGGAGACAAGCTCTCTTTATAACTGCAAATTTGGGTGGCTGGGACTCTCGAACCTTTAGGGACGAATCAGAACTCATTCAAAACATTGTCAACCACGTTCAGCAAAAGATTAACCTCAGTTATCCAAGTTCATTGATGGGTCTTGTTGGAATTGATGAAAATTGTAACAAGATTGAAAGGTTACTGGAACAAGTCCCAATAATTGGAGTTTGGGGTATGGGTGGTGTAGGTAAGACTACCATGGCTAAGGCTTTATTTACCAAACTCTCCTTCAAATTTGAGAGTTCTTGCTTTTTGGAAAATGTAAGAGAAGAGGTAGAAAAGCAAGGATTGACATACGTACGCAACAACCTTCTGTTTGAGCTACTGAAGGAAGAAAGTTTCCCTCATAGGCCACCTAATGTTGCAAGTAACGCCTCTGTTATGAGAAGACTAAGTTGTAAAAAAGTCTTCATAGTGCTTGACGATGTTAGTAGTCGGAAGCAATTAGAGTATTTAGCTCCATATTGTGAATACTTGGGACCAGGCAGTAAAGTCATCATTACAACAAGGCATAAGCAATTGCTTGTAATTGCAGGAGTTGACGCAATACATGAGGCCCGGCCTTTGAGCGCTCGCAAGTCTGTTGAGCTCTTCAACCTCAAAGCCTTCCACTCGTACAATCCAAAAATTGGATATGAATCCCTTTCACAAAAGGTTGTTCATTACGCAAAAGGCATTCCGTTGGTTTTGGTAGTATTGGGCTCATTTCTTCGTTCAAAAACTCCCAAAGAATGGGATAGTGCATTGTCAAAACTAAAGAAGATTCCCAATGAAGACATTCTACAAGTTCTGAAATTGAGCTTTGATGGATTAGATTTTGAAGAGAAGGAAATGTTTCTAGACATTGCATTTTTCTTGGATGGTGAAGGGAAAGAAGATGTGATTACACTATTAGAAAGCTTTGGTTTCCATGCGAGAATTGGTTTAGAAACCCTTGTAGATGGAACTCTTATAACTATTATCGATAGTGTGGTCCACATGCATGACTTAATGAAAGAAATGGGCTATGAAATTGTTCGTCAACAATGCATTAAAGAACCTGGAAGACGAAGTAGATTATGTGATCCAGAAGAAGTTTATCATGTGCTGAGAAATAATACAGGGACTGATGCAATTGAAGGCATCGTATTAGATCTGTCCAAAATTAGACATTTACACTTGAGCATTGATACCTTCAAAAAGATGTCTAATCTGAGATTTCTAAAATTCTATTCACCCGCGGATAGGAGATATTGTAAGGTGGACCTGTCTTCTGGCCTTCAATTATTATCTGAACGATTAAGGTACCTTCAATGGGATGGTTATCCTTTGGAGTCTCTACCATCCTCATTTTGTCCAGAGAAACTTGTTGTACTTCGCATGCCAAACAGCCAAGTTAAAAAACTTTGGGATGGAGTGCAGGATTTTGTGAACTTGAGGAGAATAAATCTTGCTGGATGCAAACGATTGATAGAGCTACCTGATTTTTCGAAGGCACAGAATCTTAAATCGGTGGATCTTGAATCATGCGAAAGTTTGTGTCATGTTCACCCATCTATCTTATCTTTACAAGGACTTGTTACTTTGAATCTCGATAAATGCATTAAACTGAAGGAACTTCGTGGTGAGAATCCTCTACAGTCTCTCAAAGCGATTTATCTCAATTGGTGCTTTAGTTTGACAGAATTTTCATTGTCATCTGAAGAAATCGCGAGTTTAGAACTAGAAACAACTCGCATTGAGATGTTGGACTCATCAATTGGGCATTTCAGTAAGCTTAAACAGTTCAGTGTTAATGGTTCAAGACTGAAGAGCCTTCCAATGAATGAGTTATGCTGTTTAAGATCTCTAGAGGAGCTACGGCTTCCTAATTGTGAGCAAGTAATTGACAAACTGAAGCTGCACATTCTGTTTGATGCCTTGCGTTTTTTGCGAAAACTACATTTGGATGGGTGTCGGAACTTAACTGAACTTCCTAACAATATCAAGCATCTTTCAGGGCTAAAAGTTCTTTCTTTGAAGAATTGTGATAGACTACAATCTCTACCAGAGCTTCCACCATCCATCGAAGAATTAGATGCCACCCACTGCCCATCATTAAGGACAATAACTCCCAAATATTCTTTGTCCCCAGAAGAAGGAATGATGGCTTTAACACCCTATCCCTCAATTGGATATCTTACGAAACTTAGAAAGCTTCGCCTTAATGTCTCAAATCTGATGAACTTTTCAATTGAGCAGTTATGTTATTTGAGATCTCTTAAGGAGCTCACTCTTCTTGATTGTGGACTAGAGATTGGAAAGTCAAACCTGCTCAAGTTATTTGATGCCTTGCCCTCTTTCGTAGACCTTTATTTGGAAGGATGTAGTAACTTGCATGAACTTCCTGACAACATCAGCTCCTTATCATCGTTATATTTATTGGGATTAGTACGAAGCAATGTAGAGTACTTACCTTCTAGCATCAAGCATCTCCTGAAGCTAGACTACATTTACTTGACCAATTGCAAGAGGCTTCGATCTCTACCAGAACTTCCACCATTCACTAGATACGTGAAGGCCACTAGTTGCTTATCATTGGAGGTTGCGTTCCCTTTAACAACATCTAGGCCGCAACGGAAATATCTATTGGAGTCCCTCTTTCTTGAAAACTGCTCGAAGTTGGAGCATTCACTTTCCAGTATTGAAGAATATGCTTATTTGTCGTTGAAGCGAGTGGCGTATCTCAATCGAACTGGTGCTTTTTGTTACCCAGGGAGAAAAATTCCAGAGTGGGTTAGATATAACCAGACAACTAAGGCTTCAAGTTTCATAACCATTGAACTCTCTTCATCTGTGAACAACTTGTTGGGCTTTGTTTTCTGCTCTGTTCTTCCTCAGTTCACGTCAAAGCCAAATTGTCGGAGTTACCTGAAATGCCAAATATACTTTGAAGATGGTGAAGAAGTCAGAGGCAAGGGTGACGATATGCCGATAACAGACTTAAATTCGCATCATGTTTTTCTACGGTATGATCCACTCTACTCTGTATGCATTTTAAGGGAACTTATAGAAAGAGAGGATCAAGGCATTAAAGGTAACTCGAAGCTTTCATTTGAGTTTTCTGTTGTCTCTTATGATGAGAACTACTGTACAGCCAAACATGATCTGATAGAAGCATGTGGGGTTTGCCCAATATATGCTTCAGAATATCACAATTTCCTTCAACAAATGGAATTCGGGTTGGATTTGGGTAGTCAAAAGAAGAGTGGTTGTGATAACGATGAGCATTCACTTTGTGGAATTATGGAATATGCTAGTTGCTCATTGAAGCGAGTATACGGCAATTTTGAAAGTGTACATGTTTCTTCCCCTGAAATGCCAAATACTCCGGCGGGGTTTCTAGACAAAACCACGGATACTCACTCAGTTTCTTTTCAACTTCCAGATTTTGATGACTTGATGGGTTTCATTTTTTGTTTTGTTATTCCTCAATTCTCCTCAAAAGAAAGGGATCGAAGTCACTCAAGCTGTCTGTGCGAATGGTCATATGATTTTGATGTTGATAAAAAGACCTCTGTAAGTCATTATTTTGAAGGCCCAAGAGGATGGCATTATTCGATGACAGAATTGAATTCAGATAATGTCTTCCAATGGTATGATCCCCTCTTTTGTGAATTCATATTAGATCAAGTTAGAAGAAAAAGAGCTGGGGATGCGGGGTTGCTTTCATTTGAATTTGAGTTTGGTGATTGCTTGATTAAAGAATGGGGAATCCACCCAATATATGCCTCAGGATATAACAGTTTCCTTCAACAAAAGGAATTGAAATTGAGGCTAGGCATGAAGAGACCTCGAGATGCTTGTGATGAGGAAGAACTACTTACTCTAACAAAGAAATTGAAGGCATCTTCTGTTCAACCTGCCGACGTTGACGAGTTACTACTCTCACTGTCTGAATTGAATTTGGAATTTGCGAAGGATGGCACTCTACAAAAATAA 4719 0.405 MTKMRRRRKSLRPKNLGRPRQLKRGMEVGLERKATGRQSIRCSCEEGWRGESGRPAMNLDLIGCEECWPRGRVKSQSTLITASRLRHHFNIMAATASSSSSSSSSSLPPKKHDVFLSFRGEDTRRTFTSHLFTALCKRGIRTYIDNELRKGDDISDALIQAIKDSSMAVVIFSENYASSKWCLNELIQILWCKEVQGQLFIPVFYQIDPSDVRNQRRTYMEAFAKHERDSRLNQERVNKWRQALFITANLGGWDSRTFRDESELIQNIVNHVQQKINLSYPSSLMGLVGIDENCNKIERLLEQVPIIGVWGMGGVGKTTMAKALFTKLSFKFESSCFLENVREEVEKQGLTYVRNNLLFELLKEESFPHRPPNVASNASVMRRLSCKKVFIVLDDVSSRKQLEYLAPYCEYLGPGSKVIITTRHKQLLVIAGVDAIHEARPLSARKSVELFNLKAFHSYNPKIGYESLSQKVVHYAKGIPLVLVVLGSFLRSKTPKEWDSALSKLKKIPNEDILQVLKLSFDGLDFEEKEMFLDIAFFLDGEGKEDVITLLESFGFHARIGLETLVDGTLITIIDSVVHMHDLMKEMGYEIVRQQCIKEPGRRSRLCDPEEVYHVLRNNTGTDAIEGIVLDLSKIRHLHLSIDTFKKMSNLRFLKFYSPADRRYCKVDLSSGLQLLSERLRYLQWDGYPLESLPSSFCPEKLVVLRMPNSQVKKLWDGVQDFVNLRRINLAGCKRLIELPDFSKAQNLKSVDLESCESLCHVHPSILSLQGLVTLNLDKCIKLKELRGENPLQSLKAIYLNWCFSLTEFSLSSEEIASLELETTRIEMLDSSIGHFSKLKQFSVNGSRLKSLPMNELCCLRSLEELRLPNCEQVIDKLKLHILFDALRFLRKLHLDGCRNLTELPNNIKHLSGLKVLSLKNCDRLQSLPELPPSIEELDATHCPSLRTITPKYSLSPEEGMMALTPYPSIGYLTKLRKLRLNVSNLMNFSIEQLCYLRSLKELTLLDCGLEIGKSNLLKLFDALPSFVDLYLEGCSNLHELPDNISSLSSLYLLGLVRSNVEYLPSSIKHLLKLDYIYLTNCKRLRSLPELPPFTRYVKATSCLSLEVAFPLTTSRPQRKYLLESLFLENCSKLEHSLSSIEEYAYLSLKRVAYLNRTGAFCYPGRKIPEWVRYNQTTKASSFITIELSSSVNNLLGFVFCSVLPQFTSKPNCRSYLKCQIYFEDGEEVRGKGDDMPITDLNSHHVFLRYDPLYSVCILRELIEREDQGIKGNSKLSFEFSVVSYDENYCTAKHDLIEACGVCPIYASEYHNFLQQMEFGLDLGSQKKSGCDNDEHSLCGIMEYASCSLKRVYGNFESVHVSSPEMPNTPAGFLDKTTDTHSVSFQLPDFDDLMGFIFCFVIPQFSSKERDRSHSSCLCEWSYDFDVDKKTSVSHYFEGPRGWHYSMTELNSDNVFQWYDPLFCEFILDQVRRKRAGDAGLLSFEFEFGDCLIKEWGIHPIYASGYNSFLQQKELKLRLGMKRPRDACDEEELLTLTKKLKASSVQPADVDELLLSLSELNLEFAKDGTLQK 1572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5573g00009 1572 SMART till_3 111 250 IPR000157 GO:0007165
Pral5573g00009 1572 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 112 810 IPR044974 GO:0006952
Pral5573g00009 1572 FunFam Disease resistance protein RPS4 622 814 - -
Pral5573g00009 1572 SUPERFAMILY L domain-like 884 1091 - -
Pral5573g00009 1572 MobiDBLite consensus disorder prediction 1 32 - -
Pral5573g00009 1572 Gene3D Ribonuclease Inhibitor 612 790 IPR032675 -
Pral5573g00009 1572 Gene3D Ribonuclease Inhibitor 791 946 IPR032675 -
Pral5573g00009 1572 Gene3D Ribonuclease Inhibitor 965 1153 IPR032675 -
Pral5573g00009 1572 PRINTS Disease resistance protein signature 909 925 - -
Pral5573g00009 1572 PRINTS Disease resistance protein signature 476 490 - -
Pral5573g00009 1572 PRINTS Disease resistance protein signature 306 321 - -
Pral5573g00009 1572 PRINTS Disease resistance protein signature 383 397 - -
Pral5573g00009 1572 Gene3D - 442 525 IPR042197 -
Pral5573g00009 1572 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 535 IPR027417 -
Pral5573g00009 1572 SUPERFAMILY "Winged helix" DNA-binding domain 512 616 IPR036390 -
Pral5573g00009 1572 MobiDBLite consensus disorder prediction 1 19 - -
Pral5573g00009 1572 SUPERFAMILY L domain-like 628 952 - -
Pral5573g00009 1572 SUPERFAMILY Toll/Interleukin receptor TIR domain 101 253 IPR035897 -
Pral5573g00009 1572 Pfam Leucine Rich Repeat 701 720 IPR011713 -
Pral5573g00009 1572 Gene3D - 276 433 IPR027417 -
Pral5573g00009 1572 ProSiteProfiles TIR domain profile. 110 276 IPR000157 GO:0007165
Pral5573g00009 1572 Pfam TIR domain 111 282 IPR000157 GO:0007165
Pral5573g00009 1572 Gene3D - 109 275 IPR035897 -
Pral5573g00009 1572 Pfam C-JID domain 1163 1309 IPR045344 -
Pral5573g00009 1572 Pfam NB-ARC domain 303 508 IPR002182 GO:0043531
Pral5573g00009 1572 FunFam Disease resistance protein (TIR-NBS-LRR class) 108 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5573g00009 Pral-Chr5573 112177 118716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5573g00009 110 917 WRKY Transcription Factor Family AT4G12020 32.729 1.95e-104 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5573g00009 - - pcin:129289344 2082.76