Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5568g00029 ATGGGGTTCAAGCACTTGTTGTTGGAATCGATTCCATTTGTAGCCATGGTGATGGTGGAGTGCTTGGATGTGGGAATGACCACATTAAGTAAAGCAGCCATGTCCAGAGGAATGAGCCACTTCGTCTTCGTCGTCTACTCAAACGCTCTTGCCTCTGCCATACTCCTCCCTTCTTCTTTCATCTTCAGCAGAAAAAATAGGCCTCCACTTTCTCTCTCGCTTCTTTGCAAATTCTTCCTCCTCAGTCTTGTTGGGATAACTGTGATGCAGAATTGTGTTTTCACTGGTATAAGCTACAGCTCGCCCACTCTTGGATCTGCTATGAGCAACTTGGTTCCAGCGTTCACTTTTGTGCTCGCTGTCATCTTCAGGATGGAGAAGTTAGATATTAGAAGCACAAAGAGCCAGATGAAAATCTTGGGCACGCTGGTGTCCATCTCAGGAGCATTAATCGTGACCCTTTACAAGGGAGCTTCCATCGGCAAATCTCCAAATGATTCCCCTGAAAATCCTTCTCAATCCTTGTTGGAGCAAACAAACAACTGGGTGATTGGGGGTCTCTTCCTCGCAACAGCTGGTTTATCTCTTGCAGTCTGGAGCATTTCTCAGGCGGCAATTCTGAGAGGATATCCATCTGAGCTGACCATTGTGGCCTTTTATTGCCTCTTTGGAACAATCCAATGCAGCATACTCTCTCTAATAGTAGTCAGAGATCCCAATGCATGGACACTTGGACCTGACATTGAACTTATCTCCATTATCTATTCAGCGATTTTTGGGAGTGTGGTGACATTTTCTGTGCTGACATGGTGCATCCACAAGAAAGGACCTGTATTTGTGGCCCTGTTCAAGCCTGTGGGGATTGCAATTGCTGCATTGATGGGTGTGGCCTTCCTTGGGGACACACTCTACGTTGGCAGCATTATTGGAGCCGTAATAATTGTGATCGGATTCTACACAGTATTGTGGGCACAATCCAAAGAGGAAAATCAGAAGTCAAATAAAGTTCACAAGCAACTATCCCCATCGTCATCACAAAGGAGACCTCTGCTAGAAAGTCATCTTGATGAAGCAAATATTTTAGCATAA 1089 0.4527 MGFKHLLLESIPFVAMVMVECLDVGMTTLSKAAMSRGMSHFVFVVYSNALASAILLPSSFIFSRKNRPPLSLSLLCKFFLLSLVGITVMQNCVFTGISYSSPTLGSAMSNLVPAFTFVLAVIFRMEKLDIRSTKSQMKILGTLVSISGALIVTLYKGASIGKSPNDSPENPSQSLLEQTNNWVIGGLFLATAGLSLAVWSISQAAILRGYPSELTIVAFYCLFGTIQCSILSLIVVRDPNAWTLGPDIELISIIYSAIFGSVVTFSVLTWCIHKKGPVFVALFKPVGIAIAALMGVAFLGDTLYVGSIIGAVIIVIGFYTVLWAQSKEENQKSNKVHKQLSPSSSQRRPLLESHLDEANILA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5568g00029 362 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Pral5568g00029 362 Pfam EamA-like transporter family 25 153 IPR000620 GO:0016020
Pral5568g00029 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 327 - -
Pral5568g00029 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 156 - -
Pral5568g00029 362 PANTHER WAT1-RELATED PROTEIN 12 333 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5568g00029 Pral-Chr5568 177827 179946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5568g00029 1 360 Nodulin-like Gene Family AT3G28050 46.032 5.56e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5568g00029 - - qsa:O6P43_030898 497.278