Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5568g00039 ATGTTGCTTCTTTCCCCTGCGACCTTACACCACCCTTCTTCTTCTTCTTCCTCCTCCTCCTCCCTGCGCTGCTCTAATTCCTTCATGTCGAACAAGAGGCGTCCCGATGATGGCAAGCCAAAATCCGAGAGTGGCAGTCCCGAGGATAAGCGAAGAAAGGTTCCTGCTTTTACCAATGTGGTTCGTGAGGTGATGAAGTTACATTCAGTTCGGCATCTGCTGGAACCAATTTTAGAGCCCTTGATTCGCCGAGTGGTTAAGGAGGAAGTTGAAATGGCCTTGAGGAGACATTTAGCCAACCTGAAACGGACATGTGGGAAGGAAATGCATGCTTTCGAATCAAGAAACTTGCAGCTGCAATTTGAAAACAACATATGCCTTCCTGTCTTTACTGGAGCTCGAATTGAAGGAGAGGATGGATCCAACTTAAAGGTGTGTTTGGTTGATTCTGAGAAGGGCGAAGTTGTTAGTTCAGGACCTGAATCCTCAGCTAAGGTGGAAATTGTAGTCCTTGAAGGTGATTTTGAAGATGAAAGTGACTTGTGGTTGTCAGAAGATTTCAAAAGCAACATTGTAAGAGAAAGAGAAGGAAAAAAGGCCCTTCTTATGGGAGATGTAGTTTTGCATCTTAAAGACGGGATTGGCATAGTGGGGGAAATTTCGTTCACAGATAATTCAAGTTGGACTAGGAGCCGTAGGTTTAGGCTTGGGGTAAGAGCCGTTGACAACTTTGATGGAGTCAGAATAAGAGAAGCAAAGACTGAGTCATTTATTGTCAGAGATCATCGAGGAGAATTGTACAAGAAACACCACCCTCCAAATTTGTTTGATGAAGTTTGGAGATTGGAAAAGATTGGAAAGGACGGAGCTTTTCACAGGCGTTTGTGCAGAGAAAAGATCAATACAGTGAAGGATTTTCTCACACTCCTCAATCTAGATCCGACAAAGCTACGCAGTATACTAGGCACTGGTATGTCTGCAAAAATGTGGGAAGTAACAGTGGAGCATGCTAAAAAATGTGTTCTTGATAGCAGGAGATACTTGTACTTCCCTTCTGATTCTCAGAATAAAACTGGTATTGTCTTCAATGCTGTGGGACAACTGACAGGGATTCTCTCTGAAGGGCAGTATGTCACTATAGATAAGCTGTCTGAAGCAGAAAAGGTTGAATTTCAGTTGTCTGTAATTTCTGCGTATAAGCAAGGGGATAGCGTAGCTGCTTTTGAGGATGAAGCTTCTCTTATAGATAACTCTTCGCACTTGACAAATGCAATTTACTCCCCAAGCTCACTTAAGACCGAGGGATCCAGCGCCAATAAGGCTTTGGCTCCTCAAAAAAGTGGTGGATTTGATTACACACAAGCAAGTACCTCGTCTCCAGATATCATGTCATCTTTATATTCTGTTGGTGGGACCAGTAGTTTTGATGACTATGGCTTAGCCAGTTTTGAAAGCCTGGGGCTTAGATATGATCAAGCTCATGGTTTTCCAGTCCAAGTCACTACCTCTTTAATGACTGAAACAGACCCTATGGCACACCCTTTCGGAGATGATATGCAATTCTTTGATCCTACTGATCTTCAGTCTCATTGTAATATTCTGGATTCACAGGCAGATTTGCAGAGTGCTGTTGATGGCTTTATGCTTGCTCGTTCCACAGCCTTGGCCATGGGTAAAGCTCAAAGGCGATGGAGAAAACTGTTCAACGTCCTGAAATGGTTCATGGTGAGTAGCATCAATTCAAAAAGAAATCGAGTTGGACATAATGAAAGACACATTAAAGAGTTGTGA 1791 0.4316 MLLLSPATLHHPSSSSSSSSSLRCSNSFMSNKRRPDDGKPKSESGSPEDKRRKVPAFTNVVREVMKLHSVRHLLEPILEPLIRRVVKEEVEMALRRHLANLKRTCGKEMHAFESRNLQLQFENNICLPVFTGARIEGEDGSNLKVCLVDSEKGEVVSSGPESSAKVEIVVLEGDFEDESDLWLSEDFKSNIVREREGKKALLMGDVVLHLKDGIGIVGEISFTDNSSWTRSRRFRLGVRAVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPNLFDEVWRLEKIGKDGAFHRRLCREKINTVKDFLTLLNLDPTKLRSILGTGMSAKMWEVTVEHAKKCVLDSRRYLYFPSDSQNKTGIVFNAVGQLTGILSEGQYVTIDKLSEAEKVEFQLSVISAYKQGDSVAAFEDEASLIDNSSHLTNAIYSPSSLKTEGSSANKALAPQKSGGFDYTQASTSSPDIMSSLYSVGGTSSFDDYGLASFESLGLRYDQAHGFPVQVTTSLMTETDPMAHPFGDDMQFFDPTDLQSHCNILDSQADLQSAVDGFMLARSTALAMGKAQRRWRKLFNVLKWFMVSSINSKRNRVGHNERHIKEL 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5568g00039 596 Pfam Calmodulin binding protein central domain 275 340 IPR046830 -
Pral5568g00039 596 MobiDBLite consensus disorder prediction 30 54 - -
Pral5568g00039 596 MobiDBLite consensus disorder prediction 1 54 - -
Pral5568g00039 596 Pfam Calmodulin binding protein C-terminal domain 346 406 IPR046829 -
Pral5568g00039 596 PANTHER OS02G0177800 PROTEIN 32 461 IPR012416 GO:0005516
Pral5568g00039 596 Pfam Calmodulin binding protein-like N-terminal domain 117 262 IPR046831 -
Pral5568g00039 596 MobiDBLite consensus disorder prediction 8 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5568g00039 Pral-Chr5568 214049 218176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5568g00039 29 388 Calmodulin-binding Proteins AT5G62570 64.167 1.80e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5568g00039 - - pcin:129319446 1068.14