Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5570g00002 ATGGTGATCGTGAAACTTGGGAACAAGAAAAACCAGGAGAAGCAAGGACAGGGAATGCGACTTGGGAAATACGAGCTTGGTAGGACTCTTGGAGAAGGCAATTTCGGAAAAGTCAAATTAGCTAGGAATACCGATTCCGGCCAACCCTTCGCGGTTAAGATCCTCGAGAAGAGAAAGATCCTTGATCTCAATATAACCAATCAGATTAAGAGGGAGATCGCCACCTTGAAGCTCTTAAAGCATCCGAACGTGGTCAGATTACACGAGGTCTTGGCTAGCAAGACCAAGATTTATATGGTCCTGGAGTACGTGACTGGAGGAGAATTGTTTGACAGAATTGCATCTAAAGGCAAACTTCCAGAGGCTGACGGAAGGAAGCTTTTCCAGCAGTTGATTGACGGTGTTAGCTACTGTCATGATAAAGGGGTCTTCCACAGAGATCTCAAGCTGGAGAATGTACTTGTAGATGCCAAAGGCAACATAAAGATAACCGATTTTGGCCTAAGTGCTTTACCCCAGCATTTTAGAGCAGATGGTTTGCTGCATACCACCTGCGGAAGTCCCAACTATGTGGCCCCTGAGATTCTTTCTAATAAAGGATATGATGGCGCAACATCAGATACATGGTCCTGTGGGGTCATCTTGTATGTTATCTTAACAGGATATCTTCCGTTTGATGATAGGAATCTTGCAGTTCTCTACCAAAGGATTCTTAAAGGGGATGTTCAGATACCAAAATGGCTATCGCCTGGTGCAAAAAACATGATAAAGAGGATTCTTGATCCCAACCCTGCTACTCGGATAACAATGGCTGGCATCAAACAAGATGAATGGTTCAAGCAGGGCTATATTCCAGCAAAGCCAGAGGATGAGGAAGAGGGCGTATATATTGATGACGAAGCCTTTTCCATCCACGAAGTGGCTCACGAAACAGAAGATAAGAGTCCTGGATCACCAACCCTTATCAATGCATTTCAACTGATAGGGATGTCTTCATGCCTTGACCTCTCTGGCTTCTTCGAAAAAGAGGATGTCTCAGAGAGGAAGATAAGATTTACGTCCAACCTCTCGGCAAAAGAATTGATCGAGAGGCTTGAGGACATTGTGACAGCAATGGGATTTACCGTCCAAAAGAAAAATGGAAAAGTGAAAGTGATACAAGAGAACAAGGCGCGTAAAAGTTTAGGCAATCTCACTGTTGCAGCAGAGGTTTTCGAGATAAGCCCATCCTTGTATGTAGTAGAGTTAAGGAAATCCTATGGAGATTCTTCTGTATATAGACAGTTGTGCGAGAAGTTATCAAATGATTTGGGGGTTCCGCCAAGGACCGGAGCGCTCGTAAGTGGATAG 1350 0.443 MVIVKLGNKKNQEKQGQGMRLGKYELGRTLGEGNFGKVKLARNTDSGQPFAVKILEKRKILDLNITNQIKREIATLKLLKHPNVVRLHEVLASKTKIYMVLEYVTGGELFDRIASKGKLPEADGRKLFQQLIDGVSYCHDKGVFHRDLKLENVLVDAKGNIKITDFGLSALPQHFRADGLLHTTCGSPNYVAPEILSNKGYDGATSDTWSCGVILYVILTGYLPFDDRNLAVLYQRILKGDVQIPKWLSPGAKNMIKRILDPNPATRITMAGIKQDEWFKQGYIPAKPEDEEEGVYIDDEAFSIHEVAHETEDKSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKELIERLEDIVTAMGFTVQKKNGKVKVIQENKARKSLGNLTVAAEVFEISPSLYVVELRKSYGDSSVYRQLCEKLSNDLGVPPRTGALVSG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5570g00002 449 Gene3D Kinase associated domain 1, KA1 324 439 - -
Pral5570g00002 449 Gene3D Transferase(Phosphotransferase) domain 1 16 323 - -
Pral5570g00002 449 FunFam Non-specific serine/threonine protein kinase 17 319 - -
Pral5570g00002 449 FunFam Non-specific serine/threonine protein kinase 319 440 - -
Pral5570g00002 449 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Pral5570g00002 449 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Pral5570g00002 449 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Pral5570g00002 449 SUPERFAMILY Protein kinase-like (PK-like) 21 312 IPR011009 -
Pral5570g00002 449 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5570g00002 449 CDD CIPK_C 323 434 - -
Pral5570g00002 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Pral5570g00002 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 422 - -
Pral5570g00002 449 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5570g00002 449 CDD STKc_SnRK3 23 278 - -
Pral5570g00002 449 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5570g00002 449 Pfam NAF domain 319 378 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5570g00002 Pral-Chr5570 8210 13975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5570g00002 87 438 CBL-interacting serine-threonine protein kinases AT3G17510 73.654 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral5570g00002 Pkinase 2.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5570g00002 K07198 - qsa:O6P43_003749 739.184