Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5573g00007 ATGTTTGTTATAGCTTCATCATCTTCTTCCTCTTCCAGGAAATATGATGTGTTTCTGAGTTTCAGAGGAGAGGACACTCGCAGATCCTTCACCAACCATCTCCATACTGCCTTATGCCTCGAAGGTATTGAGACATACATTGATCATAAGCTCCCAAAAGGTGATGACATCTCCCAATCACTCATTGAAGCAATTCAGGATTCATCCATCTCTGTGGTGGTCTTATCTCAAAACTATGCGTCCTCCAAATGGTGTTTGAATGAGCTCCTTCAGATCCTTCGCTGCAAACAAAAGCAGGCACAGATTGTTGTTCCTATCTTCTATGAAATCGACCCATCTCATGTGCGCAATCAGAAAGGAACTTATGAGAGAGCATTCTTAGAACATTTGGAGAAAAAACCAACGAAGGTGAGGGAGTGGAGACAAGCACTTTTTGAGATTGCGAATTTAGCAGGATGGGACTCCCGCAACTACAGGGATGAAGCAGAACTCATTCAAAATATTGTCAATGACATCATCAACAAATTGAACCATGGGTACTCAGGAAGTGTATTAAAAAATATTGTTGGAATTGATGAGAATTTGGATCGTATTGAGTCGTTCCTAGAAAGATCCTCAACAATTGGGATTTGGGGGATGGGCGGGATAGGCAAAACAACAATGGCTAAGGTTGTGTTTGCCAAACTCCGCTCTCAATTTGATAGTTGCTGCTTCTTAGAAGATTTTACAGAAAAGTATGAAAAGTATGGGTTTGAATATGTACGTGACAAACTTTTCAGTGAACTATCAAAGAATATATCTCTTGAGAGGCTCAATCGTAGAAAAGTTTTGATTGTACTTGATGATGTTGGCAACACAATGCATTTAGATAAGTTGGAAAGTGAAGTTCCTCATTTGGGACCTGGTAGTAAAATCATCCTGACAAGTAGAGATCGGCATGTGCTTATTGGAAGAGTTGATGAAATACATACGGCCCAGGCATTGAGCTCCGACAAGTCCTGTGAGCTTTTCAACCGTGAAGCCTTCCGCAAAGATGGTTTTAAACGTGAATATAAAGAACTAGTTGAAAGAGCTCTTGCTTATGCCCAAGGCGTTCCATTAGCCTTAACCGTTTTGGGTTCATTCCTTTATTCCAGAACTGTAGAAGTATGGGAAAGTGCATTGAGGAAATTAGAAAGGACACCCCATCCAGATATTCAAGCTGTGTTAAAATTAAGCTACGATGGACTTGATGATGAAGTGAAGGAGATATTTTTAGACATTGCTTGTTTTTTTAAAGGTAAAACTAGACAACATGTAGAAGCAATGCTAGAGATCTTTGGCTTTCACACAGGCATTGGTTTGGGAATACTTGTGGATAGGGCGTTGATAAGTCTTAGTTATGGTGTGGTATGGATGCATGATTTAATTCAATCAATGGCTTTTGAAATTGTTCGCAAAGATTGTAAGAATCCTGGAGGGCATAGTCGACTATGGAATTCCGATGAGATCGTCGACGTTCTAAAACATAATCTAGGAAGTGATGCAATTCAAGGCATAAGTTTAGATTTGTCTCAAATTAAGGAATTACAATTCAGTGCTGATGCCTTTGGAAAGATGCCAAATTTAAGGTTTCTGGAACTCTATTCATCCAACCATGAGAGGTCGTGTATTGTGAATCTTCCTCCAATGCTTGAATCATTTCCTAATTCATTACGGTATCTTCGATGGGACAATTTTCCTTTAAAGTCTTTGCCATTGTCATTCTGTGCTGAGAAGCTAGTTGAACTTCACATGCCCTGTAGCCGCCTTCAAAAACTATGGGATGGCAAGCAGGACTTGGTGAATTTAAGGAATATAGACCTTTGGGGATCCGGACAATTGATAGAGTTGCCAGATTTGTCAGCAGCTAAAACACTTGAACGGGTTGTTCTTCAAAGCTGTGAAAGTTTATGCCATCTTCATCCATCCGTTTTATCTCTTCCGAGATTGAAGTCTGTGAATCTTGCACTTTGCAGAAACCTAAAGAGTTTGAAAACGGAGAGTCAATCAAAATCGCTCTCGCGACTAGATGTGGATGACTGCGATGGTCTCAAGGAATTTTCATTCTCTTCGGACAAACTTACTTCTTTATATTTATGGACCTCACCAGTCGAGAATATAGACTTTTCAATGGGGCATATGGAGAACCTTCAGAGTCTCTCTCTTAATGGTTTGAAACTAAAGAATCTTCCCATTAACGACATTTGTTGCATGAGATCTCTTGAGGAGCTTCATCTTGATTATTGCACGGGAATGATTGACAAATCAAAGCTCCATAGCTTATTTGATGCTTTGCGATATCTGGAATCACTTTCTTTGAAAGGCTCATGCACATTAACGGAACTTCCAGACAATATCAAGCATCTCTCGAGGCTACATTCTCTTGATGTAAGCGGTTGCAGATACCTTCAATCTTTACCGGGACTTCCTCCATCCATTGAAGAATTACATGCCAACAGCTGCACATCATTAAAGACGCTACAATTCCTTCAATCTCCATTGTTGGCAGATGAAATAACGTTGGGGTCAGCACTCCGTTCCTCACCCAGTTATCCCCAAAATCTTCGAGATCTTTTTCTTGGTGGCTGTAAACAGTTGTGTGAACTCCCTGAAAGCATCGGCTCGTTATCTTCATTGTCTTCACTGGATTTGAGTGGAACTATGGTAGTGAGCTTGCCTGCTAGTATCAAGTATCTCTCAAATCTAAAAGAAATACGCTTGACTAATTGTACAAGGCTTCGTTCTCTGCCTGCTAGTATCGAGTATCTCCGAAATCTACAAAAAATATACGCTGACTAA 2820 0.4025 MFVIASSSSSSSRKYDVFLSFRGEDTRRSFTNHLHTALCLEGIETYIDHKLPKGDDISQSLIEAIQDSSISVVVLSQNYASSKWCLNELLQILRCKQKQAQIVVPIFYEIDPSHVRNQKGTYERAFLEHLEKKPTKVREWRQALFEIANLAGWDSRNYRDEAELIQNIVNDIINKLNHGYSGSVLKNIVGIDENLDRIESFLERSSTIGIWGMGGIGKTTMAKVVFAKLRSQFDSCCFLEDFTEKYEKYGFEYVRDKLFSELSKNISLERLNRRKVLIVLDDVGNTMHLDKLESEVPHLGPGSKIILTSRDRHVLIGRVDEIHTAQALSSDKSCELFNREAFRKDGFKREYKELVERALAYAQGVPLALTVLGSFLYSRTVEVWESALRKLERTPHPDIQAVLKLSYDGLDDEVKEIFLDIACFFKGKTRQHVEAMLEIFGFHTGIGLGILVDRALISLSYGVVWMHDLIQSMAFEIVRKDCKNPGGHSRLWNSDEIVDVLKHNLGSDAIQGISLDLSQIKELQFSADAFGKMPNLRFLELYSSNHERSCIVNLPPMLESFPNSLRYLRWDNFPLKSLPLSFCAEKLVELHMPCSRLQKLWDGKQDLVNLRNIDLWGSGQLIELPDLSAAKTLERVVLQSCESLCHLHPSVLSLPRLKSVNLALCRNLKSLKTESQSKSLSRLDVDDCDGLKEFSFSSDKLTSLYLWTSPVENIDFSMGHMENLQSLSLNGLKLKNLPINDICCMRSLEELHLDYCTGMIDKSKLHSLFDALRYLESLSLKGSCTLTELPDNIKHLSRLHSLDVSGCRYLQSLPGLPPSIEELHANSCTSLKTLQFLQSPLLADEITLGSALRSSPSYPQNLRDLFLGGCKQLCELPESIGSLSSLSSLDLSGTMVVSLPASIKYLSNLKEIRLTNCTRLRSLPASIEYLRNLQKIYAD 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5573g00007 939 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Pral5573g00007 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 694 IPR044974 GO:0006952
Pral5573g00007 939 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 178 - -
Pral5573g00007 939 SMART till_3 14 150 IPR000157 GO:0007165
Pral5573g00007 939 Gene3D Ribonuclease Inhibitor 695 848 IPR032675 -
Pral5573g00007 939 SUPERFAMILY L domain-like 513 837 - -
Pral5573g00007 939 SUPERFAMILY "Winged helix" DNA-binding domain 398 502 IPR036390 -
Pral5573g00007 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 421 IPR027417 -
Pral5573g00007 939 Gene3D - 8 178 IPR035897 -
Pral5573g00007 939 Pfam NB-ARC domain 195 406 IPR002182 GO:0043531
Pral5573g00007 939 Gene3D - 327 411 IPR042197 -
Pral5573g00007 939 PRINTS Disease resistance protein signature 362 376 - -
Pral5573g00007 939 PRINTS Disease resistance protein signature 207 222 - -
Pral5573g00007 939 PRINTS Disease resistance protein signature 794 810 - -
Pral5573g00007 939 PRINTS Disease resistance protein signature 270 284 - -
Pral5573g00007 939 Gene3D Ribonuclease Inhibitor 849 939 IPR032675 -
Pral5573g00007 939 SUPERFAMILY L domain-like 828 937 - -
Pral5573g00007 939 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 153 IPR035897 -
Pral5573g00007 939 Pfam Leucine Rich Repeat 586 605 IPR011713 -
Pral5573g00007 939 Pfam TIR domain 14 181 IPR000157 GO:0007165
Pral5573g00007 939 Gene3D - 179 320 IPR027417 -
Pral5573g00007 939 Gene3D Ribonuclease Inhibitor 502 694 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5573g00007 Pral-Chr5573 69259 72921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5573g00007 778 936 WRKY Transcription Factor Family AT4G12020 28.834 1.33e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5573g00007 - - pcin:129287787 964.526