Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5568g00040 ATGAAGTTACATTCAGTTCGGCATCTGCTGGAACCAATTTTAGAGCCCTTGATTCGCCGAGTGGTTAAGGAGGAAGTTGAAATGGCCTTGAGGAGACATTTAGCCAACCTGAAACGGACATGTGGGAAGGAAATGCATGCTTTCGAATCAAGAAACTTGCAGCTGCAATTTGAAAACAACATATGCCTTCCTGTCTTTACTGGAGCTCGAATTGAAGGAGAGGATGGATCCAACTTAAAGGTGTGTTTGGTTGATTCTGAGAAGGGCGAAGTTGTTAGTTCAGGACCTGAATCCTCAGCTAAGGTGGAAATTGTAGTCCTTGAAGGTGATTTTGAAGATGAAAGTGACTTGTGGTTGTCAGAAGATTTCAAAAGCAACATTGTAAGAGAAAGAGAAGGAAAAAAGGCCCTTCTTATGGGAGATGTAGTTTTGCATCTTAAAGACGGGATTGGCATAGTGGGGGAAATTTCGTTCACAGATAATTCAAGTTGGACTAGGAGCCGTAGGTTTAGGCTTGGGGTAAGAGCCGTTGACAACTTTGATGGAGTCAGAATAAGAGAAGCAAAGACTGAGTCATTTATTGTCAGAGATCATCGAGGAGAATTGTACAAGAAACACCACCCTCCAAATTTGTTTGATGAAGTTTGGAGATTGGAAAAGATTGGAAAGGACGGAGCTTTTCACAGGCGTTTGTGCAGAGAAAAGATCAATACAGTGAAGGATTTTCTCACACTCCTCAATCTAGATCCGACAAAGCTACGCAGTATACTAGGCACTGGTATGTCTGCAAAAATGTGGGAAGTAACAGTGGAGCATGCTAAAAAATGTGTTCTTGATAGCAGGAGATACTTGTACTTCCCTTCTGATTCTCAGAATAAAACTGGTATTGTCTTCAATGCTGTGGGACAACTGACAGGGATTCTCTCTGAAGGGCAGTATGTCACTATAGATAAGCTGTCTGAAGCAGAAAAGGTTGAATTTCAGTTGTCTGTAATTTCTGCGTATAAGCAAGGGGATAGCGTAGCTGCTTTTGAGGATGAAGCTTCTCTTATAGATAACTCTTCGCACTTGACAAATGCAATTTACTCCCCAAGCTCACTTAAGACCGAGGGATCCAGCGCCAATAAGGCTTTGGCTCCTCAAAAAAGTGGTGGATTTGATTACACACAAGCAAGTACCTCGTCTCCAGATATCATGTCATCTTTATATTCTGTTGGTGGGACCAGTAGTTTTGATGACTATGGCTTAGCCAGTTTTGAAAGCCTGGGGCTTAGATATGATCAAGCTCATGGTTTTCCAGTCCAAGTCACTACCTCTTTAATGACTGAAACAGACCCTATGGCACACCCTTTCGGAGATGATATGCAATTCTTTGATCCTACTGATCTTCAGTCTCATTGTAATATTCTGGATTCACAGGCAGATTTGCAGAGTGCTGTTGATGGCTTTATGCTTGCTCGTTCCACAGCCTTGGCCATGGGTAAAGCTCAAAGGCGATGGAGAAAACTGTTCAACGTCCTGAAATGGTTCATGGTGAGTAGCATCAATTCAAAAAGAAATCGAGTTGGACATAATGAAAGACACATTAAAGAGTTGTGA 1599 0.4209 MKLHSVRHLLEPILEPLIRRVVKEEVEMALRRHLANLKRTCGKEMHAFESRNLQLQFENNICLPVFTGARIEGEDGSNLKVCLVDSEKGEVVSSGPESSAKVEIVVLEGDFEDESDLWLSEDFKSNIVREREGKKALLMGDVVLHLKDGIGIVGEISFTDNSSWTRSRRFRLGVRAVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPNLFDEVWRLEKIGKDGAFHRRLCREKINTVKDFLTLLNLDPTKLRSILGTGMSAKMWEVTVEHAKKCVLDSRRYLYFPSDSQNKTGIVFNAVGQLTGILSEGQYVTIDKLSEAEKVEFQLSVISAYKQGDSVAAFEDEASLIDNSSHLTNAIYSPSSLKTEGSSANKALAPQKSGGFDYTQASTSSPDIMSSLYSVGGTSSFDDYGLASFESLGLRYDQAHGFPVQVTTSLMTETDPMAHPFGDDMQFFDPTDLQSHCNILDSQADLQSAVDGFMLARSTALAMGKAQRRWRKLFNVLKWFMVSSINSKRNRVGHNERHIKEL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5568g00040 532 Pfam Calmodulin binding protein central domain 211 276 IPR046830 -
Pral5568g00040 532 Coils Coil 529 532 - -
Pral5568g00040 532 Pfam Calmodulin binding protein C-terminal domain 282 342 IPR046829 -
Pral5568g00040 532 PANTHER OS02G0177800 PROTEIN 5 397 IPR012416 GO:0005516
Pral5568g00040 532 Pfam Calmodulin binding protein-like N-terminal domain 53 198 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5568g00040 Pral-Chr5568 214049 217787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5568g00040 1 324 Calmodulin-binding Proteins AT5G62570 65.432 2.85e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5568g00040 - - pcin:129319446 990.334