Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5573g00006 ATGGCAAATGCTGTATTTGCCAAATTATCTTCTCAGTATGACTCTTGCTGCTTCTTGGAAAACATTAGGGAAAAAACAAAAAAAAAAGGATTGGAACGTGTTTGTAGCTCTCTTGTCTCGGAGCTGCTAGGGCAAGATATGCCAAGTAACCCATCAAATGGTTTAAGAAATGCCTTTGTTGCTAGAAGGCTCGCCTATGAAGAGAAGCAAACTTTTCTAGACATTGCATGTTTCTTAAAGGGTGAAAGTGAAGGATTTGTAGAAGAGCTATTAAAGAGCTATGAATTCCATCCAACTGTTGGCATCCAAACCCTTATAGATAAGGCTTTAATTCTCAAGAACAATGGGAAGGTTGAGATGCATAACTTAATACAGGAAATGGGTCTGCAAATTGTTCGTGAAGAGAATGTCAATGAACCTGGAAAAAGGAGTAGATTATGGGATCCTAGCGAAATCTATGATGTATTGAAAAATTGTGAGGATTTAGCGAATTTAAGAAGAGTAAAACTTCGTGGTTGTTTTATGCTGATGAAGTTGCCCGATTTTTCCAAGGCTCATCGTCTTGAAAGCGCAGATCTAAGATTTTGTTGGTGTTTGCCTCAAGTGCATCCATCTCTCCTATCCCTGCACAGTCTCATTTATTTGGATGTAAGCGGCTGCAGTCGTCTTGAGAGTCTCCATAGCATGATTCATCTAAAATCTCTCAAAGAAGTCAATATAAGTAGCTGCCGCAGTCTTAAGGAGTTTTCAATGTCATCATCAGAGCTAACATCCTTAGATTTAGATGGAAGTGGAATAGAAGAATTGAGCCCATCAATTGGGCGTTGTTCAAAGCTCAGAAGACTCAATCTCGGTGATACAAAATTGAAGAATATAAAGGTATTAAGTTGCTTTACATCTCTGGATGTACTCCGTGTTTCCCGGCAGAAGATTGACAATGTCGACCTACGTGTGCTATTTGATGGCTTACGTAGTCTCCAGTCACTGACTCTCGAGATGTGCTGTGACTTAACTGAACTCCCAGATAACATCAAACACCTCTCGAGTCTGCAAGAGCTTTATTTAACTGGTTGTAGGAATCTTAAATATTTGCCAGAGCTTCCCCCCTCCCTTAAATTATTAGATGCCACTGATTGCACAGCACTCTCGTTCGCCCTTTCCTTAGTTCATCACCTTAGCAATCTCAATCGTCTCCTGCTCAATGCTTCAAGTCTTTGGCATCTTCCACGGACCCTGCTTTGTTATTTTAAACTCGTGGAGCTTCGTATTCAAAATTTCAGGCAGAGAGTGAGAGACGCGGAGCTGGCAGTTCCATTTGATGCATTGCCATCTTTAGAAGTGCTGTCTTTGCAGGAGTGGCCCAGCCTAATTGAACTCCCCAACAATATTCGGCACCTTTCTGAGCTACAATATCTCTCCATAGAAGGCTGCATCAGGCTGCGGCGTTTACCAAAACTTCCTCCATCCCTTAGAAAGTTGATTGCCACAAACTGCATAACACTGGAGACGGTGTCTGCTTCAACGATTTCAAGCACACCTGAGAATTATGGTGAAAAAATCTTTTCATTCATCAACTGTGTGAACTTAGATCTGGGCGCCATTAAAGAACAAGCCATGTTGTTGTTAGAGAAAGCAGGTTCATGA 1644 0.4142 MANAVFAKLSSQYDSCCFLENIREKTKKKGLERVCSSLVSELLGQDMPSNPSNGLRNAFVARRLAYEEKQTFLDIACFLKGESEGFVEELLKSYEFHPTVGIQTLIDKALILKNNGKVEMHNLIQEMGLQIVREENVNEPGKRSRLWDPSEIYDVLKNCEDLANLRRVKLRGCFMLMKLPDFSKAHRLESADLRFCWCLPQVHPSLLSLHSLIYLDVSGCSRLESLHSMIHLKSLKEVNISSCRSLKEFSMSSSELTSLDLDGSGIEELSPSIGRCSKLRRLNLGDTKLKNIKVLSCFTSLDVLRVSRQKIDNVDLRVLFDGLRSLQSLTLEMCCDLTELPDNIKHLSSLQELYLTGCRNLKYLPELPPSLKLLDATDCTALSFALSLVHHLSNLNRLLLNASSLWHLPRTLLCYFKLVELRIQNFRQRVRDAELAVPFDALPSLEVLSLQEWPSLIELPNNIRHLSELQYLSIEGCIRLRRLPKLPPSLRKLIATNCITLETVSASTISSTPENYGEKIFSFINCVNLDLGAIKEQAMLLLEKAGS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5573g00006 547 Gene3D Ribonuclease Inhibitor 255 366 IPR032675 -
Pral5573g00006 547 SUPERFAMILY L domain-like 120 424 - -
Pral5573g00006 547 SUPERFAMILY L domain-like 439 514 - -
Pral5573g00006 547 Gene3D Ribonuclease Inhibitor 145 254 IPR032675 -
Pral5573g00006 547 Gene3D Ribonuclease Inhibitor 368 516 IPR032675 -
Pral5573g00006 547 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 156 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5573g00006 Pral-Chr5573 49863 52458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5573g00006 68 539 WRKY Transcription Factor Family AT5G45050 25.800 1.25e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5573g00006 - - pcin:129288608 320.087