Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5573g00005 ATGTTTGCCATAGCTTCCCCATCATCATCTTCTTCTTCTAGGAAATATGATGTGTTTCTGAGTTTCAGAGGAGAGGACACTCGCAGATCCTTCACCAGCCATCTCCATACTGCCTTGTGCCTCAGAGATATTGAGATATACATTGATTATAAGCTCCCAAAAGGCAATGACATCTCCCAATCACTCATTGAAGCAATTCAGGATTCATCCATCTCTGTGGTGGTCTTCTCTCAAAACTATGCCTCCTCCAAATGGTGTTTGAATGAGCTCCTTCAGATCCTTCGCTGCAAACAACAGCAGGCACAGATTGTTGTTCCTATCTTCTATGAAATCGACCCATCTCATGTACGCAAACAAAGGGGAGCTTATGAGAAAGCATTCGCAGAACATTTGGAGAAAAACCCAGAGAAGGTGGAGGAGTGGAGACAAGCACTTTTTGAGATTGCAAATGTAGCAGGATGGGACTCCTGCAACTACAGGGATGAAGCAGAACTTATTCAAAATATTGTCAATGACGTCATCAACAAACTAAACCATGGATACTCAGGAAGTGTATTAGAAAATATTGTTGGAATTGATGAGAATTTGGATCATATTGAGTCGTTGTTAGAAGAATGCTCAACAATTGGGATTTGGGGGATGGGGGGGATAGGCAAAACAACAATGGCTAAGGCTGTGTTTACCAAGCTCCGCTCTCAATTTGATAGTTGCTGCTTCTTGAAGAATTTTACGGAAAAGTATGAAAAGCATGGCTTAGAATATGTACGTGATGAACTTTTTCGAGAATTATCAAAGAATACATCTCTTGGGAGGCTCAATCGTAGAAGAGTTTTGATTGTACTTGATGATGTTAGCAACACAAAGCAGTTAGATGAGTTGAAAAGTGAAGCTCCTCCTTTGGGACCTGGTAGTAAAGTCATCATAACAAGTAGGGATAAGCATGTGCTTCATGGAAGAGTTGATAAAATACATGAGGCCAAGGAATTGAGCTACAGAAATTCACTTGAGCTTTTCAACGTCAAAGCCTTCCACAAAGATGGTTATGAAAGGGAATATGAAGAACTAGTTAAAAGAGCACTTGCTTATGCCAAAGGCATCCCACTGGCCTTAACCGTTTTGGGTTCGCTTCTACATTCCAGACCTGTAGATCAATGGGAAAGTGCGTTGAGAAAATTAGGAAGGATGGCCAATGAAGATATTCAAGAAGTGTTAAAATTGAGCTACGATGGACTTGATGACGAAGTGAAGGAGATATTTTTAGACATTGCTTGTTTTTCTAAAGGTCAATCTGGACAATATGTAGAAGCAATGCCACCAGAGATCTTTGGCTTTGGCGCAAGCATTGGTTTGGGAATTCTTGTGGATAGGGCATTGATAAGTCTTAGTCATGGTGCGGGAAGTGACGCAATTCAAGGCATAAATTTAGATTTGTCTCAAATTACAGAATTGCAATTGAGTGCTGATTCCTTTGGAAAGATAACAAATTTAAGGCTTCTGAAACTCTATTATTCATCCTTTCATAGAAGATCGTGTGTTGTGAATCTTCCTTCAGGGCTTGAATCATTTCCCAATTCGTTAAGGCATCTTCAGTGGGACAATTTTCCTTTAAAGTCTTTACCATTGTCATTTTGTGCCGAGAAGCTAGTTGAACTTCGGATGCCTGGTAGCTGCCTTCAAAAACTATGGGATGGCAAGCAGGACTTGGTGAATTTAAGGAATATAGACCTTGCGGGATCTAAAAAATTGATAGAGTTGCCAGATTTGTCAACAGCTACAGCACTTAAAGAGGTTATTCTTTATGGGTGTGAAAGTTTATGCCATCTTCATTCATCCATTTTATCTCTTCCGAGATTGAGGTATGTGAATCTTATGTTTTGCAAGAACCTAAAGAGTTTGAAAACAGAGAGTCAATCAAAATCGCTCTCACAACTAGATGTTAGGTATTGCTATGGTCTCCAGGAATTTTCATTCTCTTCAGACCAACTAACTTCTTTAGATTTATTGGGCTTGCAAATCAAGAATTTAGACTTTTCAATTGGGCGTATGGAGAAACTTCAGAGTCTCTCTCTTAGCGGTTTCAATCTAAAGAATCGTCAAATTAAAGACATTTGTTGCATGAGATCTCTTGAGGAGCTTCGTCTTTGGAATTGCAAGGGAATAATTGGCAAATCAAAGCTCCATAGCTTATTTGATGCTTTGAGATCTCTAAAATCACTTTCTTTGCAATGGACATCCACATTAACTGAACTTCCAAACAATATCAAGCATCTCTCGAGGCTACAATCTCTTGATGTAAGCTATTGCAGGGACCTTCAATCTTTACCGGAGCTTCCTCCATCCATTGAAGAATTATGCGCCTACCGATGCACATCATTAAAGACGCTGCAGTTCACTTCTCATACAGAATCTCCCTTGTTGGTAGATGAAATAATTTTGGGTTCAAGTTCAACGCTCCGTTCCTCAGTTAGTTATCTCCAAAATCTTCGAGAGCTTACTCTTGTTGGTTGTAAGCAGTTGTATGAACTCCCTGAAAACATTGGCTCCTTGTCTTCATTGTCTTCATTGTATCTGAGTGTAAGTAGTGTAGAGAGCTTGCCTGCCAATATCAAGTATCTTTCAAATCTAGAAACAATATACTTGGTCAATTGTACAAAACTTCGTTCTCTGCCAGAACTGCCGCCATCCATCGAAACCGTCTTCGCTCATGGTTGCATATCATTGGAGACTGTAGCAATTTCGATACCTTTTGCACCACAATTAGGGTCCCTATTTCTGTTAGATTGCTTGAAATTGGAGAACTGCTTTTTGTCTCATGTTAAGGAAAGTGCTTATTTCTCATTGAATCGATTAGCGTACACACAACAAATAGGTGGTGTCTGTTACCCTGGAAGAAAAGTTCCAAAGTGGTTTGGATCTAATCAGAGAACAGAGGCTTCCAACTATATAACTATTGAATCTCCTTCAACCACAAACGACCTAATCGGCTTCGTTTTTTGCTCTATTCTTTCTCAGCATCCCTCTCACGCTGACTTGCAATGCCAACTTTATTATGATGGTAAGCAGTGCAAATGCTCTAAGTTTGAATTTTACAGAGGTGAAAATTCGGAATCACATCATGTTTTTCTATGGTGTGAACCTCACCCATTCATAAACTTCCATAAAGCAATGGACAACCAAAATGCTAATTACAAGCCAAAGTTGTCATTTGAATTCTTTGTTGATAGATTTGGAAAGAAGCATGTTGATTGTATGATTGAAGCATGTGGAGTCTGCCCAATATATGCCTCCAAATATCACGACTTCATTCAACGAATGGGACGGGAGCCAAACTTGGGTGCCCAAAAAGAGTCCTGTCATTATGCTGATGAGAATTCATTTCATGAAATGATCCAATATGTTAGATTCGCATTGAAGCAAGGAGAATGTGGCAATTTTGGAGGAAGTACTATTCCAGAGTGGTTTACTTACAAAAATTCAGTGACAAAGTATGGAGATTTGCGTGTGAGTGTTCAGCTTGCTCCAGATTTTGAAAACTTAATTGGTTTCATTTTCTGCTTTGTCATACCTCATTTCTCCTCAAAAGAAAGGGATCAATGTCACTCATCATGTCAATGCACCTGGCATGACGTGGAAAATTCTCTCTTCTTTTTGCAAGGTCCAACAGGATGGCACTATTCAATGGAAAAATTGAATTCATATGATAAAGTGTTTCTATGGTATGATCCCCTCTATTGTGAACGCATACTACACAAACAGCGAAGAAAGGGAAAAGGTTATAATGAGGAGCTTGAATTTAAATTTAAGTTTGTTGATGTCGACGCCAAAGAATGGGGGTCTTATAGCTTGATCAAAGAATGTGGAGTTCGGCCAATATATGTCTCAGAGTACACAAACTTCCTCCAACAGAAGAAATTGGAGGTAAGCATGCCAAAAAGGAGGCATCAAAATATTGATGATGACCAATATCAACTCCCTTCAACAAAGAAATTGAAGGACTCATAG 4002 0.3936 MFAIASPSSSSSSRKYDVFLSFRGEDTRRSFTSHLHTALCLRDIEIYIDYKLPKGNDISQSLIEAIQDSSISVVVFSQNYASSKWCLNELLQILRCKQQQAQIVVPIFYEIDPSHVRKQRGAYEKAFAEHLEKNPEKVEEWRQALFEIANVAGWDSCNYRDEAELIQNIVNDVINKLNHGYSGSVLENIVGIDENLDHIESLLEECSTIGIWGMGGIGKTTMAKAVFTKLRSQFDSCCFLKNFTEKYEKHGLEYVRDELFRELSKNTSLGRLNRRRVLIVLDDVSNTKQLDELKSEAPPLGPGSKVIITSRDKHVLHGRVDKIHEAKELSYRNSLELFNVKAFHKDGYEREYEELVKRALAYAKGIPLALTVLGSLLHSRPVDQWESALRKLGRMANEDIQEVLKLSYDGLDDEVKEIFLDIACFSKGQSGQYVEAMPPEIFGFGASIGLGILVDRALISLSHGAGSDAIQGINLDLSQITELQLSADSFGKITNLRLLKLYYSSFHRRSCVVNLPSGLESFPNSLRHLQWDNFPLKSLPLSFCAEKLVELRMPGSCLQKLWDGKQDLVNLRNIDLAGSKKLIELPDLSTATALKEVILYGCESLCHLHSSILSLPRLRYVNLMFCKNLKSLKTESQSKSLSQLDVRYCYGLQEFSFSSDQLTSLDLLGLQIKNLDFSIGRMEKLQSLSLSGFNLKNRQIKDICCMRSLEELRLWNCKGIIGKSKLHSLFDALRSLKSLSLQWTSTLTELPNNIKHLSRLQSLDVSYCRDLQSLPELPPSIEELCAYRCTSLKTLQFTSHTESPLLVDEIILGSSSTLRSSVSYLQNLRELTLVGCKQLYELPENIGSLSSLSSLYLSVSSVESLPANIKYLSNLETIYLVNCTKLRSLPELPPSIETVFAHGCISLETVAISIPFAPQLGSLFLLDCLKLENCFLSHVKESAYFSLNRLAYTQQIGGVCYPGRKVPKWFGSNQRTEASNYITIESPSTTNDLIGFVFCSILSQHPSHADLQCQLYYDGKQCKCSKFEFYRGENSESHHVFLWCEPHPFINFHKAMDNQNANYKPKLSFEFFVDRFGKKHVDCMIEACGVCPIYASKYHDFIQRMGREPNLGAQKESCHYADENSFHEMIQYVRFALKQGECGNFGGSTIPEWFTYKNSVTKYGDLRVSVQLAPDFENLIGFIFCFVIPHFSSKERDQCHSSCQCTWHDVENSLFFLQGPTGWHYSMEKLNSYDKVFLWYDPLYCERILHKQRRKGKGYNEELEFKFKFVDVDAKEWGSYSLIKECGVRPIYVSEYTNFLQQKKLEVSMPKRRHQNIDDDQYQLPSTKKLKDS 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5573g00005 1333 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Pral5573g00005 1333 Gene3D - 9 178 IPR035897 -
Pral5573g00005 1333 Pfam Leucine Rich Repeat 547 566 IPR011713 -
Pral5573g00005 1333 Pfam NB-ARC domain 201 409 IPR002182 GO:0043531
Pral5573g00005 1333 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 179 - -
Pral5573g00005 1333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 422 IPR027417 -
Pral5573g00005 1333 Pfam C-JID domain 961 1096 IPR045344 -
Pral5573g00005 1333 Pfam C-JID domain 1146 1295 IPR045344 -
Pral5573g00005 1333 SUPERFAMILY "Winged helix" DNA-binding domain 399 471 IPR036390 -
Pral5573g00005 1333 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral5573g00005 1333 Gene3D - 179 324 IPR027417 -
Pral5573g00005 1333 Gene3D - 328 412 IPR042197 -
Pral5573g00005 1333 PRINTS Disease resistance protein signature 363 377 - -
Pral5573g00005 1333 PRINTS Disease resistance protein signature 208 223 - -
Pral5573g00005 1333 PRINTS Disease resistance protein signature 271 285 - -
Pral5573g00005 1333 PRINTS Disease resistance protein signature 755 771 - -
Pral5573g00005 1333 Gene3D Ribonuclease Inhibitor 466 637 IPR032675 -
Pral5573g00005 1333 Gene3D Ribonuclease Inhibitor 812 956 IPR032675 -
Pral5573g00005 1333 MobiDBLite consensus disorder prediction 1311 1333 - -
Pral5573g00005 1333 SMART till_3 15 151 IPR000157 GO:0007165
Pral5573g00005 1333 Gene3D Ribonuclease Inhibitor 638 803 IPR032675 -
Pral5573g00005 1333 Pfam TIR domain 15 182 IPR000157 GO:0007165
Pral5573g00005 1333 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 654 IPR044974 GO:0006952
Pral5573g00005 1333 SUPERFAMILY L domain-like 473 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5573g00005 Pral-Chr5573 34533 41102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5573g00005 682 882 WRKY Transcription Factor Family AT4G12020 26.961 1.28e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5573g00005 - - pcin:129289344 1113.6