Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5569g00002 ATGCTGGTCCCTCCATGGCTTGAACCGCTTCTGAACGCATCGTTTTTCAGCGTTTGCCGGATTCACGGAGACGCCGCCAGGAGCGAGTGTAACATGTATTGTCTCGATTGCAATGGCGACCCGTTTTGCTTTTACTGCCGTTCTTCAAGGCACAAGGATCATCAAGTTATCCAGATAAGAAGATCTTCGTATCACGATGTGGTGAGAGTTGCAGAAATCCAGAAGGTCCTGGACATAAGTGGAGTACAGACGTATGTGATAAACAGTGCGAGAGTGCTGTTTCTGAATGAGAGGCCTCAGCCAAAAACATCATCTGGGAAAGGAGGGGGAGCTCACATTTGCGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGTTTTTGTTCTTTGGGATGTAAGCTTGAAGGAATAAAGAGGAATGGGAATGCGAACTTTGGTTTGGGATCAGTGTCTTCCAGACAAGAAGAAGAATTGCGTGAAGGGTCACAACAAGATATGTATCCGGCCACGCCTCCTCCTCCACCTGCTTCATCTGCAAGAAGAAGAAAAGGAATTCCTCATAGAGCTCCTTTTGCTTCCTAG 582 0.4725 MLVPPWLEPLLNASFFSVCRIHGDAARSECNMYCLDCNGDPFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKTSSGKGGGAHICEICGRSLLDPFRFCSLGCKLEGIKRNGNANFGLGSVSSRQEEELREGSQQDMYPATPPPPPASSARRRKGIPHRAPFAS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5569g00002 193 Gene3D Classic Zinc Finger 17 62 - -
Pral5569g00002 193 MobiDBLite consensus disorder prediction 145 193 - -
Pral5569g00002 193 Pfam PLATZ transcription factor 60 134 IPR006734 -
Pral5569g00002 193 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 191 - -
Pral5569g00002 193 SUPERFAMILY B-box zinc-binding domain 18 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5569g00002 Pral-Chr5569 7925 9843 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pral5569g00002 PLATZ 3.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5569g00002 - - gmx:100809455 323.553