Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5568g00022 ATGGTGCTCAAAGCATACATTAATCTATTTGACTTCATCAGAGGAGTCAATTCAAGTTCCCCTCAATCTTCTAGAGCTCTACCGGGAGCTATGAATGATCCAGGGATTATGTCTAATGATGATCATGATCCATATGATTCCTCATCAGAAGACAAGCAAAGGATAATCATAGTAGCAAATTTTCTTCCCCTAAATGCCCAGCAGGATAATTCTGGCCGGTGGTGCTTTGGTTTCGATGAAGATTCTATTTTATTGCAACTAAAGGATAGTATCTCTCATGATACTGATGTTTTTTATGTTGGATCTCTAACTATTGATGTTGAAGAAAGCAAACAAGAGCAGGTTTCTCTTGAGTTGCTGGAGGAATTCAAGTGCTTGCCTATATTTATTCCTTCAGATATCCGCAAAATGTATTATAATGGATTCTGCAAGCAGTATTTATGGCCTCTATTCCATTACATGATGCCTATGAATCCGGCTTACGGCAGTCACTTTGATGCGTTACTTTGGAGGGCTTATGTTGCTGTTAATGTAAAATTCACAGATAAGGTCATAGAAGTTATTAATAATCCAGGAAAAGATTATGTCTGGATTCATGATTATCATCTTATGGCCCTGCCAATGCTTCTGCGCAGGCGGTACTATCGTTTCAAACTAGGATTTTTCCTCCACAGTCCTTTTCCTCCTTTGGAAATTTATATGACTCAGCCTATTGGAGTGCATATTTTGAAAGCTCTGCTTAATTCAGATTTAATAGGCTTTCAAACATACGAATATGCTCGCCACTTTTTGTCTTGCTGCAGTCAGATGCTCGGCTTGGAATATGAATACAAAAGGGGTTACATTGAGATTGAATACTCTGGCCGAAAGGTGAACATTAAAGTTTTGCCTGCAGGGATTCATATGGGCCGACTTCATTCTTCCTTGAATCACCCATCTTCGTCCACCAAAGTCAGAGAAATCCGTGAGCAATTTAAGGGGAAAACACTCATTCTTGGTGTTGATGATATGGACATATTCAAAGGCATTGGTCTAAAGCTCTTGGCCATAGAACAACTCCTACAGAAGAGGCCATCTTTGCAAGGTGAATTAGTTGTTGTCCAAATTGTGAACCCCCCAAGGAGAACTGGCAGAGATATTGAGGAAGCAAAGAAAGAGACATACCTTGTTGCTGAAAGGATAAATGAAAGGTTTGGTTTTGCAGGTTACAAACCTGTCATTATCATTGACCATCCTACTCCTTTTTATGAGAAGGCCGCTTATTATGCTTTGGCAGAATGTTGCTTTGTGAATGCAGTAAGGGATGGTATGAATTTGGTTCCTTACATGTATATTGCCTATAGGCAGGGGACCCCAGAGATGGATGAAGTATTAGAAATCGATTCTGAGTCGCTTCATACAAGTGCACTTGTCATTTCTGAGTTCATAGGCTGCTCACCATCTCTTAGTGGGGCTTTTAGGGTGAACCCTTGGGACATAGATGCTGTGTCTGAAGCACTAAGTTCAGCCATCGACATGCCCATTACACAAAAACACTTGAGGCATGAGATACACTTCAGGCATGTTAGCTCTCATGATGTGGCTTACTGGGCTAGAAATTTTATGCAAGATCTTGAGCGTTCATGCATGCATCACCATGCTAACCATTGCTTGGGCCTTGGATTAAGTTTTGGTTTCAGAGTCACGTCCTTTCCTCTGAATTTCAGGAAGCTATCCATCGAGCATGTTGTCTCTGCATATGAAGAGACTAAGGGTAGGGCAATATTTTTGGACTATGATGGTACAATTGTTCCCCAAACTTCCATTGTGCAAAGCCCTAGTCCTGAACTCATATCTGTTATCAATGACCTCTGCAATGACCCGCTGAACACCGTGTTTATAGTAAGTGGCAGGGGTAAGACCCAACTAAGTGATTGGTTCGATTCATGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGATGGGATAAAAATTCAAGCTGGGAAACCAGTGATTTAGTCGCTGATTTTTCTTGGAAAAGCGTTGTTGAACCTGAAATGAGATCATATTCTGAATTAACCGGCAGCTCCTATATGGAGAGCAAGGAGAGCGGCTTGGTATGGCATTATCATGAAGATGATTCTTTTGGCTCTGATTATGGAAATTTTGAAGCCAAGGAGCTGTTGGATCACCTTGAAGGTGTTCTTGCAAATGAGCCAGCAGTTGTTCAAAAGGGACGTGATATTGTTGAAGTCAAGCCACAGGGAATTACTAAAGGCTTAGTCATAGAAAAAGTTCTTTCTAATCTAAAGATGAATGGGATGTCAGTGGATTTCGTGCTGTGCATTGGAGACGATGGATCAGATGAGGATATGTTTGCAAGCTTATCAAGCCAAGCTCATCATGGAGTGCTATCTCCAGAAGCAGACATCTTTACATGCACAGTTGAAGTAAAATCAAGCAAAGCCATGTACTTCTTAAATGATCCTACTGAAGTGATGAGGCTGCTACAAGCCCTTGCTGCTTCTGGGTCTGAATCAAAGAAGCTGATGAGAGAAAATATCCCTTCTAGAAGAAGCGAAGTTCGATTGGAAGGAGATGCTTGA 2595 0.4104 MVLKAYINLFDFIRGVNSSSPQSSRALPGAMNDPGIMSNDDHDPYDSSSEDKQRIIIVANFLPLNAQQDNSGRWCFGFDEDSILLQLKDSISHDTDVFYVGSLTIDVEESKQEQVSLELLEEFKCLPIFIPSDIRKMYYNGFCKQYLWPLFHYMMPMNPAYGSHFDALLWRAYVAVNVKFTDKVIEVINNPGKDYVWIHDYHLMALPMLLRRRYYRFKLGFFLHSPFPPLEIYMTQPIGVHILKALLNSDLIGFQTYEYARHFLSCCSQMLGLEYEYKRGYIEIEYSGRKVNIKVLPAGIHMGRLHSSLNHPSSSTKVREIREQFKGKTLILGVDDMDIFKGIGLKLLAIEQLLQKRPSLQGELVVVQIVNPPRRTGRDIEEAKKETYLVAERINERFGFAGYKPVIIIDHPTPFYEKAAYYALAECCFVNAVRDGMNLVPYMYIAYRQGTPEMDEVLEIDSESLHTSALVISEFIGCSPSLSGAFRVNPWDIDAVSEALSSAIDMPITQKHLRHEIHFRHVSSHDVAYWARNFMQDLERSCMHHHANHCLGLGLSFGFRVTSFPLNFRKLSIEHVVSAYEETKGRAIFLDYDGTIVPQTSIVQSPSPELISVINDLCNDPLNTVFIVSGRGKTQLSDWFDSCENLGIAAEHGYFIRWDKNSSWETSDLVADFSWKSVVEPEMRSYSELTGSSYMESKESGLVWHYHEDDSFGSDYGNFEAKELLDHLEGVLANEPAVVQKGRDIVEVKPQGITKGLVIEKVLSNLKMNGMSVDFVLCIGDDGSDEDMFASLSSQAHHGVLSPEADIFTCTVEVKSSKAMYFLNDPTEVMRLLQALAASGSESKKLMRENIPSRRSEVRLEGDA 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5568g00022 864 Gene3D Glycogen Phosphorylase B; 45 306 - -
Pral5568g00022 864 FunFam Trehalose-6-phosphate synthase 8 49 307 - -
Pral5568g00022 864 FunFam Alpha,alpha-trehalose-phosphate synthase 308 523 - -
Pral5568g00022 864 Gene3D Glycogen Phosphorylase B; 307 523 - -
Pral5568g00022 864 MobiDBLite consensus disorder prediction 844 864 - -
Pral5568g00022 864 MobiDBLite consensus disorder prediction 847 864 - -
Pral5568g00022 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 33 837 IPR001830 GO:0003824|GO:0005992
Pral5568g00022 864 CDD GT20_TPS 54 539 IPR001830 GO:0003824|GO:0005992
Pral5568g00022 864 CDD HAD_TPP 587 831 - -
Pral5568g00022 864 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 585 702 - -
Pral5568g00022 864 Pfam Glycosyltransferase family 20 54 539 IPR001830 GO:0003824|GO:0005992
Pral5568g00022 864 Gene3D - 586 687 IPR023214 -
Pral5568g00022 864 Gene3D - 718 850 IPR023214 -
Pral5568g00022 864 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 718 849 - -
Pral5568g00022 864 SUPERFAMILY HAD-like 586 837 IPR036412 -
Pral5568g00022 864 MobiDBLite consensus disorder prediction 18 48 - -
Pral5568g00022 864 Pfam Trehalose-phosphatase 589 826 IPR003337 GO:0003824|GO:0005992
Pral5568g00022 864 NCBIfam trehalose-phosphatase 584 837 IPR003337 GO:0003824|GO:0005992
Pral5568g00022 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 53 541 - -
Pral5568g00022 864 NCBIfam HAD-IIB family hydrolase 587 791 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5568g00022 Pral-Chr5568 164308 167247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5568g00022 1 861 Trehalose Biosynthesis Gene Families AT1G23870 57.719 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5568g00022 K16055 - qsa:O6P43_022731 1104.74