Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5568g00010 ATGAAGAACTTTCACAGCTTCAAACAGATTCCAACCCCCAAAAGGTCCGGAAGGAGGCTGTCGCTTGGGGAATACAGGCGAGCTGTGTCATGGTCCAAGTACTTGGTCTCTTCAGGGGCTGCCATAAAAGGAGAAGGAGAAGAGGAATGGAGTGCCGATCTGTCTCAGTTATTCATTGGATCCAAATTTGCTTCTGGAAGGCATAGTAAGCTCTACAGAGGCATTTACAAGCAAAAAGATGTGGCCATCAAGCTCATAAGCCAACCTGAGGAGGATGCCGACTTGGCTGCTTTGCTTGAAAAGCAATTCACTTCTGAAGTTGCTTTGCTCTTTCGTCTGCACCATCCAAACATCATCACTTTTTTTGCTGCTTGCAAGAAGCCTCCTGTGTTTTGTATAATTACTGAATATATGGCTGGAGGATCACTGAGAAGTTACCTGCATCAGCAACAACCAAATTCAGTTCCACTTAATCTGTTTCTGAAATTAGCCCTAGACATTGCAAGAGGGATGCAGTATCTTCATTCTGAAGGGGTGCTTCATAGGGATCTTAAATCAGAGAACCTATTGCTTGGGGAAGATATGTGTGTAAAAGTAGCAGATTTTGGAATCTCATGCTTAGAATCACAGATTGGTAGTGCAAAAGGATTCACAGGAACTTACCGTTGGATGGCGCCTGAAATGATCAAAGAAAAGCATCATACCAAGAAAGTAGATGTCTATAGCTTTGCCATAGTCCTATGGGAGCTCTTAACTGGACTGACTCCGTTTCACAACATGACCCCAGAACAGGCAGCATTTGCTGTCTCACACAAGAATGCAAGGCCGCCATTACCTGCTGATTGTCCAAAGGCATTTAGTCATCTCATAAACAGATGTTGGTCAGGAAATCCAGATAAAAGGCCACATTTTGATGAGATTGTTTCTATTTTGGAGATGTATAGTGAATCCCTTGAAGAAGATCCTGAGTTCTTTTCAACTTACAACCCACCGTCTTCTAAATCTGTTGTCATGAGATGCTTACCAAATTGTATTAGTAGCCATAGATCATCTTCTTGA 1059 0.4268 MKNFHSFKQIPTPKRSGRRLSLGEYRRAVSWSKYLVSSGAAIKGEGEEEWSADLSQLFIGSKFASGRHSKLYRGIYKQKDVAIKLISQPEEDADLAALLEKQFTSEVALLFRLHHPNIITFFAACKKPPVFCIITEYMAGGSLRSYLHQQQPNSVPLNLFLKLALDIARGMQYLHSEGVLHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWELLTGLTPFHNMTPEQAAFAVSHKNARPPLPADCPKAFSHLINRCWSGNPDKRPHFDEIVSILEMYSESLEEDPEFFSTYNPPSSKSVVMRCLPNCISSHRSSS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5568g00010 352 SUPERFAMILY Protein kinase-like (PK-like) 46 313 IPR011009 -
Pral5568g00010 352 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Pral5568g00010 352 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Pral5568g00010 352 Gene3D Transferase(Phosphotransferase) domain 1 140 337 - -
Pral5568g00010 352 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 313 - -
Pral5568g00010 352 CDD STKc_MAP3K-like 64 311 - -
Pral5568g00010 352 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5568g00010 352 SMART serkin_6 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5568g00010 352 Pfam Protein tyrosine and serine/threonine kinase 60 311 IPR001245 GO:0004672|GO:0006468
Pral5568g00010 352 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Pral5568g00010 352 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Pral5568g00010 352 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Pral5568g00010 352 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Pral5568g00010 352 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Pral5568g00010 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5568g00010 Pral-Chr5568 100466 103921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5568g00010 30 346 MAP Kinase Kinase Kinase AT1G62400 60.748 3.78e-140 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral5568g00010 PK_Tyr_Ser-Thr 3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5568g00010 - - tcc:18603894 603.979